Contig 001551:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002I20Sequence411001551 (12)ref|XP_009771504.1|3e-24PREDICTED: probable serine/threonine-protein kinase At4g35230 isoform X2 [Nicot
JMFF003K05Sequence531001551 (12)ref|XP_009771504.1|3e-68PREDICTED: probable serine/threonine-protein kinase At4g35230 isoform X2 [Nicot251006854 (10)
JMFF003O16Sequence491001551 (12)ref|XP_009771504.1|1e-48PREDICTED: probable serine/threonine-protein kinase At4g35230 isoform X2 [Nicot358006854 (10)
JMFF006J01Sequence471001551 (12)ref|XP_009771502.1|1e-51PREDICTED: probable serine/threonine-protein kinase At4g35230 isoform X1 [Nicot251006854 (10)
JMFF022A20Sequence407001551 (12)ref|XP_009618839.1|2e-40PREDICTED: probable serine/threonine-protein kinase At4g35230 [Nicotiana toment659006854 (10)ref|XP_009767983.1|4e-64PREDICTED: probable serine/threonine-protein kinase At4g35230 [Nicotiana sylves
JMFF024B16Sequence422001551 (12)ref|XP_009618839.1|3e-41PREDICTED: probable serine/threonine-protein kinase At4g35230 [Nicotiana toment250006854 (10)
JMFF030P05Sequence506001551 (12)ref|XP_009771502.1|2e-62PREDICTED: probable serine/threonine-protein kinase At4g35230 isoform X1 [Nicot254006854 (10)
JMFF034G03Sequence596001551 (12)ref|XP_009618839.1|4e-86PREDICTED: probable serine/threonine-protein kinase At4g35230 [Nicotiana toment
JMFF042E09Sequence662001551 (12)ref|XP_009618839.1|1e-86PREDICTED: probable serine/threonine-protein kinase At4g35230 [Nicotiana toment496006854 (10)ref|XP_009767983.1|7e-34PREDICTED: probable serine/threonine-protein kinase At4g35230 [Nicotiana sylves
JMFS027F07Sequence430001551 (12)ref|XP_009618839.1|9e-35PREDICTED: probable serine/threonine-protein kinase At4g35230 [Nicotiana toment
JMSF050E19Sequence692001551 (12)ref|XP_009618839.1|3e-101PREDICTED: probable serine/threonine-protein kinase At4g35230 [Nicotiana toment690006854 (10)ref|XP_009767983.1|2e-93PREDICTED: probable serine/threonine-protein kinase At4g35230 [Nicotiana sylves
JMSF051F05Sequence687001551 (12)ref|XP_009618839.1|2e-102PREDICTED: probable serine/threonine-protein kinase At4g35230 [Nicotiana toment690006854 (10)ref|XP_009767983.1|1e-95PREDICTED: probable serine/threonine-protein kinase At4g35230 [Nicotiana sylves

Alignment

This contig is upended


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JMSF050E19+                                                                CACCNTC
JMSF051F05+                                                                     TC
                      ____________________________________________________________
consensus                                                                  CACCNTC
 
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JMSF050E19+           ATCAAAAAGAACCCTGTAAGCATTCAAGTCATGGTACAATGGTCGGCCTTCACAGCTACA
JMSF051F05+           ATCAAAAAGAACCCTGTAAGCATTCAAGTCATGGTACAATGGTCGGCCTTCACAGCTACA
JMFF034G03+                                                                      A
JMFF042E09+                                                                      A
                      ____________________________________________________________
consensus             ATCAAAAAGAACCCTGTAAGCATTCAAGTCATGGTACAATGGTCGGCCTTCACAGCTACA
 
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JMSF050E19+           ATAATCCAATGCTTCAGCAATGTATAGAGCTACTNTGAGACGCATAGCCCACTCAAGGGT
JMSF051F05+           ATAATCCAATGCTTCAGCAATGTATAGAGCTACTCTGAGACGCATAGCCCACTCAAGGGT
JMFF034G03+           ATAATCCAATGCTTCAGCAATGTATAGAGCTACTNTGAGACGCATAGCCCACTCAAGGGT
JMFF042E09+           ATAATCCAATGCTTCAGCAATGTATAGAGCTACTCTGAGACGCATAGCCCACTCAAGGGT
                      ____________________________________________________________
consensus             ATAATCCAATGCTTCAGCAATGTATAGAGCTACTCTGAGACGCATAGCCCACTCAAGGGT
 
