| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF006E01 | Sequence | 574 | 001574 (8) | emb|CDO98898.1| | 5e-27 | unnamed protein product [Coffea canephora] | 636 | 012358 (8) | gb|KDO75101.1| | 4e-64 | hypothetical protein CISIN_1g0050432mg, partial [Citrus sinensis] gb|KDO75102.1| |
| JMFF033E09 | Sequence | 477 | 001574 (8) | emb|CDO98898.1| | 2e-19 | unnamed protein product [Coffea canephora] | 728 | 012358 (8) | ref|XP_009759318.1| | 4e-80 | PREDICTED: tip elongation aberrant protein 3-like [Nicotiana sylvestris] |
| JMFS014E04 | Sequence | 615 | 001574 (8) | emb|CDO98898.1| | 3e-38 | unnamed protein product [Coffea canephora] | |||||
| JMSF011E13 | Sequence | 400 | 001574 (8) | ref|XP_011090921.1| | 7e-46 | PREDICTED: acyl-CoA-binding domain-containing protein 4 [Sesamum indicum] ref|X | 783 | 012358 (8) | ref|XP_009759318.1| | 4e-87 | PREDICTED: tip elongation aberrant protein 3-like [Nicotiana sylvestris] |
| JMSF016O01 | Sequence | 337 | 001574 (8) | emb|CDO98898.1| | 9e-19 | unnamed protein product [Coffea canephora] | 781 | 012358 (8) | ref|XP_009759318.1| | 4e-88 | PREDICTED: tip elongation aberrant protein 3-like [Nicotiana sylvestris] |
| JMSF030K01 | Sequence | 593 | 001574 (8) | ref|XP_011090921.1| | 1e-43 | PREDICTED: acyl-CoA-binding domain-containing protein 4 [Sesamum indicum] ref|X | 692 | 012358 (8) | ref|XP_009759318.1| | 6e-80 | PREDICTED: tip elongation aberrant protein 3-like [Nicotiana sylvestris] |
| JMSF038E04 | Sequence | 677 | 001574 (8) | ref|XP_009770759.1| | 3e-93 | PREDICTED: acyl-CoA-binding domain-containing protein 4-like [Nicotiana sylvest | 886 | 012358 (8) | ref|XP_009759318.1| | 9e-107 | PREDICTED: tip elongation aberrant protein 3-like [Nicotiana sylvestris] |
| JMSF040H17 | Sequence | 647 | 001574 (8) | ref|XP_011090921.1| | 3e-43 | PREDICTED: acyl-CoA-binding domain-containing protein 4 [Sesamum indicum] ref|X | 859 | 012358 (8) | ref|XP_009759318.1| | 8e-101 | PREDICTED: tip elongation aberrant protein 3-like [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMSF038E04+ TTCCATGAGAGACCAGCA
____________________________________________________________
consensus TTCCATGAGAGACCAGCA
. : . : . : . : . : . :
JMSF038E04+ TTCTGTTTCAGTGTCAAATGCCCACACTGAAACTTTATCACTTGCAGGATCAGTTTTCCC
