Contig 001571:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005L16Sequence477001571 (3)gb|KJB13108.1|3e-53hypothetical protein B456_002G079100 [Gossypium raimondii]745001571 (3)ref|XP_006593333.1|1e-104PREDICTED: uncharacterized protein LOC100305601 isoform X1 [Glycine max]
JMSF050J14Sequence644001571 (3)ref|XP_002534445.1|3e-109Minor allergen Alt a, putative [Ricinus communis] gb|EEF27937.1| Minor allergen 185009869 (20)ref|XP_009613609.1|5e-06PREDICTED: subtilisin-like protease [Nicotiana tomentosiformis] gb|ABQ58079.1| s

Alignment

This contig is upended


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rJMFF005L16- ATTATATTCTGGTATTGCATTATGAAAAAAA
                      ____________________________________________________________
consensus ATTATATTCTGGTATTGCATTATGAAAAAAA
 
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rJMFF005L16- ACCAACAACAACAAAGGAAAACAGAAGTATTCTGTAATAATATGGCAAAGGCACTACACT
                      ____________________________________________________________
consensus ACCAACAACAACAAAGGAAAACAGAAGTATTCTGTAATAATATGGCAAAGGCACTACACT
 
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rJMFF005L16- AGTTTATTTCAAATGAAGATGTCTATGAAAGAAAGGGGTATGCATGACTCCAATTTCTGA
                      ____________________________________________________________
consensus AGTTTATTTCAAATGAAGATGTCTATGAAAGAAAGGGGTATGCATGACTCCAATTTCTGA
 
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rJMFF005L16- ACAGTGCAAAGTGTATATAGAATTGAAGGAGATTAATCAGGCAGATCCAGATTTAAGCTT
                      ____________________________________________________________
consensus ACAGTGCAAAGTGTATATAGAATTGAAGGAGATTAATCAGGCAGATCCAGATTTAAGCTT
 
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rJMFF005L16- CTTTGTAATGGCGGCAATGTATTTCCCCTGGTGGAACGCTTGTTCCAGCTCGAGCTGGGA
JMSF050J14+ TGGTGGAACGCTTGTTCCAGCTCGAGCTGGGA
                      ____________________________________________________________
consensus CTTTGTAATGGCGGCAATGTATTTCCCCTGGTGGAACGCTTGTTCCAGCTCGAGCTGGGA
 
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rJMFF005L16- TGGTTGTCGGGACCCATCTCCAGCGTATGTTCCAGCGCCATAAGGGCTTCCTCCCTTAAC
JMSF050J14+ TGGTTGTCGGGACCCATCTCCAGCGTATGTTCCAGCGCCATAAGGGCTTCCTCCCTTAAC
                      ____________________________________________________________
consensus TGGTTGTCGGGACCCATCTCCAGCGTATGTTCCAGCGCCATAAGGGCTTCCTCCCTTAAC
 
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rJMFF005L16- CTTCTCCATTTCAAACATGCCAGCTCCAAAGGAGTAGCCGATGGGCACAAAGATCATCCC
JMSF050J14+ CTTCTCCATTTCAAACATGCCAGCTCCAAAGGAGTAGCCGATGGGCACAAAGATCATCCC
                      ____________________________________________________________
consensus CTTCTCCATTTCAAACATGCCAGCTCCAAAGGAGTAGCCGATGGGCACAAAGATCATCCC
 
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rJMFF005L16- GTGGTGGACCAGCTGAGTGATTGCTGTCAACGCGGTTGTCTCTTGGCCGCCTCCCTGGGA
JMSF050J14+ GTGGTGGACCAGCTGAGTGATTGCTGTCAACGCGGTTGTCTCTTGGCCGCCTCCCTGGGA
                      ____________________________________________________________
consensus GTGGTGGACCAGCTGAGTGATTGCTGTCAACGCGGTTGTCTCTTGGCCGCCTCCCTGGGA
 
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rJMFF005L16- TCCAGTGCTGTAGAACAGGCCTGCGGGCTTGCCTGCTAGTGCCTGGGTTCTCCATAGCCC
JMSF050J14+ TCCAGTGCTGTAGAACAGGCCTGCGGGCTTGCCTGCTAGTGCCTGGGTTCTCCATAGCCC
                      ____________________________________________________________
consensus TCCAGTGCTGTAGAACAGGCCTGCGGGCTTGCCTGCTAGTGCCTGGGTTCTCCATAGCCC
 