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JMSF050E19+           TTGGTTTTCCCAGTGAAATAGGTGTTTAGCAAGCGTATCATTAGGCATAAACTCAGCAAC
JMSF051F05+           TTGGTTTTCCCAGTGAAATAGGTGTTTAGCAAGCGTATCATTAGGCATAAACTCAGCAAC
JMFF034G03+           TTGGTTTTCCCAGTGAAATAGGTGTTTAGCAAGCGTATCATTAGGCATAAACTCAGCAAC
JMFF003K05+                   CCCAGTGAAATAGGTGTTTAGCAAGCGTATCATTAGGCATAAACTCAGCAAC
JMFF030P05+                                            CGTATCATTAGGCATAAACTCAGCAAC
JMFF042E09+           TTGGTTTTCCCAGTGAAATAGGTGTTTAGCAAGCGTATCATTAGGCATAAACTCAGCAAC
                      ____________________________________________________________
consensus             TTGGTTTTCCCAGTGAAATAGGTGTTTAGCAAGCGTATCATTAGGCATAAACTCAGCAAC
 
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JMSF050E19+           AAGCAACCTCTCATCACCATCGCAGCAGTACCCAATCAAATTAGCAAGCCTTTTGTGCCT
JMSF051F05+           AAGCAACCTCTCATCACCATCGCAGCAGTACCCAATCAAATTAGCAAGCCTTTTGTGCCT
JMFF034G03+           AAGCAACCTCTCATCACCATCGCAGCAGTACCCAATCAAATTAGCAAGCCTTTTGTGCCT
JMFF003K05+           AAGCAACCTCTCATCACCATCGCAGCAGTACCCAATCAAATTAGCAAGCCTTTTGTGCCT
JMFF030P05+           AAGCAACCTCTCATCACCATCGCAGCAGTACCCAATCAAATTAGCAAGCCTTTTGTGCCT
JMFF003O16+                                GCAGCAGTACCCAATCAAATTAGCAAGCCTTTTGTGCCT
JMFF006J01+                     TCATCACCATNGCAGCAGTACCCAATCAAATTAGCAAGCCTTTTGTGCCT
JMFF024B16+                                                                    CCT
JMFF042E09+           AAGCAACCTCTCATCACCATCGCAGCAGTACCCAATCAAATTAGCAAGCCTTTTGTGCCT
                      ____________________________________________________________
consensus             AAGCAACCTCTCATCACCATCGCAGCAGTACCCAATCAAATTAGCAAGCCTTTTGTGCCT
 
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JMSF050E19+           GAACTTCCCAACACCCTTAGCTTCGTCCGCGAATTGCTTAGGATCAGGCCACGCCGTCTT
JMSF051F05+           GAACTTCCCAACACCCTTAGCTTCGTCCGCGAATTGCTTAGGATCAGGCCACGCCGTCTT
JMFF034G03+           GAACTTCCCAACACCCTTAGCTTCGTCCGCGAATTGCTTAGGATCAGGCCACGCCGTCTT
JMFF003K05+           GAACTTCCCAACACCCTTAGCTTCGTCCGCGAATTGCTTAGNATCAGGCCACGCCGTCTT
JMFF030P05+           GAACTTCCCAACACCCTTAGCTTCGTCCGCGAATTGCTTAGGATCAGGCCACGCCGTCTT
JMFF003O16+           GAACTTCCCAACACCCTTAGCTTCGTCCGCGAATTGCTTAGGATCAGGCCACGCCGTCTT
JMFF006J01+           GAACTTCCCAACACCCTTAGCTTCGTCCGCGAATTGCTTAGGATCAGGCCACGCCGTCTT
JMFF024B16+           GAACTTCCCAACACCCTTAGCTTCGTCCGCGAATTGCTTAGGATCAGGCCACGCCGTCTT
JMFS027F07+                                            TTGCTTAGGATCAGGCCACGCCGTCTT
JMFF022A20+             ACTTCCCAACACCCTTAGCTTCGTCCGCGAATTGCTTAGGATCAGGCCACGCCGTCTT
JMFF042E09+           GAACTTCCCAACACCCTTAGCTTCGTCCGCGAATTGCTTAGGATCAGGCCACGCCGTCTT
                      ____________________________________________________________
consensus             GAACTTCCCAACACCCTTAGCTTCGTCCGCGAATTGCTTAGGATCAGGCCACGCCGTCTT
 