____________________________________________________________
consensus TTCTGTTTCAGTGTCAAATGCCCACACTGAAACTTTATCACTTGCAGGATCAGTTTTCCC
. : . : . : . : . : . :
JMSF038E04+ TCCAACCAGAAGCACTTTCTTCCCCCAAGAAACCAGAGAATGGCCCTTGCAAGCTGGGAT
____________________________________________________________
consensus TCCAACCAGAAGCACTTTCTTCCCCCAAGAAACCAGAGAATGGCCCTTGCAAGCTGGGAT
. : . : . : . : . : . :
JMSF038E04+ TTTTAAGGGGAGACTGGTTGGTGAAAGGTAAAGCTTTGATGATACTGAAGTCCAGGAAAA
____________________________________________________________
consensus TTTTAAGGGGAGACTGGTTGGTGAAAGGTAAAGCTTTGATGATACTGAAGTCCAGGAAAA
. : . : . : . : . : . :
JMSF038E04+ TCTATCAAAATTCAGCACCTGCACATCTTCTAATAGTCCACTCCCAGACTCACCTCCAAC
____________________________________________________________
consensus TCTATCAAAATTCAGCACCTGCACATCTTCTAATAGTCCACTCCCAGACTCACCTCCAAC
. : . : . : . : . : . :
JMSF011E13+ ATTGAAGCGAGGTATAGGTTTATC
JMSF038E04+ TACTACCATCTTGTTCCCAACAACAGCTGCAGAATGATTGAAGCGAGGTATAGGTTTATC
JMFS014E04+ ATTGAAGCGAGGTATAGGTTTATC
JMSF040H17+ ATTGAAGCGAGGTATAGGTTTATC
JMSF030K01+ ATTGAAGCGAGGTATAGGTTTATC
____________________________________________________________
consensus TACTACCATCTTGTTCCCAACAACAGCTGCAGAATGATTGAAGCGAGGTATAGGTTTATC
. : . : . : . : . : . :
JMSF011E13+ CCCAGCAATAGAAAGGACCATCCAATTTTCAGAGCTTCCTGAAGTACAATTGTTAAACTC
JMSF038E04+ CCCAGCAATAGAAAGGACCATCCAATTTTCAGAGCTTCCTGAAGTACAATTGTTAAACTC
JMFS014E04+ CCCAGCAATAGAAAGGACCATCCAATTTTCAGAGCTTCCTGAAGTACAATTGTTAAACTC
JMSF040H17+ CCCAGCAATAGAAAGGACCATCCAATTTTCAGAGCTTCCTGAAGTACAATTGTTAAACTC
JMSF030K01+ CCCAGCAATAGAAAGGACCATCCAATTTTCAGAGCTTCCTGAAGTACAATTGTTAAACTC
JMFF006E01+ TTTCAGAGCTTCCTGAAGTACAATTGTTAAACTC
____________________________________________________________
consensus CCCAGCAATAGAAAGGACCATCCAATTTTCAGAGCTTCCTGAAGTACAATTGTTAAACTC
. : . : . : . : . : . :
JMSF011E13+ TGATGCACCAGTAGAATGTTGGCAGCTGCTTTCTTCAGAATCGTTTATGCTATTGCCAAC
JMSF038E04+ TGATGCACCAGTAGAATGTTGGCAGCTGCTTTCTTCAGAATCGTTTATGCTATTGCCAAC
JMFS014E04+ TGATGCACCAGTAGAATGTTGGCAGCTGCTTTCTTCAGAATCGTTTATGCTATTGCCAAC
JMSF040H17+ TGATGCACCAGTAGAATGTTGGCAGCTGCTTTCTTCAGAATCGTTTATGCTATTGCCAAC
JMSF030K01+ TGATGCACCAGTAGAATGTTGGCAGCTGCTTTCTTCAGAATCGTTTATGCTATTGCCAAC
JMFF033E09+ ATGCACCAGTAGAATGTTGGCAGCTGCTTTCTTCAGAATCGTTTATGCTATTGCCAAC
JMSF016O01+ CCAGTAGAATGTTGGCAGCTGCTTTCTTCAGAATCGTTTATGCTATTGCCAAC
