| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF007L23 | Sequence | 522 | 001582 (16) | emb|CDP13338.1| | 6e-49 | unnamed protein product [Coffea canephora] | 689 | 001582 (16) | emb|CDP13338.1| | 4e-48 | unnamed protein product [Coffea canephora] |
| JMFF034O02 | Sequence | 485 | 001582 (16) | emb|CDP13338.1| | 4e-49 | unnamed protein product [Coffea canephora] | 670 | 001582 (16) | emb|CDP13338.1| | 2e-33 | unnamed protein product [Coffea canephora] |
| JMFF042E11 | Sequence | 643 | 001582 (16) | emb|CDP13338.1| | 2e-47 | unnamed protein product [Coffea canephora] | 619 | 001582 (16) | emb|CDP13338.1| | 1e-47 | unnamed protein product [Coffea canephora] |
| JMFN005K17 | Sequence | 626 | 001582 (16) | emb|CDP13338.1| | 2e-48 | unnamed protein product [Coffea canephora] | |||||
| JMFN013F02 | Sequence | 627 | 001582 (16) | emb|CDP13338.1| | 2e-48 | unnamed protein product [Coffea canephora] | |||||
| JMFS119F08 | Sequence | 624 | 001582 (16) | emb|CDP13338.1| | 2e-48 | unnamed protein product [Coffea canephora] | |||||
| JMSF021B08 | Sequence | 730 | 024168 | ref|XP_007031065.1| | 3e-22 | TOPLESS-related 3 isoform 2 [Theobroma cacao] gb|EOY11567.1| TOPLESS-related 3 i | 593 | 001582 (16) | emb|CDP13338.1| | 1e-48 | unnamed protein product [Coffea canephora] |
| JMSF024J18 | Sequence | 640 | 001582 (16) | emb|CDP13338.1| | 2e-48 | unnamed protein product [Coffea canephora] | 590 | 001582 (16) | emb|CDP13338.1| | 1e-48 | unnamed protein product [Coffea canephora] |
| JMSF034C10 | Sequence | 656 | 001582 (16) | emb|CDP13338.1| | 3e-48 | unnamed protein product [Coffea canephora] | 608 | 001582 (16) | emb|CDP13338.1| | 2e-48 | unnamed protein product [Coffea canephora] |
| JMSF051B02 | Sequence | 696 | 001582 (16) | emb|CDP13338.1| | 4e-48 | unnamed protein product [Coffea canephora] | 657 | 001582 (16) | emb|CDP13338.1| | 3e-48 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
rJMFF007L23- GTAGACATGAATTAGAATAATAGCATTCAACAGA
rJMFF034O02- ATAGCATTCAACAGA