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JMSF050E19+           GGTAAACTTCTTCACAGCTATCCAGCGGCGATTCTGCAGGCGGCCCTTGTACACCACATT
JMSF051F05+           GGTAAACTTCTTCACAGCTATCCAGCGGCGATTCTGCAGGCGGCCCTTGTACACCACATT
JMFF034G03+           GGTAAACTTCTTCACAGCTATCCAGCGGCGATTCTGCAGGCGGCCCTTGTACACCACATT
JMFF003K05+           GGTAAACTTCTTCACAGCTATCCAGCGGCGATTCTGCAGGCGGCCCTTGTACACCACATT
JMFF030P05+           GGTAAACTTCTTCACAGCTATCCAGCGGCGATTCTGCAGGCGGCCCTTGTACACCACATT
JMFF003O16+           GGTAAACTTCTTCACAGCTATCCAGCGGCGATTCAGCAGGCGGCCCTTGTACACCACATT
JMFF006J01+           GGTAAACTTCTTCACAGCTATCCAGCGGCGATTCTGCAGGCGGCCCTTGTACACCACATT
JMFF024B16+           GGTAAACTTCTTCACAGCTATCCAGCGGCGATTCTGCAGGCGGCCCTTGTACACCACATT
JMFS027F07+           GGTAAACTTCTTCACAGCTATCCAGCGGCGATTCTGCAGGCGGCCCTTGTACACCACATT
JMFF022A20+           GGTAAACTTCTTCACAGCTATCCAGCGGCGATTCTGCAGGCGGCCCTTGTACACCACATT
JMFF042E09+           GGTAAACTTCTTCACAGCTATCCAGCGGCGATTCTGCAGGCGGCCCTTGTACACCACATT
JMFF002I20+                  TTCTTCACAGCTATCCAGCGGCGATTCTGCAGGCGGCCCTTGTACACCACATT
                      ____________________________________________________________
consensus             GGTAAACTTCTTCACAGCTATCCAGCGGCGATTCTGCAGGCGGCCCTTGTACACCACATT
 
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JMSF050E19+           CGGAGCCTTCTCCCCGCTCTCGGACACAATGAACTCGGAGCTGAAATTGTTAGTAGCCGC
JMSF051F05+           CGGAGCCTTCTCCCCGCTCTCGGACACAATGAACTCGGAGCTGAAATTGTTAGTAGCCGC
JMFF034G03+           CGGAGCCTTCTCCCCGCTCTCGGACACAATGAACTCGGAGCTGAAATTGTTAGTAGCCGC
JMFF003K05+           CGGAGCCTTCTCCCCGCTCTCGGACACAATGAACTCGGAGCTGAAATTGTTAGTAGCCGC
JMFF030P05+           CGGAGCCTTCTCCCCGCTCTCGGACACAATGAACTCGGAGCTGAAATTGTTAGTAGCCGC
JMFF003O16+           CGGAGCCTTCTCCCCGCTCTCGGACACAATGAACTCGGAGCTGAAATTGTTAGTAGCCGC
JMFF006J01+           CGGAGCCTTCTCCCCGCTCTCGGACACAATGAACTCGGAGCTGAAATTGTTAGTAGCCGC
JMFF024B16+           CGGAGCCTTCTCCCCGCTCTCGGACACAATGAACTCGGAGCTGAAATTGTTAGTAGCCGC
JMFS027F07+           CGGAGCCTTCTCCCCGCTCTCGGACACAATGAACTCGGAGCTGAAATTGTTAGTAGCCGC
JMFF022A20+           CGGAGCCTTCTCCCCGCTCTCGGACACAATGAACTCGGAGCTGAAATTGTTAGTAGCCGC
JMFF042E09+           CGGAGCCTTCTCCCCGCTCTCGGACACAATGAACTCGGAGCTGAAATTGTTAGTAGCCGC
JMFF002I20+           CGGAGCCTTCTCCCCGCTCTCGGACACAATGAACTCGGAGCTGAAATTGTTAGTAGCCGC
                      ____________________________________________________________
consensus             CGGAGCCTTCTCCCCGCTCTCGGACACAATGAACTCGGAGCTGAAATTGTTAGTAGCCGC
 
