| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF006H11 | Sequence | 510 | 001576 (7) | 762 | 001576 (7) | ref|XP_009765168.1| | 2e-101 | PREDICTED: septum-promoting GTP-binding protein 1-like [Nicotiana sylvestris] | |||
| JMFF033A11 | Sequence | 553 | 001576 (7) | ref|XP_004251514.1| | 2e-04 | PREDICTED: septum-promoting GTP-binding protein 1 [Solanum lycopersicum] | 733 | 001576 (7) | ref|XP_009619232.1| | 1e-95 | PREDICTED: septum-promoting GTP-binding protein 1-like [Nicotiana tomentosiform |
| JMSF011M23 | Sequence | 372 | 001576 (7) | ref|XP_009766039.1| | 5e-15 | PREDICTED: septum-promoting GTP-binding protein 1-like [Nicotiana sylvestris] | 734 | 001576 (7) | ref|XP_009765168.1| | 1e-96 | PREDICTED: septum-promoting GTP-binding protein 1-like [Nicotiana sylvestris] |
| JMSF042N08 | Sequence | 730 | 001576 (7) | ref|XP_006351960.1| | 7e-68 | PREDICTED: septum-promoting GTP-binding protein 1-like [Solanum tuberosum] | 356 | 016176 | ref|XP_009589010.1| | 7e-22 | PREDICTED: septum-promoting GTP-binding protein 1-like [Nicotiana tomentosiform |
This contig is upended
. : . : . : . : . : . :
rJMFF033A11- ATGGAGTTCAAGACTATTGCCCCTAACCTGAAAGAAACTCCATC
rJMSF011M23- CCCTAACCTGAAAGAAACTCCATC
rJMFF006H11- GAGTTCAAGACTATTGCCCCTAACCTGAAAGAAACTCCATC
____________________________________________________________
consensus ATGGAGTTCAAGACTATTGCCCCTAACCTGAAAGAAACTCCATC
. : . : . : . : . : . :
rJMFF033A11- GTGAAAAAAAACGAAATGAAAACAACCCGAATCGCTGGACATGCTACATTTACTGGTCTC
rJMSF011M23- GTGAAAAAAAACGAAATGAAAACAACCCGAATCGCTGGACATGCTACATTTACTGGTCTC
rJMFF006H11- GTGAAAAAAAACGAAATGAAAACAACCCGAATCGCTGGACATGCTACATTTACTGGTCTC
____________________________________________________________
consensus GTGAAAAAAAACGAAATGAAAACAACCCGAATCGCTGGACATGCTACATTTACTGGTCTC
. : . : . : . : . : . :
rJMFF033A11- ACTGACTAATCTAGCGACTGGTTGACAGTGTAAATTATTCTGCAGGGAAATAAATGGCGT
rJMSF011M23- ACTGACTAATCTAGCGACTGGTTGACAGTGTAAATTATTCTGCAGGGAAATAAATGGCGT
rJMFF006H11- ACTGACTAATCTAGCGACTGGTTGACAGTGTAAATTATTCTGCAGGGAAATAAATGGCGT
____________________________________________________________
consensus ACTGACTAATCTAGCGACTGGTTGACAGTGTAAATTATTCTGCAGGGAAATAAATGGCGT
. : . : . : . : . : . :
rJMFF033A11- GTTTATCTACAATGACACCAAATGGGATGGTGGAGATGAGGCCTAGTAATCAATCATGGG
rJMSF011M23- GTTTATCTACAATGACACCAAATGGGATGGTGGAGATGAGGCCTAGTAATCAATCATGGG
rJMFF006H11- GTTTATCTACAATGACACCAAATGGGATGGTGGAGATGAGGCCTAGTAATCAATCATGGG
____________________________________________________________
consensus GTTTATCTACAATGACACCAAATGGGATGGTGGAGATGAGGCCTAGTAATCAATCATGGG
. : . : . : . : . : . :
