Contig 001573:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004M10Sequence576001573 (2)emb|CAE46658.1|4e-128putative alpha4-fucosyltransferase [Ipomoea nil]725012232 (2)emb|CAE46658.1|5e-138putative alpha4-fucosyltransferase [Ipomoea nil]
JMFF005P14Sequence522001573 (2)emb|CAE46658.1|2e-113putative alpha4-fucosyltransferase [Ipomoea nil]728012232 (2)emb|CAE46658.1|5e-138putative alpha4-fucosyltransferase [Ipomoea nil]

Alignment

This contig is upended


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JMFF004M10+                                   ACGAGCGTGTCATTTCTCTTATAGGAAGACAGATGA
                      ____________________________________________________________
consensus                                     ACGAGCGTGTCATTTCTCTTATAGGAAGACAGATGA
 
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JMFF004M10+           TAATTCCGATTCTTGTGAAAGATCGATCCAGCATAGGTCGATTGGACATCGTCTTTCGCA
JMFF005P14+                             AAGATCGATCCAGCATAGGTCGATTGGACATCGTCTTTCGCA
                      ____________________________________________________________
consensus             TAATTCCGATTCTTGTGAAAGATCGATCCAGCATAGGTCGATTGGACATCGTCTTTCGCA
 
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JMFF004M10+           TGATAGCTAATAAAGAGATCCTCATATCCTGATCTCGTCCTGCCGGCTTCAAGATCCATA
JMFF005P14+           TGATAGCTAATAAAGAGATCCTCATATCCTGATCTCGTCCTGCCGGCTTCAAGATCCATA
                      ____________________________________________________________
consensus             TGATAGCTAATAAAGAGATCCTCATATCCTGATCTCGTCCTGCCGGCTTCAAGATCCATA
 
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JMFF004M10+           TATACACGTAGTGGTTCACCTTTCCGTCTCTTAAGAGGAGGAGTACTAGTCTCAAACAAC
JMFF005P14+           TATACACGTAGTGGTTCACCTTTCCGTCTCTTAAGAGGAGGAGTACTAGTCTCAAACAAC
                      ____________________________________________________________
consensus             TATACACGTAGTGGTTCACCTTTCCGTCTCTTAAGAGGAGGAGTACTAGTCTCAAACAAC
 
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JMFF004M10+           AAAGCATCAGGCTTATCAGCCATAACTGGCAATTTAGTCCACAAACAGCTAAGCCCACAT
JMFF005P14+           AAAGCATCAGGCTTATCAGCCATAACTGGCAATTTAGTCCACAAACAGCTAAGCCCACAT
                      ____________________________________________________________
consensus             AAAGCATCAGGCTTATCAGCCATAACTGGCAATTTAGTCCACAAACAGCTAAGCCCACAT
 
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JMFF004M10+           CTACAAGAATACAAATTATCCATCCCATCAGGAATCCAAGTCCACCCTTTGACCAGAATA
JMFF005P14+           CTACAAGAATACAAATTATCCATCCCATCAGGAATCCAAGTCCACCCTTTGACCAGAATA
                      ____________________________________________________________
consensus             CTACAAGAATACAAATTATCCATCCCATCAGGAATCCAAGTCCACCCTTTGACCAGAATA
 
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JMFF004M10+           CTCACATGGTTCATTTTCAACTCCCCACATTCCAATTCACCCTCATCAACACCTTGCAGA
JMFF005P14+           CTCACATGGTTCATTTTCAACTCCCCACATTCCAATTCACCCTCATCAACACCTTGCAGA
                      ____________________________________________________________
consensus             CTCACATGGTTCATTTTCAACTCCCCACATTCCAATTCACCCTCATCAACACCTTGCAGA
 
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JMFF004M10+           GAAGCATAAGAAGAAATCAAACCCGACCCATTTCCGAACCCCCCTCCGTGCTTCTCTCTG
JMFF005P14+           GAAGCATAAGAAGAAATCAAACCCGACCCATTTCCGAACCCCCCTCCGTGCTTCTCTCTG
                      ____________________________________________________________
consensus             GAAGCATAAGAAGAAATCAAACCCGACCCATTTCCGAACCCCCCTCCGTGCTTCTCTCTG
 
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JMFF004M10+           AACTGGGCACAACCCACTTTAGAATCCCACTTCTTGAAAGCCCCCAAGAGGTTCTGGAAC
JMFF005P14+           AACTGGGCACAACCCACTTTAGAATCCCACTTCTTGAAAGCCCCCAAGAGGTTCTGGAAC
                      ____________________________________________________________
consensus             AACTGGGCACAACCCACTTTAGAATCCCACTTCTTGAAAGCCCCCAAGAGGTTCTGGAAC
 
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JMFF004M10+           GGATCGGGCTTGGAATCTGACAAGGACGCAAGAAAGATTGAGTCTTTGGGTGAGGGGATT
JMFF005P14+           GGATCGGGCTTGGAATCTGACAAGGACGCAAGAAAGATTGAGTCTTTGGGTGAGGGGATT
                      ____________________________________________________________
consensus             GGATCGGGCTTGGAATCTGACAAGGACGCAAGAAAGATTGAGTCTTTGGGTGAGGGGATT