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JMSF050E19+           CTTGAGCTCCGACAGCGAGAACTCCGCGAACACGCTAGCTCCCCCCTCCGAGGCGGCGCC
JMSF051F05+           CTTGAGCTCCGACAGCGAGAACTCCGCGAACACGCTAGCTCCCCCCTCCGAGGCGGCGCC
JMFF034G03+           CTTGAGCTCCGACAGCGAGAACTCCGCGAACACGCTAGCTCCCCCCTCCGAGGCGGCGCC
JMFF003K05+           CTTGAGCTCCGACAGCGAGAACTCCGCGAACACGCTAGCTCCCCCCTCCGAGGCGGCGCC
JMFF030P05+           CTTGAGCTCCGACAGCGAGAACTCCGCGAACACGCTAGCTCCCCCCTCCGAGGCGGCGCC
JMFF003O16+           CTTGAGCTCCGACAGCGAGAACTCCGCGAACACGCTAGCTCCCCCCTCCGAGGCGGCGCC
JMFF006J01+           CTTGAGCTCCGACAGCGAGAACTCCGCGAACACGCTAGCTCCCCCCTCCGAGGCGGCGCC
JMFF024B16+           CTTGAGCTCCGACAGCGAGAACTCCGCGAACACGCTAGCTCCCCCCTCCGAGGCGGCGCC
JMFS027F07+           CTTGAGCTCCGACAGCGAGAACTCCGCGAACACGCTAGCTCCCCCCTCCGAGGCGGCGCC
JMFF022A20+           CTTGAGCTCCGACAGCGAGAACTCCGCGAACACGCTAGCTCCCCCCTCCGAGGCGGCGCC
JMFF042E09+           CTTGAGCTCCGACAGCGAGAACTCCGCGAACACGCTAGCTCCCCCCTCCGAGGCGGCGCC
JMFF002I20+           CTTGAGCTCCGACAGCGAGAACTCCGCGAACACGCTAGCTCCCCCCTCCGAGGCGGCGCC
                      ____________________________________________________________
consensus             CTTGAGCTCCGACAGCGAGAACTCCGCGAACACGCTAGCTCCCCCCTCCGAGGCGGCGCC
 
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JMSF050E19+           GCCTCCTCCTCCTCCCCCGCTGTCTTTCCCATTTGAGGAGAGGAGCGTGTGGCCCTGCCC
JMSF051F05+           GCCTCCTCCTCCTCCCCCGCTGTCTTTCCCATTTGAGGAGAGGAGCGTGTGGCCCTGCCC
JMFF034G03+           GCCTCCTCCTCCTCCCCCGCTGTCTTTCCCATTTGAGGAGAGGAGCGTGTGGCCCTGCCC
JMFF003K05+           GCCTCCTCCTCCTCCCCCGCTGTCTTTCCCATTTGAGGAGAGGAGCGTGTGGCCCTGCCC
JMFF030P05+           GCCTCCTCCTCCTCCCCCGCTGTCTTTCCCATTTGAGGAGAGGAGCGTGTGGCCCTGCCC
JMFF003O16+           GCCTCCTCCTCCTCCCCCGCTGTCTTTCCCATTTGAGGAGAGGAGCGTGTGGCCCTGCCC
JMFF006J01+           GCCTCCTCCTCCTCCCCCGCTGTCTTTCCCATTTGAGGAGAGGAGCGTGTGGCCCTGCCC
JMFF024B16+           GCCTCCTCCTCCTCCCCCGCTGTCTTTCCCATTTGAGGAGAGGAGCGTGTGGCCCTGCCC
JMFS027F07+           GCCTCCTCCTCCTCCCCCGCTGTCTTTCCCATTTGAGGAGAGGAGCGTGTGGACCTGCCC
JMFF022A20+           GCCTCCTCCTCCTCCCCCGCTGTCTTTCCCATTTGAGGAGAGGAGCGTGTGGCCCTGCCC
JMFF042E09+           GCCTCCTCCTCCTCCCCCGCTGTCTTTCCCATTTGAGGAGAGGAGCGTGTGGCCCTGCCC
JMFF002I20+           GCCTCCTCCTCCTCCCCCGCTGTCTTTCCCATTTGAGGAGAGGAGCGTGTGGCCCTGCCC
                      ____________________________________________________________
consensus             GCCTCCTCCTCCTCCCCCGCTGTCTTTCCCATTTGAGGAGAGGAGCGTGTGGCCCTGCCC
 