rJMFF033A11- TTCTCCCACCGTCAGATTCCTCTCCACTTTCCATGGCAAGTTGAAGAGCTTCGCTGTGAC
rJMSF011M23- TTCTCCCACCGTCAGATTCCTCTCCACTTTCCATGGCAAGTTGAAGAGCTTCGCTGTGAC
rJMFF006H11- TTCTCCCACCGTCAGATTCCTCTCCACTTTCCATGGCAAGTTGAAGAGCTTCGCTGTGAC
____________________________________________________________
consensus TTCTCCCACCGTCAGATTCCTCTCCACTTTCCATGGCAAGTTGAAGAGCTTCGCTGTGAC
. : . : . : . : . : . :
rJMFF033A11- AAACTTGAAGATCTTATTCACATTGATGTTGTAGGTTGCACTAGAGAAGAACAAGGTAGC
rJMSF011M23- AAACTTGAAGATCTTATTCACATTGATGTTGTAGGTTGCACTAGAGAAGAACAAGGTAGC
rJMFF006H11- AAACTTGAAGATCTTATTCACATTGATGTTGTAGGTTGCACTAGAGAAGAACAAGGTAGC
____________________________________________________________
consensus AAACTTGAAGATCTTATTCACATTGATGTTGTAGGTTGCACTAGAGAAGAACAAGGTAGC
. : . : . : . : . : . :
rJMFF033A11- ATTCAGTGCCTTTGCATATGCTCTTGCCTCACTAGCAATTGTCCACTGCAAATCTAAAGG
rJMSF011M23- ATTCAGTGCCTTTGCATATGCTCTTGCCTCACTAGCAATTGTCCACTGCAAATCTAAAGG
rJMFF006H11- ATTCAGTGCCTTTGCATATGCTCTTGCCTCACTAGCAATTGTCCACTGCAAATCTAAAGG
____________________________________________________________
consensus ATTCAGTGCCTTTGCATATGCTCTTGCCTCACTAGCAATTGTCCACTGCAAATCTAAAGG
. : . : . : . : . : . :
rJMFF033A11- CAGTTCGACGAAATCATCAAACTTTGTCCCAATCATCACAGGAATTGCTGCCTGATTCCA
rJMSF011M23- CAGTTCGACGAAATCATCAAACTTTGTCCCAATCATCACAGGAATTGCTGCCTGATTCCA
rJMFF006H11- CAGTTCGACGAAATCATCAAACTTTGTCCCAATCATCACAGGAATTGCTGCCTGATTCCA
JMSF042N08+ ATCATCAAACTTTGTCCCAATCATCACAGGAATTGCTGCCTGATTCCA
____________________________________________________________
consensus CAGTTCGACGAAATCATCAAACTTTGTCCCAATCATCACAGGAATTGCTGCCTGATTCCA
. : . : . : . : . : . :
rJMFF033A11- TCTTCTGGCTTGTTGGAACCACCCTAAAATACTATTGAGGGTGCACCTACTAGTGAGATC
rJMSF011M23- TCTTCTGGCTTGTTGGAACCACCCTAAAATACTATTGAGGGTGCACCTACTAGTGAGATC
rJMFF006H11- TCTTCTGGCTTGTTGGAACCACCCTAAAATACTATTGAGGGTGCACCTACTAGTGAGATC
JMSF042N08+ TCTTCTGGCTTGTTGGAACCACCCTAAAATACTATTGAGGGTGCACCTACTAGTGAGATC
____________________________________________________________
consensus TCTTCTGGCTTGTTGGAACCACCCTAAAATACTATTGAGGGTGCACCTACTAGTGAGATC
. : . : . : . : . : . :
rJMFF033A11- AAACATGAACAACATGGCAACAGAGTCTTTACAAGCAGCACGAATATGGTACTGAGATGA
rJMSF011M23- AAACATGAACAACATGGCAACAGAGTCTTTACAAGCAGCACGAATATGGTACTGAGATGA
rJMFF006H11- AAACATGAACAACATGGCAACAGAGTCTTTACAAGCAGCACGAATATGGTACTGAGATGA
JMSF042N08+ AAACATGAACAACATGGCAACAGAGTCTTTACAAGCAGCACGAATATGGTACTGAGATGA
____________________________________________________________
consensus AAACATGAACAACATGGCAACAGAGTCTTTACAAGCAGCACGAATATGGTACTGAGATGA
. : . : . : . : . : . :
rJMFF033A11- AAAATCTGTG------------CCTTCTACTTCCCAGATGTTGTAAGATATCTGAGCCCC