JMFN005K17+ AGAATAATAGCATTCAACAGA
JMSF034C10+ TTAGAATAATAGCATTCAACAGA
JMSF024J18+ TAGACATGAATTAGAATAATAGCATTCAACAGA
JMFN013F02+ GTAGACATGAATTAGAATAATAGCATTCAACAGA
rJMFF042E11- GTAGACATGAATTAGAATAATAGCATTCAACAGA
JMSF051B02+ GCAAGTAGACATGAATTAGAATAATAGCATTCAACAGA
____________________________________________________________
consensus GCAAGTAGACATGAATTAGAATAATAGCATTCAACAGA
. : . : . : . : . : . :
rJMFF007L23- ATGTTTTCAACAATCAAACATGAGGATTTCAAATGCAACATCAAAATGAG-TAGAGGGTT
rJMFF034O02- ATGTTTTCAACAATCAAACATGAGGATTTCAAATGCAACATCAAAATGAG-TAGAGGGTT
JMFN005K17+ ATGTTTTCAACAATCAAACATGAGGATTTCAAATGCAACATCAAAATGAG-TAGAGGGTT
rJMSF021B08- ACATGAGGATTTCAAATGCAACATCAAAATGAG-TAGAGGGTT
rJMSF024J18- AACATGAGGATTTCAAATGCAACATCAAAATGAG-TAGAGGGTT
JMFS119F08+ ATGTTTTCAACAATCAAACATGAGGATTTCAAATGCAACATCAAAATGAG-TAGAGGGTT
JMSF034C10+ ATGTTTTCAACAATCAAACATGAGGATTTCAAATGCAACATCAAAATGAG-TAGAGGGTT
JMFF042E11+ CAACAATCAAACATGAGGATTTCAAATGCAACATCAAAATGAG-TAGAGGGTT
JMSF024J18+ ATGTTTTCAACAATCAAACATGAGGATTTCAAATGCAACATCAAAATGAG-TAGAGGGTT
JMFN013F02+ ATGTTTTCAACAATCAAACATGAGGATTTCAAATGCAACATCAAAATGAG-TAGAGGGTT
rJMSF051B02- GAGGATTTCAAATGCAACATCAAAATGAGTTAGAGGGTT
rJMFF042E11- ATGTTTTCAACAATCAAACATGAGGATTTCAAATGCAACATCAAAATGAG-TAGAGGGTT
rJMSF034C10- ACATGAGGATTTCAAATGCAACATCAAAATGAG-TAGAGGGTT
JMSF051B02+ ATGTTTTCAACAATCAAACATGAGGATTTCAAATGCAACATCAAAATGAG-TAGAGGGTT
____________________________________________________________
consensus ATGTTTTCAACAATCAAACATGAGGATTTCAAATGCAACATCAAAATGAG-TAGAGGGTT
. : . : . : . : . : . :
rJMFF007L23- GCTGCTTTCTCATTAGAGAAGGTGTATCACTGCATCTTTAACCGTACACAGCACAAAATT
rJMFF034O02- GCTGCCTTCTCATTAGAGAAGGTGTATCACTGCATCTTTAACCGTACACAGCACAAAATT
JMFN005K17+ GCTGCCTTCTCATTAGAGAAGGTGTATCACTGCATCTTTAACCGTACACAGCACAAAATT
rJMSF021B08- GCTGCCTTCTCATTAGAGAAGGTGTATCACTGCATCTTTAACCGTACACAGCACAAAATT
rJMSF024J18- GCTGCCTTCTCATTAGAGAAGGTGTATCACTGCATCTTTAACCGTACACAGCACAAAATT
JMFS119F08+ GCTGCCTTCTCATTAGAGAAGGTGTATCACTGCATCTTTAACCGTACACAGCACAAAATT
JMSF034C10+ GCTGCCTTCTCATTAGAGAAGGTGTATCACTGCATCTTTAACCGTACACAGCACAAAATT
