| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF001F15 | Sequence | 494 | 001545 (12) | ref|XP_008792950.1| | 4e-64 | PREDICTED: 40S ribosomal protein S8 [Phoenix dactylifera] | 629 | 001545 (12) | ref|XP_006437243.1| | 2e-70 | hypothetical protein CICLE_v10032694mg [Citrus clementina] gb|ESR50483.1| hypoth |
| JMFF006G15 | Sequence | 493 | 001545 (12) | gb|AFW66128.1| | 1e-60 | putative ribosomal protein S8e family protein [Zea mays] gb|AFW66141.1| putative | 810 | 001545 (12) | ref|XP_006437243.1| | 4e-101 | hypothetical protein CICLE_v10032694mg [Citrus clementina] gb|ESR50483.1| hypoth |
| JMFF014L13 | Sequence | 587 | 001545 (12) | ref|XP_009778867.1| | 4e-80 | PREDICTED: 40S ribosomal protein S8-like [Nicotiana sylvestris] | |||||
| JMFF024E06 | Sequence | 427 | 001545 (12) | gb|AFW66128.1| | 6e-48 | putative ribosomal protein S8e family protein [Zea mays] gb|AFW66141.1| putative | 773 | 001545 (12) | ref|XP_006437243.1| | 2e-98 | hypothetical protein CICLE_v10032694mg [Citrus clementina] gb|ESR50483.1| hypoth |
| JMFF036B10 | Sequence | 472 | 001545 (12) | gb|KJB22170.1| | 1e-62 | hypothetical protein B456_004G033000 [Gossypium raimondii] | |||||
| JMFF042N17 | Sequence | 647 | 001545 (12) | ref|XP_009778867.1| | 6e-95 | PREDICTED: 40S ribosomal protein S8-like [Nicotiana sylvestris] | |||||
| JMFN016H16 | Sequence | 545 | 001545 (12) | gb|AFW66128.1| | 4e-64 | putative ribosomal protein S8e family protein [Zea mays] gb|AFW66141.1| putative | |||||
| JMSF041F13 | Sequence | 733 | 001545 (12) | ref|XP_006437243.1| | 2e-87 | hypothetical protein CICLE_v10032694mg [Citrus clementina] gb|ESR50483.1| hypoth | 681 | 001545 (12) | ref|XP_006437243.1| | 4e-88 | hypothetical protein CICLE_v10032694mg [Citrus clementina] gb|ESR50483.1| hypoth |
This contig is upended
. : . : . : . : . : . :
rJMFF001F15- A
JMSF041F13+ TTTTTTTTTTAAAACAAACCAGTTCAGAAGACCAA
rJMFF024E06- A
rJMFF006G15- A
____________________________________________________________
consensus TTTTTTTTTTAAAACAAACCAGTTCAGAAGACCAA
. : . : . : . : . : . :
rJMFF001F15- TAAAACGAAGTGCATACAAAACTTGTCCAAAACTACATAGTATCCAGCACAAGGAACCAA
JMSF041F13+ TAAAACGAAGTGCATACAAAACTTGTCCAAAACTACATAGTATCCAGCACAAGGAACCAA
rJMFF024E06- TAAAACGAAGTGCATACAAAACTTGTCCAAAACTACATAGTATCCAGCACAAGGAACCAA
rJMSF041F13- GTCCAAAACTACATAGTATCCAGCACAAGGAACCAA
rJMFF006G15- TAAAACGAAGTGCATACAAAACTTGTCCAAAACTACATAGTATCCAGCACAAGGAACCAA
____________________________________________________________
consensus TAAAACGAAGTGCATACAAAACTTGTCCAAAACTACATAGTATCCAGCACAAGGAACCAA
. : . : . : . : . : . :
rJMFF001F15- G-TGTCAATGTTGGTACACAAGGGAGGTGAGCAACAAAATAGAAAACTAGATTGACTTCA
JMSF041F13+ G-TGTCAATGTTGGTACACAAGGGAGGTGAGCAACAAAATAGAAAACTAGATTGACTTCA
rJMFF024E06- G-TGTCAATGTTGGTACACAAGGGAGGTGAGCAACAAAATAGAAAACTAGATTGACTTCA
rJMSF041F13- GCTGTCAATGTTGGTACACAAGGGAGGTGAGCAACAAAATAGAAAACTAGATTGACTTCA
rJMFF006G15- G-TGTCAATGTTGGTACACAAGGGAGGTGAGCAACAAAATAGAAAACTAGATTGACTTCA
____________________________________________________________
consensus G-TGTCAATGTTGGTACACAAGGGAGGTGAGCAACAAAATAGAAAACTAGATTGACTTCA
. : . : . : . : . : . :