JMFF006E01+ TGATGCACCAGTAGAATGTTGGCAGCTGCTTTCTTCAGAATCGTTTATGCTATTGCCAAC
____________________________________________________________
consensus TGATGCACCAGTAGAATGTTGGCAGCTGCTTTCTTCAGAATCGTTTATGCTATTGCCAAC
. : . : . : . : . : . :
JMSF011E13+ AGCTTCACCAGTTGAACTGCTAAAACGTTTTGGGTGCCTGATTGGACTTTTAGTTCCCTG
JMSF038E04+ AGCTTCACCAGTTGAACTGCTAAAACGTTTTGGGTGCCTGATTGGACTTTTAGTTCCCTG
JMFS014E04+ AGCTTCACCAGTTGAACTGCTAAAACGTTTTGGGTGCCTGATTGGACTTTTAGTTCCCTG
JMSF040H17+ AGCTTCACCAGTTGAACTGCTAAAACGTTTTGGGTGCCTGATTGGACTTTTAGTTCCCTG
JMSF030K01+ AGCTTCACCAGTTGAACTGCTAAAACGTTTTGGGTGCCTGATTGGACTTTTAGTTCCCTG
JMFF033E09+ AGCTTCACCAGTTGAACTGCTAAAACGTTTTGGGTGCCTGATTGGACTTTTAGTTCCCTG
JMSF016O01+ AGCTTCACCAGTTGAACTGCTAAAACGTTTTGGGTGCCTGATTGGACTTTTAGTTCCCTG
JMFF006E01+ AGCTTCACCAGTTGAACTGCTAAAACGTTTTGGGTGCCTGATTGGACTTTTAGTTCCCTG
____________________________________________________________
consensus AGCTTCACCAGTTGAACTGCTAAAACGTTTTGGGTGCCTGATTGGACTTTTAGTTCCCTG
. : . : . : . : . : . :
JMSF011E13+ AGCAGTGTCTGAAAGTTGAACTTTTAATCTCCCAAGCTTCATGCGCCTTCTTGAAAAGCC
JMSF038E04+ AGCAGTGTCTGAAAGTTGAACTTTTAATCTCCCAAGCTTCATGCGCCTTCTTGAAAAGCC
JMFS014E04+ AGCAGTGTCTGAAAGTTGAACTTTTAATCTCCCAAGCTTCATGCGCCTTCTTGAAAAGCC
JMSF040H17+ AGCAGTGTCTGAAAGTTGAACTTTTAATCTCCCAAGCTTCATGCGCCTTCTTGAAAAGCC
JMSF030K01+ AGCAGTGTCTGAAAGTTGAACTTTTAATCTCCCAAGCTTCATGCGCCTTCTTGAAAAGCC
JMFF033E09+ AGCAGTGTCTGAAAGTTGAACTTTTAATCTCCCAAGCTTCATGCGCCTTCTTGAAAAGCC
JMSF016O01+ AGCAGTGTCTGAAAGTTGAACTTTTAATCTCCCAAGCTTCATGCGCCTTCTTGAAAAGCC
JMFF006E01+ AGCAGTGTCTGAAAGTTGAACTTTTAATCTCCCAAGCTTCATGCGCCTTCTTGAAAAGCC
____________________________________________________________
consensus AGCAGTGTCTGAAAGTTGAACTTTTAATCTCCCAAGCTTCATGCGCCTTCTTGAAAAGCC
. : . : . : . : . : . :
JMSF011E13+ AAACATGTTGTTAACCCCCATATTTCACACAGCTAATATACTCTCAAACCTGAAACCTCA
JMSF038E04+ AAACATGTTGTTAACCCCCATATTTCACACAGCTAATATACTCTCAAACCTGAAACCTCA
JMFS014E04+ AAACATGTTGTTAACCCCCATATTTCACACAGCTAATATACTCTCAAACCTGAAACCTCA
JMSF040H17+ AAACATGTTGTTAACCCCCATATTTCACACAGCTAATATACTCTCAAACCTGAAACCTCA
JMSF030K01+ AAACATGTTGTTAACCCCCATATTTCACACAGCTAATATACTCTCAAACCTGAAACCTCA
JMFF033E09+ AAACATGTTGTTAACCCCCATATTTCACACAGCTAATATACTCTCAAACCTGAAACCTCA
JMSF016O01+ AAACATGTTGTTAACCCCCATATTTCACACAGCTAATATACTCTCAAACCTGAAACCTCA
JMFF006E01+ AAACATGTTGTTAACCCCCATATTTCACACAGCTAATATACTCTCAAACCTGAAACCTCA