JMFF042E11+ GCTGCCTTCTCATTAGAGAAGGTGTATCACTGCATCTTTAACCGTACACAGCACAAAATT
JMSF024J18+ GCTGCCTTCTCATTAGAGAAGGTGTATCACTGCATCTTTAACCGTACACAGCACAAAATT
JMFN013F02+ GCTGCCTTCTCATTAGAGAAGGTGTATCACTGCATCTTTAACCGTACACAGCACAAAATT
rJMSF051B02- GCTGCCTTCTCATTAGAGAAGGTGTATCACTGCATCTTTAACCGTACACAGCACAAAATT
rJMFF042E11- GCTGCCTTCTCATTAGAGAAGGTGTATCACTGCATCTTTAACCGTACACAGCACAAAATT
rJMSF034C10- GCTGCCTTCTCATTAGAGAAGGTGTATCACTGCATCTTTAACCGTACACAGCACAAAATT
JMSF051B02+ GCTGCCTTCTCATTAGAGAAGGTGTATCACTGCATCTTTAACCGTACACAGCACAAAATT
____________________________________________________________
consensus GCTGCCTTCTCATTAGAGAAGGTGTATCACTGCATCTTTAACCGTACACAGCACAAAATT
. : . : . : . : . : . :
rJMFF007L23- TATTCAATTCTAACTCTAACATTACACCATGTACGAAGAAAACCAAGACTCCATCATGTT
rJMFF034O02- TATTCAATTCTAACTCTAACATTACACCATGTACGAAGAAAACCAAGACTCCATCATGTT
JMFN005K17+ TATTCAATTCTAACTCTAACATTACACCATGTACGAAGAAAACCAAGACTCCATCATGTT
rJMSF021B08- TATTCAATTCTAACTCTAACATTACACCATGTACGAAGAAAACCAAGACTCCATCATGTT
rJMSF024J18- TATTCAATTCTAACTCTAACATTACACCATGTACGAAGAAAACCAAGACTCCATCATGTT
JMFS119F08+ TATTCAATTCTAACTCTAACATTACACCATGTACGAAGAAAACCAAGACTCCATCATGTT
JMSF034C10+ TATTCAATTCTAACTCTAACATTACACCATGTACGAAGAAAACCAAGACTCCATCATGTT
JMFF042E11+ TATTCAATTCTAACTCTAACATTACACCATGTACGAAGAAAACCAAGACTCCATCATGTT
JMSF024J18+ TATTCAATTCTAACTCTAACATTACACCATGTACGAAGAAAACCAAGACTCCATCATGTT
JMFN013F02+ TATTCAATTCTAACTCTAACATTACACCATGTACGAAGAAAACCAAGACTCCATCATGTT
rJMSF051B02- TATTCAATTCTAACTCTAACATTACACCATGTACGAAGAAAACCAAGACTCCATCATGTT
rJMFF042E11- TATTCAATTCTAACTCTAACATTACACCATGTACGAAGAAAACCAAGACTCCATCATGTT
rJMSF034C10- TATTCAATTCTAACTCTAACATTACACCATGTACGAAGAAAACCAAGACTCCATCATGTT
JMSF051B02+ TATTCAATTCTAACTCTAACATTACACCATGTACGAAGAAAACCAAGACTCCATCATGTT
JMFF034O02+ CCATCATGTT
JMFF007L23+ AACATTACACCATGTACGAAGAAAACCAAGACTCCATCATGTT
____________________________________________________________
consensus TATTCAATTCTAACTCTAACATTACACCATGTACGAAGAAAACCAAGACTCCATCATGTT
. : . : . : . : . : . :
rJMFF007L23- TCCTGCGAGCGATGAATAGCCAGCCCATAATCAATCTGGCTAGCTGCTACTTGTCTTCAT
