Contig 001559:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF050J04+                                      GCGCGAGTTGAGCTTTGGTTATTTCGATCTTAT
                      ____________________________________________________________
consensus                                        GCGCGAGTTGAGCTTTGGTTATTTCGATCTTAT
 
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JMSF050J04+           TTTTATTTGGCAGTCCAGGCACTTCAAAGTACTGGGATTCAGACTCTAAGCTTTCAAAAC
                      ____________________________________________________________
consensus             TTTTATTTGGCAGTCCAGGCACTTCAAAGTACTGGGATTCAGACTCTAAGCTTTCAAAAC
 
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JMSF050J04+           CATCCCAGTTCCATATATTGTGCATACAAAGCAGAGAGAAAGAACACATCCCATGAAAAA
JMFF003L20+              CCCAGTTCCATATATTGTGCATACAAAGCAGAGAGAAAGAACACATCCCATGAAAAA
                      ____________________________________________________________
consensus             CATCCCAGTTCCATATATTGTGCATACAAAGCAGAGAGAAAGAACACATCCCATGAAAAA
 
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JMSF050J04+           CAATTTTCGGGATGTTAAGGTTCCTGGCGATATTGGTCGTCCATGGGAGGCACATATCGG
JMFF003L20+           CAATTTTCGGGATGTTAAGGTTCCTGGCGATATTGGTCGTCCATGGGAGGCACATATCGG
                      ____________________________________________________________
consensus             CAATTTTCGGGATGTTAAGGTTCCTGGCGATATTGGTCGTCCATGGGAGGCACATATCGG
 
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JMSF050J04+           AGATTATGCAGGTGGGGGTGGGTTTCATCTCCCTCATCACTTCCTCGATTCTGGGTTGAA
JMFF003L20+           AGATTATGCAGGTGGGGGTGGGTTTCATCTCCCTCATCACTTCCTCGATTCTGGGTTGAA
                      ____________________________________________________________
consensus             AGATTATGCAGGTGGGGGTGGGTTTCATCTCCCTCATCACTTCCTCGATTCTGGGTTGAA
 
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JMSF050J04+           GCAACTTCGTGGCGGCGTAGAAGTTCATCCCCATATCAAAAGATGGGAGCAAGTCCACAT
JMFF003L20+           GCAACTTCGTGGCGGCGTAGAAGTTCATCCCCATATCAAAAGATGGGAGCAAGTCCACAT
                      ____________________________________________________________
consensus             GCAACTTCGTGGCGGCGTAGAAGTTCATCCCCATATCAAAAGATGGGAGCAAGTCCACAT
 
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JMSF050J04+           TCTCGCAGCCCTCTGGCAAGCCAACCTCGGCGCAGGGAAAATAACCAAGCTGGACGACTT
JMFF003L20+           TCTCGCAGCCCTCTGGCAAGCCAACCTCGGCGCAGGGAAAATAACCAAGCTGGACGACTT
                      ____________________________________________________________
consensus             TCTCGCAGCCCTCTGGCAAGCCAACCTCGGCGCAGGGAAAATAACCAAGCTGGACGACTT
 
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JMSF050J04+           GGATTGGGAGACCAGATTGTTGGGCGCGATCAATCACGGCTTTGACTCGGGTGGCGTTAT
JMFF003L20+           GGATTGGGAGACCAGATTGTTGGGCGCGATCAATCACGGCTTTGACTCGGGTGGCGTTAT
                      ____________________________________________________________
consensus             GGATTGGGAGACCAGATTGTTGGGCGCGATCAATCACGGCTTTGACTCGGGTGGCGTTAT
 
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JMSF050J04+           GGGGAGTTAGGAAAAGTGTTATTCTGACGCCCCTATGGGCCAGCAATCTGGCTATGTCTA
JMFF003L20+           GGGGAGTTAGGAAAAGTGTTATTCTGACGCCCCTATGGGCCAGCAATCTGGCTATGTCTA
                      ____________________________________________________________
consensus             GGGGAGTTAGGAAAAGTGTTATTCTGACGCCCCTATGGGCCAGCAATCTGGCTATGTCTA
 
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JMSF050J04+           TCATGGGGATCATGTGGCCTTGAGCCATGAATGGGACCAACACGAAATGCTGCTGCTCTG
JMFF003L20+           TCATGGGGATCATGTGGCCTTGAGCCATGAATGGGACCAACACGAAATGCTGCTGCTCTG
                      ____________________________________________________________
consensus             TCATGGGGATCATGTGGCCTTGAGCCATGAATGGGACCAACACGAAATGCTGCTGCTCTG
 
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JMSF050J04+           TTATCAACGCCATCGATCGCTACCAACTGGAAAATGGAAACTGGCTTTCGGGATTTACTG
JMFF003L20+           TTATCAACGCCATCGATCGCTACCAACTGGAAAATGGAAACTGGCTTTCGGGATTTACTG
                      ____________________________________________________________
consensus             TTATCAACGCCATCGATCGCTACCAACTGGAAAATGGAAACTGGCTTTCGGGATTTACTG
 
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JMSF050J04+           GCTTTGCTTAGCTTAGTGTGTTTTGATATGCATGACAAGTGGGGACTGAATTC       
JMFF003L20+           GCTTTGCTTAGCTTAGTGTGTTTTGATATGCATGACAAGTGGGGACTGAATTCAAGTTCT
                      ____________________________________________________________
consensus             GCTTTGCTTAGCTTAGTGTGTTTTGATATGCATGACAAGTGGGGACTGAATTCAAGTTCT