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JMSF050E19+           TTGCCGGTGATCCTTCTCCGAGATAGGGCGGTCCTTGGAGAACGTCGATTGCCAACAGCC
JMSF051F05+           TTGCCGGTGATCCTTCTCCGAGATAGGGCGGTCCTTGGAGAACGTCGATTGCCAACAGCC
JMFF034G03+           TTGCCGGTGATCCTTCTCCGAGATAGGGCGGTCCTTGGAGAACGTCGATTGCCAACAGCC
JMFF003K05+           TTGCCGGTGATCCTTCTCCGAGATAGGGCGGTCCTTGGAGAACGTCGATTGCCAACAGCC
JMFF030P05+           TTGCCGGTGATCCTTCTCCGAGATAGGGCGGTCCTTGGAGAACGTCGATTGCCAACAGCC
JMFF003O16+           TTGCCGGTGATCCTTCTCCGAGATAGGGCGGTCCTTGGAGAACGTCGATTGCCAACAGCC
JMFF006J01+           TTGCCGGTGATCCTTCTCCGAGATAGGGCGGTCCTTGGAGAACGTCGATTGCCAACAGCC
JMFF024B16+           TTGCCGGTGATCCTTCTCCGAGATAGGGCGGTCCTTGGAGAACGTCGATTGCCAACAGCC
JMFS027F07+           TTGCCGGTGATCCTTCTCCGAGATAGGGCGGTCCTTGGAGAACGTCGATTGCCAACAGCC
JMFF022A20+           TTGCCGGTGATCCTTCTCCGAGATAGGGCGGTCCTTGGAGAACGTCGATTGCCAACAGCC
JMFF042E09+           TTGCCGGTGATCCTTCTCCGAGATAGGGCGGTCCTTGGAGAACGTCGATTGCCAACAGCC
JMFF002I20+           TTGCCGGTGATCCTTCTCCGAGATAGGGCGGTCCTTGGAGAACGTCGATTGCCAACAGCC
                      ____________________________________________________________
consensus             TTGCCGGTGATCCTTCTCCGAGATAGGGCGGTCCTTGGAGAACGTCGATTGCCAACAGCC
 
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JMSF050E19+           CATAACTCGGTCGAGTTGAGTTGACTCACCCTAAACTCAAACCTTCCGCACGCACAACTG
JMSF051F05+           CATAACTCGGTCGAGTTGAGTTGACTCACCCTAAACTCAAACCTTCCGCACGCACAACTG
JMFF034G03+           CATAACTCGGTCGAGTTGAGTTGACTCACCCTAAACTCAAACCTTCCGCAC         
JMFF003K05+           CATAACTCGGTCGAGTTGAGTTGACTCACCCTAAACTCAAACCTTCCGCACGCACAACT 
JMFF030P05+           CATAACTCGGTCGAGTTGAGTTGACTCACCCTAAACTCAAACCTTCCGCACGCACAACT 
JMFF003O16+           CATAACTCGGTCGAGTTGAGTTGACTCACCCTAAACTCAAACCTTCCGCACGCACAACTG
JMFF006J01+           CATAACTCGGTCGAGTTGAGTTGACTCACCCTAAACTCAAACCTTCCGCACGCACAACT 
JMFF024B16+           CATAACTCGGTCGAGTTGAGTTGACTCACCCTAAACTCAAACCTTCCGCACGCACAACT 
JMFS027F07+           CATAACTCGGTCGAGTTGAGTTGACTCACCCTAAACTCAAACCTTCCGCACGCACAACTG
JMFF022A20+           CATAACTCGGTCGAGTTGAGTTGACTCACCCTAAACTCAAACCTTCCGC           
JMFF042E09+           CATAACTCGGTCGAGTTGAGTTGACTCACCCTAAACTCAAACCTTCCGCACGCACAACTG
JMFF002I20+           CATAACTCGGTCGAGTTGAGTTGACTCACCCTAAACTCAAACCTTCCGCACGCACAACTG
                      ____________________________________________________________
consensus             CATAACTCGGTCGAGTTGAGTTGACTCACCCTAAACTCAAACCTTCCGCACGCACAACTG
 
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JMSF050E19+           TCCTTAGTTAAAAAC-CATGTCCAT                                   
JMSF051F05+           TCCTTAGTTAAAAAC-CATGTCCAT                                   
JMFF003O16+           TCCTTAGTTAAAAAC-CATGTCCAT                                   
JMFS027F07+           TCCTTAGTTAAAAAC-CATGTCCATATAATAATAATTC                      
JMFF042E09+           TCCTTAGTTAAAAACNCATGTCCATATAATAATAATTCNCTATTGTCAGAGATTATTAGC
JMFF002I20+           TCCTTAGTTAAAAAC-CATGTCCATATAATAATAATTC-CTATTGTCAGAGATTATTAGC
                      ____________________________________________________________
consensus             TCCTTAGTTAAAAAC-CATGTCCATATAATAATAATTCNCTATTGTCAGAGATTATTAGC