rJMSF011M23- AAAATCTGTGCCATTACCATTACCTTCTACTTCCCAGATGTTGTAAGATATCTGAGCCCC
rJMFF006H11- AAAATCTGTG------------CCTTCTACTTCCCAGATGTTGTAAGATATCTGAGCCCC
JMSF042N08+ AAAATCTGTG------------CCTTCTACTTCCCAGATGTTGTAAGATATCTGAGCCCC
____________________________________________________________
consensus AAAATCTGTG------------CCTTCTACTTCCCAGATGTTGTAAGATATCTGAGCCCC
. : . : . : . : . : . :
rJMFF033A11- TTTGACATTAATTGTCTTATCCATCTGATTCAATCCATTTCTTGAAATCCCTGCCTTCCC
rJMSF011M23- TTTGACATTAATTGTCTTATCCATCTGATTCAATCCATTTCTTGAAATCCCTGCCTTCCC
rJMFF006H11- TTTGACATTAATTGTCTTATCCATCTGATTCAATCCATTTCTTGAAATCCCTGCCTTCCC
JMSF042N08+ TTTGACATTAATTGTCTTATCCATCTGATTCAATCCATTTCTTGAAATCCCTGCCTTCCC
____________________________________________________________
consensus TTTGACATTAATTGTCTTATCCATCTGATTCAATCCATTTCTTGAAATCCCTGCCTTCCC
. : . : . : . : . : . :
rJMFF033A11- TTTCTCTTTCCCTACGTACTTGGTCAGAAAACTGGTCTTGC
rJMSF011M23- TTTCTCTTTCCCTACGTACTTGGTCAGAAAACTGGTCTTGCCANTTTGGT
rJMFF006H11- TTTCTCTTTCCCTACGTACTTGGTCAGAAAACTGGTCTTGCCAATTTGGTTATCGCCCA
JMSF011M23+ TTGCCAATTTGGTTATCGCCCAA
JMSF042N08+ TTTCTCTTTCCCTACGTACTTGGTCAGAAAACTGGTCTTGCCAATTTGGTTATCGCCCAA
____________________________________________________________
consensus TTTCTCTTTCCCTACGTACTTGGTCAGAAAACTGGTCTTGCCAATTTGGTTATCGCCCAA
. : . : . : . : . : . :
JMSF011M23+ GAGGCTAATCTTCAAGGCGACCAAATCGGAGGCGTCCTTGTCGAGATCGAAGCGGGGCGG
JMSF042N08+ GAGGCTAATCTTCAAGGCGACCAAATCGGAGGCGTCCTTGTCGAGATCGAAGCGGGGCGG
JMFF033A11+ CGAAGCGGGGCGG
____________________________________________________________
consensus GAGGCTAATCTTCAAGGCGACCAAATCGGAGGCGTCCTTGTCGAGATCGAAGCGGGGCGG
. : . : . : . : . : . :
JMSF011M23+ GTCGGAGGCGGAGGCGGAGAAGCTGCATTCGACGGCGGCGTCGCGCGGCAGGGAGACCGC
JMSF042N08+ GTCGGAGGCGGAGGCGGAGAAGCTGCATTCGACGGCGGCGTCGCGCGGCAGGGAGACCGC
JMFF033A11+ GTCGGAGGCGGAGGCGGAGAAGCTGCATTCGACGGCGGCGTCGCGCGGCAGGGAGACCGC
JMFF006H11+ GACGGCGGCGTCGCGCGGCAGGGAGACCGC
____________________________________________________________
consensus GTCGGAGGCGGAGGCGGAGAAGCTGCATTCGACGGCGGCGTCGCGCGGCAGGGAGACCGC
. : . : . : . : . : . :
JMSF011M23+ AGGGGGTATCACGGCGGAGGCGGCGGATGTGGTGCGGGGCAACTGGCGGTACTTGGCGGA
JMSF042N08+ AGGGGGTATCACGGCGGAGGCGGCGGATGTGGTGCGGGGCAACTGGCGGTACTTGGCGGA
JMFF033A11+ AGGGGGTATCACGGCGGAGGCGGCGGATGTGGTGCGGGGCAACTGGCGGTACTTGGCGGA
JMFF006H11+ AGGGGGTATCNCGGCGGAGGCGGCGGATGTGGTGCGGGGCAACTGGCGGTACTTGGCGGA
____________________________________________________________
consensus AGGGGGTATCACGGCGGAGGCGGCGGATGTGGTGCGGGGCAACTGGCGGTACTTGGCGGA
. : . : . : . : . : . :