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rJMFF005L16- TCCGGTCGCATCGAGAAATGCTTTGAACTGAGCAGACATCATCCCAAACCGAGTTGGGAA
JMSF050J14+ TCCGGTCGCATCGAGAAATGCTTTGAACTGAGCAGACATCATCCCAAACCGAGTTGGGAA
JMFF005L16+ GGTCGCATCGAGAAATGCTTTGAACTGAGCAGACATCATCCCAAACCGAGTTGGGAA
                      ____________________________________________________________
consensus TCCGGTCGCATCGAGAAATGCTTTGAACTGAGCAGACATCATCCCAAACCGAGTTGGGAA
 
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rJMFF005L16- CCCGAATACGAACCCATCAGCTTCAGTAAGGTCATTGGGGGATATGATTGGCACATCGCT
JMSF050J14+ CCCGAATACGAACCCATCAGCTTCAGTAAGGTCATTGGGGGATATGATTGGCACATCGCT
JMFF005L16+ CCCGAATACGAACCCATCAGCTTCAGTAAGGTCATTGGGGGATATGATTGGCACATCGCT
                      ____________________________________________________________
consensus CCCGAATACGAACCCATCAGCTTCAGTAAGGTCATTGGGGGATATGATTGGCACATCGCT
 
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rJMFF005L16- CTTCGGTGGTGCACTCAGCTTTCCAAGAATCTCATCANAAAGCGTTTCTGGAACCTGAAA
JMSF050J14+ CTTCGGTGGTGCACTCAGCTTTCCAAGAATCTCATCAGAAAGCGTTTCTGGAACCTGAAA
JMFF005L16+ CTTCGGTGGTGCACTCAGCTTTCCAAGAATCTCATCAGAAAGCGTTTCTGGAACCTGAAA
                      ____________________________________________________________
consensus CTTCGGTGGTGCACTCAGCTTTCCAAGAATCTCATCAGAAAGCGTTTCTGGAACCTGAAA
 
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rJMFF005L16- TAGCTTGGCCTCAACTCCTTCAACAGAGTCAGCTCCTTTCTTGATTTCATGTGC
JMSF050J14+ TAGCTTGGCCTCAACTCCTTCAACAGAGTCAGCTCCTTTCTTGATTTCATGTGCCAGCTT
JMFF005L16+ TAGCTTGGCCTCAACTCCTTCAACAGAGTCAGCTCCTTTCTTGATTTCATGTGCCAGCTT
                      ____________________________________________________________
consensus TAGCTTGGCCTCAACTCCTTCAACAGAGTCAGCTCCTTTCTTGATTTCATGTGCCAGCTT
 
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JMSF050J14+ CTCAACATGTCCATAAGTGGAGTAGAAAACAATGTAAAGCTTGGTTGCCATTGGAGGATC
JMFF005L16+ CTCAACATGTCCATAAGTGGAGTAGAAAACAATGTAAAGCTTGGTTGCCATTGGAGGATC
                      ____________________________________________________________
consensus CTCAACATGTCCATAAGTGGAGTAGAAAACAATGTAAAGCTTGGTTGCCATTGGAGGATC
 
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JMSF050J14+ TTGGATTGTTTTGTGAGTGAAGAAAGGTGGTAGGTGAATGAATGAAACGTTGAAACAGAA
JMFF005L16+ TTGGATTGTTTTGTGAGTGAAGAAAGGTGGTAGGTGAATGAATGAAACGTTGAAACAGAA
                      ____________________________________________________________
consensus TTGGATTGTTTTGTGAGTGAAGAAAGGTGGTAGGTGAATGAATGAAACGTTGAAACAGAA
 
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JMSF050J14+ GAGAGAGAGAT
JMFF005L16+ GAGAGAGAGATGGAGAGAGTGGGAAGAGGTGTCTCTGGTTATATAGTGGTGGAATCTGGA
                      ____________________________________________________________
consensus GAGAGAGAGATGGAGAGAGTGGGAAGAGGTGTCTCTGGTTATATAGTGGTGGAATCTGGA
 
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JMFF005L16+ ATGAGTTGACCATCCGATCCCTTTTCTTTATCTCTGGAACTTTGGCAATTTGAAATTATT
                      ____________________________________________________________
consensus ATGAGTTGACCATCCGATCCCTTTTCTTTATCTCTGGAACTTTGGCAATTTGAAATTATT