rJMFF034O02- TCCTGCGAGCGATGAATAGCCAGCCCATAATCAATCTGGCTAGCTGCTACTTGTCTTCAT
JMFN005K17+ TCCTGCGAGCGATGAATAGCCAGCCCATAATCAATCTGGCTAGCTGCTACTTGTCTTCAT
rJMSF021B08- TCCTGCGAGCGATGAATAGCCAGCCCATAATCAATCTGGCTAGCTGCTACTTGTCTTCAT
rJMSF024J18- TCCTGCGAGCGATGAATAGCCAGCCCATAATCAATCTGGCTAGCTGCTACTTGTCTTCAT
JMFS119F08+ TCCTGCGAGCGATGAATAGCCAGCCCATAATCAATCTGGCTAGCTGCTACTTGTCTTCAT
JMSF034C10+ TCCTGCGAGCGATGAATAGCCAGCCCATAATCAATCTGGCTAGCTGCTACTTGTCTTCAT
JMFF042E11+ TCCTGCGAGCGATGAATAGCCAGCCCATAATCAATCTGGCTAGCTGCTACTTGTCTTCAT
JMSF024J18+ TCCTGCGAGCGATGAATAGCCAGCCCATAATCAATCTGGCTAGCTGCTACTTGTCTTCAT
JMFN013F02+ TCCTGCGAGCGATGAATAGCCAGCCCATAATCAATCTGGCTAGCTGCTACTTGTCTTCAT
rJMSF051B02- TCCTGCGAGCGATGAATAGCCAGCCCATAATCAATCTGGCTAGCTGCTACTTGTCTTCAT
rJMFF042E11- TCCTGCGAGCGATGAATAGCCAGCCCATAATCAATCTGGCTAGCTGCTACTTGTCTTCAT
rJMSF034C10- TCCTGCGAGCGATGAATAGCCAGCCCATAATCAATCTGGCTAGCTGCTACTTGTCTTCAT
JMSF051B02+ TCCTGCGAGCGATGAATAGCCAGCCCATAATCAATCTGGCTAGCTGCTACTTGTCTTCAT
JMFF034O02+ TCCTGCGAGCGATGAATAGCCAGCCCATAATCAATCTGGCTAGCTGCTACTTGTCTTCAT
JMFF007L23+ TCCTGCGAGCGATGAATAGCCAGCCCATAATCAATCTGGCTAGCTGCTACTTGTCTTCAT
____________________________________________________________
consensus TCCTGCGAGCGATGAATAGCCAGCCCATAATCAATCTGGCTAGCTGCTACTTGTCTTCAT
. : . : . : . : . : . :
rJMFF007L23- AATCACTTATCAGTTGAGCTAGAAGAGGAAGGAGCAGATGAGCCTTGGGCGTCCTGAATA
rJMFF034O02- AATCACTTATCAGTTGAGCTAGAAGAGGAAGGAGCAGATGAGCCTTGGGCGTCCTGAATA
JMFN005K17+ AATCACTTATCAGTTGAGCTAGAAGAGGAAGGAGCAGATGAGCCTTGGGCGTCCTGAATA
rJMSF021B08- AATCACTTATCAGTTGAGCTAGAAGAGGAAGGAGCAGATGAGCCTTGGGCGTCCTGAATA
rJMSF024J18- AATCACTTATCAGTTGAGCTAGAAGAGGAAGGAGCAGATGAGCCTTGGGCGTCCTGAATA
JMFS119F08+ AATCACTTATCAGTTGAGCTAGAAGAGGAAGGAGCAGATGAGCCTTGGGCGTCCTGAATA
JMSF034C10+ AATCACTTATCAGTTGAGCTAGAAGAGGAAGGAGCAGATGAGCCTTGGGCGTCCTGAATA
JMFF042E11+ AATCACTTATCAGTTGAGCTAGAAGAGGAAGGAGCAGATGAGCCTTGGGCGTCCTGAATA
JMSF024J18+ AATCACTTATCAGTTGAGCTAGAAGAGGAAGGAGCAGATGAGCCTTGGGCGTCCTGAATA
JMFN013F02+ AATCACTTATCAGTTGAGCTAGAAGAGGAAGGAGCAGATGAGCCTTGGGCGTCCTGAATA