JMSF011M23+ CTTGTGAACCCGGCGAGCAAGGATTTGTCGCCAGAGGCGAGTGAGGTATTTCTGCAGAAT
JMSF042N08+ CTTGTGAACCCGGCGAGCAAGGATTTGTCGCCAGAGGCGAGTGAGGTATTTCTGCAGAAT
JMFF033A11+ CTTGTGAACCCGGCGAGCAAGGATTTGTCGCCAGAGGCGAGTGAGGTATTTCTGCAGAAT
JMFF006H11+ CTTGTGAACCCGGCGAGCAAGGATTTGTCGCCAGAGGCGAGTGAGGTATTTNTGCAGAAT
____________________________________________________________
consensus CTTGTGAACCCGGCGAGCAAGGATTTGTCGCCAGAGGCGAGTGAGGTATTTCTGCAGAAT
. : . : . : . : . : . :
JMSF011M23+ TGAGGTCCTCAACAGAAGTTTTCTCTTCACGCTGAGATGAGCCATCGTCGTCGGCGGCGG
JMSF042N08+ TGAGGTCCTCAACAGAAGTTTTCTCTTCACGCTGAGATGAGCCATCGTCGTCGGCGGCGG
JMFF033A11+ TGAGGTCCTCAACAGAAGTTTTCTCTTCACGCTGAGATGAGCCATCGTCGTCGGCGGCGG
JMFF006H11+ TGAGGTCCTCAACAGAAGTTTTNTNTTCACGCTGAGATGAGCCATCGTCGTCGGCGGCGG
____________________________________________________________
consensus TGAGGTCCTCAACAGAAGTTTTCTCTTCACGCTGAGATGAGCCATCGTCGTCGGCGGCGG
. : . : . : . : . : . :
JMSF011M23+ CGGTCGTCTTCTTCAATCAATCTTTTTGTTCTTTATGCCAACAACAAC
JMSF042N08+ CGGTCGTCTTCTTCAATCAATCTTTTTGTTCTTTATGCCAACAACAACAACAACAACATC
JMFF033A11+ CGGTCGTCTTCTTCAATCAATCTTTTTGTTCTTTATGCCAACAACAACAACAACAACATC
JMFF006H11+ CGGTCGTNTTNTTCAATCAATCTTTTTGTTCTTTATGCCAACAACAACAACAACAACATC
____________________________________________________________
consensus CGGTCGTCTTCTTCAATCAATCTTTTTGTTCTTTATGCCAACAACAACAACAACAACATC
. : . : . : . : . : . :
JMSF042N08+ AATAACAACACAACAACAAAGTTGGTGGTACC
JMFF033A11+ AATAACAACACAACAACAAAGTTGGTGGTACCTACTCACACATCTTTATCTTTATGCTAT
JMFF006H11+ AATAACAACACAACAACAAAGTTGGTGGTACCTACTCACACATCTTTATCTTTATGCTAT
____________________________________________________________
consensus AATAACAACACAACAACAAAGTTGGTGGTACCTACTCACACATCTTTATCTTTATGCTAT
. : . : . : . : . : . :
JMFF033A11+ ATATACGTGGCTTTACGGATACAGAACAAGAAGAAGAAGAAGAAGAAAAAAAAAGGTAGA
JMFF006H11+ ATATACGTGGCTTTACGGATACAGAACAAGAAGAAGAAGAAGAAGAAAAAAAAAGGTAGA
____________________________________________________________
consensus ATATACGTGGCTTTACGGATACAGAACAAGAAGAAGAAGAAGAAGAAAAAAAAAGGTAGA
. : . : . : . : . : . :
JMFF033A11+ AATTAGTTACGGCCTCCTCAACCTCTAGCTTCTTGCCTTCGCCATGAAAGTAGTAATGGT
JMFF006H11+ AATTAGTTACGGCCTCCTCAACCTCTAGCTTCTTGCCTTCGCCATGAAAGTAGTAATGGT
____________________________________________________________
consensus AATTAGTTACGGCCTCCTCAACCTCTAGCTTCTTGCCTTCGCCATGAAAGTAGTAATGGT
. : . : . : . : . : . :
JMFF033A11+ GACAGGATCTCTCTCATCTTTTGTAGAGAATATTTGAATTTATTTTGATCGTCATTAATT
JMFF006H11+ GACAGGATCTCTCTCATCTTTTGTAGAGAATATTTGAATTTATTTTGATCGTCATTAATT
____________________________________________________________
consensus GACAGGATCTCTCTCATCTTTTGTAGAGAATATTTGAATTTATTTTGATCGTCATTAATT