____________________________________________________________
consensus AAACATGTTGTTAACCCCCATATTTCACACAGCTAATATACTCTCAAACCTGAAACCTCA
. : . : . : . : . : . :
JMSF011E13+ AAAGAACAATACAGTTAGCCAGTTAGGGTTTCACAGAC
JMSF038E04+ AAAGAACAATACAGTTAGCCAGTTAGGGTTTCACAGACATTGAAGAAGAAGAAGACCT
JMFS014E04+ AAAGAACAATACAGTTAGCCAGTTAGGGTTTCACAGACATTGAAGAAGAAGAAGACCTAC
JMSF040H17+ AAAGAACAATACAGTTAGCCAGTTAGGGTTTCACAGACATTGAAGAAGAAGAAGACCTAC
JMSF030K01+ AAAGAACAATACAGTTAGCCAGTTAGGGTTTCACAGACATTGAAGAAGAAGAAGACCTAC
JMFF033E09+ AAAGAACAATACAGTTAGCCAGTTAGGGTTTCACAGACATTGAAGAAGAAGAAGACCTAC
JMSF016O01+ AAAGAACAATACAGTTAGCCAGTTAGGGTTTCACAGACATTGAAGAAGAAGAAGACCTAC
JMFF006E01+ AAAGAACAATACAGTTAGCCAGTTAGGGTTTCACAGACATTGAAGAAGAAGAAGACCTAC
____________________________________________________________
consensus AAAGAACAATACAGTTAGCCAGTTAGGGTTTCACAGACATTGAAGAAGAAGAAGACCTAC
. : . : . : . : . : . :
JMFS014E04+ TGCCGACTAGCCGAGAGCTTCAACC
JMSF040H17+ TGCCGACTAGCCGAGAGCTTCAACCATCCATA
JMSF030K01+ TGCCGACTAGCCGAGAGCTTCAACCATCCATATCGACAATGACACACGCAATAGACTCCA
JMFF033E09+ TGCCGACTAGCCGAGAGCTTCAACCATCCATATCGACAATGACACACGCAATAGACTCCA
JMSF016O01+ TGCCGACTAGCCGAGAGCTTCAACCATCCATATCGACAATGAC
JMFF006E01+ TGCCGACTAGCCGAGAGCTTCAACCATCCATATCGACAATGACACACGCAATAGACTCCA
____________________________________________________________
consensus TGCCGACTAGCCGAGAGCTTCAACCATCCATATCGACAATGACACACGCAATAGACTCCA
. : . : . : . : . : . :
JMSF030K01+ ACTTAGACTTTATTTTGGATTTTTTGTTGGCGCATATATACACACAGAATATTTGTATCT
JMFF033E09+ ACTTAGACTTTATTTTGGATTTTTTGTTGGCGCATATATACACACAGAATATTTGTATCT
JMFF006E01+ ACTTAGACTTTATTTTGGATTTTTTGTTGGCGCATATATACACACAGAATATTTGTATCT
____________________________________________________________
consensus ACTTAGACTTTATTTTGGATTTTTTGTTGGCGCATATATACACACAGAATATTTGTATCT
. : . : . : . : . : . :
JMSF030K01+ ATATGTACTCCTGCATATACAC
JMFF033E09+ ATATGTACTCCTGCATATACACGAGGGAAGGATAGATGTGACTCTCTGTAAGTATAGGT
JMFF006E01+ ATATGTACTCCTGCATATACACGAGGGAAGGATAGATGTGACTCTCTGTAAGTATAGGTG
____________________________________________________________
consensus ATATGTACTCCTGCATATACACGAGGGAAGGATAGATGTGACTCTCTGTAAGTATAGGTG
. : . : . : . : . : . :
JMFF006E01+ AGTTGTTGCGAGTGACTGAGCCGTGAAGGAGGGGCCGGGGGAGGGGGGTGTCAGAGTAAC
____________________________________________________________
consensus AGTTGTTGCGAGTGACTGAGCCGTGAAGGAGGGGCCGGGGGAGGGGGGTGTCAGAGTAAC