rJMSF051B02- AATCACTTATCAGTTGAGCTAGAAGAGGAAGGAGCAGATGAGCCTTGGGCGTCCTGAATA
rJMFF042E11- AATCACTTATCAGTTGAGCTAGAAGAGGAAGGAGCAGATGAGCCTTGGGCGTCCTGAATA
rJMSF034C10- AATCACTTATCAGTTGAGCTAGAAGAGGAAGGAGCAGATGAGCCTTGGGCGTCCTGAATA
JMSF051B02+ AATCACTTATCAGTTGAGCTAGAAGAGGAAGGAGCAGATGAGCCTTGGGCGTCCTGAATA
JMFF034O02+ AATCACTTATCAGTTGAGCTAGAAGAGGAAGGAGCAGATGAGCCTTGGGCGTCCTGAATA
JMFF007L23+ AATCACTTATCAGTTGAGCTAGAAGAGGAAGGAGCAGATGAGCCTTGGGCGTCCTGAATA
____________________________________________________________
consensus AATCACTTATCAGTTGAGCTAGAAGAGGAAGGAGCAGATGAGCCTTGGGCGTCCTGAATA
. : . : . : . : . : . :
rJMFF007L23- AGGTCATCGTAGGGATCACGGCGGCCTGGAGCTTGACTGATCTTAGAATCCCAAAAGATC
rJMFF034O02- AGGTCATCGTAGGGATCACGGCGGCCTGGAGCTTGACTGATCTTAGAATCCCAAAAGATC
JMFN005K17+ AGGTCATCGTAGGGATCACGGCGGCCTGGAGCTTGACTGATCTTAGAATCCCAAAAGATC
rJMSF021B08- AGGTCATCGTAGGGATCACGGCGGCCTGGAGCTTGACTGATCTTAGAATCCCAAAAGATC
rJMSF024J18- AGGTCATCGTAGGGATCACGGCGGCCTGGAGCTTGACTGATCTTAGAATCCCAAAAGATC
JMFS119F08+ AGGTCATCGTAGGGATCACGGCGGCCTGGAGCTTGACTGATCTTAGAATCCCAAAAGATC
JMSF034C10+ AGGTCATCGTAGGGATCACGGCGGCCTGGAGCTTGACTGATCTTAGAATCCCAAAAGATC
JMFF042E11+ AGGTCATCGTAGGGATCACGGCGGCCTGGAGCTTGACGGATCTTAGAATCCCAAAAGATC
JMSF024J18+ AGGTCATCGTAGGGATCACGGCGGCCTGGAGCTTGACTGATCTTAGAATCCCAAAAGATC
JMFN013F02+ AGGTCATCGTAGGGATCACGGCGGCCTGGAGCTTGACTGATCTTAGAATCCCAAAAGATC
rJMSF051B02- AGGTCATCGTAGGGATCACGGCGGCCTGGAGCTTGACTGATCTTAGAATCCCAAAAGATC
rJMFF042E11- AGGTCATCGTAGGGATCACGGCGGCCTGGAGCTTGACGGATCTTAGAATCCCAAAAGATC
rJMSF034C10- AGGTCATCGTAGGGATCACGGCGGCCTGGAGCTTGACTGATCTTAGAATCCCAAAAGATC
JMSF051B02+ AGGTCATCGTAGGGATCACGGCGGCCTGGAGCTTGACTGATCTTAGAATCCCAAAAGATC
JMFF034O02+ AGGTCATCGTAGGGATCACGGCGGCCTGGAGCTTGACTGATCTTAGAATCCCAAAAGATC
JMFF007L23+ AGGTCATCGTAGGGATCACGGCGGCCTGGAGCTTGACTGATCTTAGAATCCCAAAAGATC
____________________________________________________________
consensus AGGTCATCGTAGGGATCACGGCGGCCTGGAGCTTGACTGATCTTAGAATCCCAAAAGATC
. : . : . : . : . : . :
rJMFF007L23- TGAGCGTTGTGACGGTCAAAAGTCCAGAAACCGTACGGACGCAGAGGAAGGTTCCACATC
rJMFF034O02- TGAGCGTTGTGACGGTCAAAAGTCCAGAAACCGTACGGACGCAGAGGAAGGTTCCACATC
JMFN005K17+ TGAGCGTTGTGACGGTCAAAAGTCCAGAAACCGTACGGACGCAGAGGAAGGTTCCACATC
rJMSF021B08- TGAGCGTTGTGACGGTCAAAAGTCCAGAAACCGTACGGACGCAGAGGAAGGTTCCACATC
rJMSF024J18- TGAGCGTTGTGACGGTCAAAAGTCCAGAAACCGTACGGACGCAGAGGAAGGTTCCACATC
JMFS119F08+ TGAGCGTTGTGACGGTCAAAAGTCCAGAAACCGTACGGACGCAGAGGAAGGTTCCACATC
JMSF034C10+ TGAGCGTTGTGACGGTCAAAAGTCCAGAAACCGTACGGACGCAGAGGAAGGTTCCACATC
JMFF042E11+ TGAGCGTTGTGACGGTCAAAAGTCCAGAAACCGTACGGACGCAGAGGAAGGTTCCACATC
JMSF024J18+ TGAGCGTTGTGACGGTCAAAAGTCCAGAAACCGTACGGACGCAGAGGAAGGTTCCACATC
JMFN013F02+ TGAGCGTTGTGACGGTCAAAAGTCCAGAAACCGTACGGACGCAGAGGAAGGTTCCACATC
rJMSF051B02- TGAGCGTTGTGACGGTCAAAAGTCCAGAAACCGTACGGACGCAGAGGAAGGTTCCACATC
rJMFF042E11- TGAGCGTTGTGACGGTCAAAAGTCCAGAAACCGTACGGACGCAGAGGAAGGTTCCACATC
rJMSF034C10- TGAGCGTTGTGACGGTCAAAAGTCCAGAAACCGTACGGACGCAGAGGAAGGTTCCACATC
JMSF051B02+ TGAGCGTTGTGACGGTCAAAAGTCCAGAAACCGTACGGACGCAGAGGAAGGTTCCACATC
JMFF034O02+ TGAGCGTTGTGACGGTCAAAAGTCCAGAAACCGTACGGACGCAGAGGAAGGTTCCACATC
JMFF007L23+ TGAGCGTTGTGACGGTCAAAAGTCCAGAAACCGTACGGACGCAGAGGAAGGTTCCACATC
____________________________________________________________
consensus TGAGCGTTGTGACGGTCAAAAGTCCAGAAACCGTACGGACGCAGAGGAAGGTTCCACATC
. : . : . : . : . : . :
rJMFF007L23- TCCTTCGTCTTGTTGCACTTATCCTTCAAT-GTGTAGAGATGTTCTCTAAACTTCCGATC
rJMFF034O02- TCCTTCGTCTTGTTGCACTTATCCTTCAATGGTGTAGAGATGTTCTCTAAACTTCCGATC
JMFN005K17+ TCCTTCGTCTTGTTGCACTTATCCTTCAAT-GTGTAGAGATGTTCTCTAAACTTCCGATC
rJMSF021B08- TCCTTCGTCTTGTTGCACTTATCCTTCAAT-GTGTAGAGATGTTCTCTAAACTTCCGATC
rJMSF024J18- TCCTTCGTCTTGTTGCACTTATCCTTCAAT-GTGTAGAGATGTTCTCTAAACTTCCGATC
JMFS119F08+ TCCTTCGTCTTGTTGCACTTATCCTTCAAT-GTGTAGAGATGTTCTCTAAACTTCCGATC
JMSF034C10+ TCCTTCGTCTTGTTGCACTTATCCTTCAAT-GTGTAGAGATGTTCTCTAAACTTCCGATC
JMFF042E11+ TCCTTCGTCTTGTTGCACTTATCCTTCAAT-GTGTAGAGATGTTCTCTAAACTTCCGATC
JMSF024J18+ TCCTTCGTCTTGTTGCACTTATCCTTCAAT-GTGTAGAGATGTTCTCTAAACTTCCGATC
JMFN013F02+ TCCTTCGTCTTGTTGCACTTATCCTTCAAT-GTGTAGAGATGTTCTCTAAACTTCCGATC
rJMSF051B02- TCCTTCGTCTTGTTGCACTTATCCTTCAAT-GTGTAGAGATGTTCTCTAAACTTCCGATC
rJMFF042E11- TCCTTCGTCTTGTTGCACTTATCCTTCAAT-GTGTAGAGATGTTCTCTAAACTTCCGATC
rJMSF034C10- TCCTTCGTCTTGTTGCACTTATCCTTCAAT-GTGTAGAGATGTTCTCTAAACTTCCGATC
JMSF051B02+ TCCTTCGTCTTGTTGCACTTATCCTTCAAT-GTGTAGAGATGTTCTCTAAACTTCCGATC
JMFF034O02+ TCCTTCGTCTTGTTGCACTTATCCTTCAAT-GTGTAGAGATGTTCTCTAAACTTCCGATC
JMFF007L23+ TCCTTCGTCTTGTTGCACTTATCCTTCAAT-GTGTAGAGATGTTCTCTAAACTTCCGATC
____________________________________________________________
consensus TCCTTCGTCTTGTTGCACTTATCCTTCAAT-GTGTAGAGATGTTCTCTAAACTTCCGATC
. : . : . : . : . : . :
rJMFF007L23- CCTCTCCTTCGGATCCTCCATCATCCTCAGGATCAAGTTCTCCGCGAATTCCATAACAAA
rJMFF034O02- CCTCTCCTTCGGATCCTCCATCATCCTCAGGATCAAGTTCTCCGCGAATTCCATAACAAA
JMFN005K17+ CCTCTCCTTCGGATCCTCCATCATCCTCAGGATCAAGTTCTCCGCGAATTCCATAACAAA
rJMSF021B08- CCTCTCCTTCGGATCCTCCATCATCCTCAGGATCAAGTTCTCCGCGAATTCCATAACAAA
rJMSF024J18- CCTCTCCTTCGGATCCTCCATCATCCTCAGGATCAAGTTCTCCGCGAATTCCATAACAAA
JMFS119F08+ CCTCTCCTTCGGATCCTCCATCATCCTCAGGATCAAGTTCTCCGCGAATTCCATAACAAA
JMSF034C10+ CCTCTCCTTCGGATCCTCCATCATCCTCAGGATCAAGTTCTCCGCGAATTCCATAACAAA
JMFF042E11+ CCTCTCCTTCGGATCCTCCATCATCCTCAGGATCAAGTTCTCCGCGAATTCCATAACAAA
JMSF024J18+ CCTCTCCTTCGGATCCTCCATCATCCTCAGGATCAAGTTCTCCGCGAATTCCATAACAAA
JMFN013F02+ CCTCTCCTTCGGATCCTCCATCATCCTCAGGATCAAGTTCTCCGCGAATTCCATAACAAA
rJMSF051B02- CCTCTCCTTCGGATCCTCCATCATCCTCAGGATCAAGTTCTCCGCGAATTCCATAACAAA
rJMFF042E11- CCTCTCCTTCGGATCCTCCATCATCCTCAGGATCAAGTTCTCCGCGAATTCCATAACAAA
rJMSF034C10- CCTCTCCTTCGGATCCTCCATCATCCTCAGGATCAAGTTCTCCGCGAATTCCATAACAAA
JMSF051B02+ CCTCTCCTTCGGATCCTCCATCATCCTCAGGATCAAGTTCTCCGCGAATTCCATAACAAA
JMFF034O02+ CCTCTCCTTCGGATCCTCCATCATCCTCAGGATCAAGTTCTCCGCGAATTCCATAACAAA
JMFF007L23+ CCTCTCCTTCGGATCCTCCATCATCCTCAGGATCAAGTTCTCCGCGAATTCCATAACAAA
____________________________________________________________
consensus CCTCTCCTTCGGATCCTCCATCATCCTCAGGATCAAGTTCTCCGCGAATTCCATAACAAA
. : . : . : . : . : . :
rJMFF007L23- CTTCATTTTCTCCTGATCAAAATTAACTCCTCACAAATGCAGCAAACCCTTCTTCGATGA
rJMFF034O02- CTTCATTTTCTCCTGATCAAAATTAACTCCTCACAAATGCAGCAAACCCTTCTTCGATGA
JMFN005K17+ CTTCATTTTCTCCTGATCAAAATTAACTCCTCACAAATGCAGCAAACCCTTCTTCGATGA
rJMSF021B08- CTTCATTTTCTCCTGATCAAAATTAACTCCTCACAAATGCAGCAAACCCTTCTTCGATGA
rJMSF024J18- CTTCATTTTCTCCTGATCAAAATTAACTCCTCACAAATGCAGCAAACCCTTCTTCGATGA
JMFS119F08+ CTTCATTTTCTCCTGATCAAAATTAACTCCTCACAAATGCAGCAAACCCTTCTTCGATGA
JMSF034C10+ CTTCATTTTCTCCTGATCAAAATTAACTCCTCACAAATGCAGCAAACCCTTCTTCGATGA
JMFF042E11+ CTTCATTTTCTCCTGATCAAAATTAACTCCTCACAAATGCAGCAAACCCTTCTTCGATGA
JMSF024J18+ CTTCATTTTCTCCTGATCAAAATTAACTCCTCACAAATGCAGCAAACCCTTCTTCGATGA
JMFN013F02+ CTTCATTTTCTCCTGATCAAAATTAACTCCTCACAAATGCAGCAAACCCT
rJMSF051B02- CTTCATTTTCTCCTGATCAAAATTAACTCCTCACAAATGCAGCAAACCCTTCTTCGATGA
rJMFF042E11- CTTCATTTTCTCCTGATCAAAATTAACTCCTCACAAATGCAGC
rJMSF034C10- CTTCATTTTCTCCTGATCAAAATTAACTCCTCACAAATGCAGCAAACCCTTCTTCGATGA
JMSF051B02+ CTTCATTTTCTCCTGATCAAAATTAACTCCTCACAAATGCAGCAAACCCTTCTTCGATGA
JMFF034O02+ CTTCATTTTCTCCTGATCAAAATTAACTCCTCACAAATGCAGCAAACCCTTCTTCGATGA
JMFF007L23+ CTTCATTTTCTCCTGATCAAAATTAACTCCTCACAAATGCAGCAAACCCTTCTTCGATGA
____________________________________________________________
consensus CTTCATTTTCTCCTGATCAAAATTAACTCCTCACAAATGCAGCAAACCCTTCTTCGATGA
. : . : . : . : . : . :
rJMFF007L23- CGATTGCGACTGTGACTGATTAGAGCGGAGCTCGGGAAATCACAGAGCTTTCAGATA
rJMFF034O02- CGATTGCGACTGTGACTGATTAGAGCGGAGCTCGGGAAATCACAGAGCTTTCAGAT
JMFN005K17+ CGATTGC
rJMSF021B08- CGATTGCGACTG
rJMSF024J18- CGATTGC
JMFS119F08+ CGATTGCGACTGTGACTGATTAGAGC
JMSF034C10+ CGATTGCGACTGTGACTGATTAGAGC
JMFF042E11+ CGATTGCGACTGTGACTGATTAGAGCGGAGCTCGGGAAATCACAGAGCTTTC
JMSF024J18+ CGATTGC
rJMSF051B02- CGATTGCGACTGTGACTGATTAGAGCGGAGCTCGGGAAATCACAGAGCTTTCAGATA
rJMSF034C10- CGATTGCGACTGTGACTGATTAGAGC
JMSF051B02+ CGATTGCGACTGTGACTGATTAGAGCGGAGCTCGGGAAATCACAGAGCTTTCAGATA
JMFF034O02+ CGATTGCGACTGTGACTGATTAGAGCGGAGCTCGGGAAATCACAGAGCTTTCAGAT
JMFF007L23+ CGATTGCGACTGTGACTGATTAGAGCGGAGCTCGGGAAATCACAGAGCTTTCAGATACCT
____________________________________________________________
consensus CGATTGCGACTGTGACTGATTAGAGCGGAGCTCGGGAAATCACAGAGCTTTCAGATACCT