rJMFF001F15- AAGGATCTTATAAGATCAGATGATGATTAGGCAGTTGCACCAGAACCTTTTCCCTTCTTC
JMSF041F13+ AAGGATCTTATAAGATCAGATGATGATTAGGCAGTTGCACCAGAACCTTTTCCCTTCTTC
rJMFF024E06- AAGGATCTTATAAGATCAGATGATGATTAGGCAGTTGCACCAGAACCTTTTCCCTTCTTC
rJMSF041F13- AAGGATCTTATAAGATCAGATGATGATTAGGCAGTTGCACCAGAACCTTTTCCCTTCTTC
rJMFF006G15- AAGGATCTTATAAGATCAGATGATGATTAGGCAGTTGCACCAGAACCTTTTCCCTTCTTC
____________________________________________________________
consensus AAGGATCTTATAAGATCAGATGATGATTAGGCAGTTGCACCAGAACCTTTTCCCTTCTTC
. : . : . : . : . : . :
rJMFF001F15- CTCTGAATCTTCTTCATGTAGAATTCCAGTTCCTTTCCTTCCAAGATATACCCATCAGCC
JMSF041F13+ CTCTGAATCTTCTTCATGTAGAATTCCAGTTCCTTTCCTTCCAAGATATACCCATCAGCC
rJMFF024E06- CTCTGAATCTTCTTCATGTAGAATTCCAGTTCCTTTCCTTCCAAGATATACCCATCAGCC
rJMSF041F13- CTCTGAATCTTCTTCATGTAGAATTCCAGTTCCTTTCCTTCCAAGATATACCCATCAGCC
rJMFF006G15- CTCTGAATCTTCTTCATGTAGAATTCCAGTTCCTTTCCTTCCAAGATATACCCATCAGCC
____________________________________________________________
consensus CTCTGAATCTTCTTCATGTAGAATTCCAGTTCCTTTCCTTCCAAGATATACCCATCAGCC
. : . : . : . : . : . :
rJMFF001F15- CTGCCACACTGGCCTGGTCGTGATGCAATGCATGCCATCAATCTGCCCGACCCAAACTGC
JMSF041F13+ CTGCCACACTGGCCTGGTCGTGATGCAATGCATGCCATCAATCTGCCCGACCCAAACTGC
rJMFF024E06- CTGCCACACTGGCCTGGTCGTGATGCAATGCATGCCATCAATCTGCCCGACCCAAACTGC
rJMSF041F13- CTGCCACACTGGCCTGGTCGTGATGCAATGCATGCCATCAATCTGCCCGACCCAAACTGC
rJMFF006G15- CTGCCACACTGGCCTGGTCGTGATGCAATGCATGCCATCAATCTGCCCGACCCAAACTGC
JMFF042N17+ CACTGGCCTGGTCGTGATGCAATGCATGCCATCAATCTGCCCGACCCAAACTGC
____________________________________________________________
consensus CTGCCACACTGGCCTGGTCGTGATGCAATGCATGCCATCAATCTGCCCGACCCAAACTGC
. : . : . : . : . : . :
rJMFF001F15- TCTTCAAGGTGGGAATCAAGCTTGCGATCTTTCTGACGTTTTTCAATCTTCCTTACCACA
JMSF041F13+ TCTTCAAGGTGGGAATCAAGCTTGCGATCTTTCTGACGTTTTTCAATCTTCCTTACCACA
rJMFF024E06- TCTTCAAGGTGGGAATCAAGCTTGCGATCTTTCTGACGTTTTTCAATCTTCCTTACCACA
rJMSF041F13- TCTTCAAGGTGGGAATCAAGCTTGCGATCTTTCTGACGTTTTTCAATCTTCCTTACCACA
rJMFF006G15- TCTTCAAGGTGGGAATCAAGCTTGCGATCTTTCTGACGTTTTTCAATCTTCCTTACCACA
JMFF042N17+ TCTTCAAGGTGGGAATCAAGCTTGCGATCTTTCTGACGTTTTTCAATCTTCCTTACCACA
JMFF014L13+ AGGTGGGAATCAAGCTTGCGATCTTTCTGACGTTTTTCAATCTTCCTTACCACA
____________________________________________________________
consensus TCTTCAAGGTGGGAATCAAGCTTGCGATCTTTCTGACGTTTTTCAATCTTCCTTACCACA
. : . : . : . : . : . :
rJMFF001F15- TGGTTACTCTTCTTGGTTTCCTCAGGTGCAGTTGCGCCTTCACCTTCCTCATTCGTTTCC
JMSF041F13+ TGGTTACTCTTCTTGGTTTCCTCAGGTGCAGTTGCGCCTTCACCTTCCTCATTCGTTTCC
rJMFF024E06- TGGTTACTCTTCTTGGTTTCCTCAGGTGCAGTTGCGCCTTCACCTTCCTCATTCGTTTCC
rJMSF041F13- TGGTTACTCTTCTTGGTTTCCTCAGGTGCAGTTGCGCCTTCACCTTCCTCATTCGTTTCC
rJMFF006G15- TGGTTACTCTTCTTGGTTTCCTCAGGTGCAGTTGCGCCTTCACCTTCCTCATTCGTTTCC
JMFF042N17+ TGGTTACTCTTCTTGGTTTCCTCAGGTGCAGTTGAGCCTTCACCTTCCTCATTCGTTTCC
JMFN016H16+ CCTCATTCGTTTCC
JMFF014L13+ TGGTTACTCTTCTTGGTTTCCTCAGGTGCAGTTGAGCCTTCACCTTCCTCATTCGTTTCC
JMFF006G15+ C
JMFF001F15+ CCTCATTCGTTTCC
____________________________________________________________
consensus TGGTTACTCTTCTTGGTTTCCTCAGGTGCAGTTGCGCCTTCACCTTCCTCATTCGTTTCC
. : . : . : . : . : . :
rJMFF001F15- TTCTTAGCAGCAGCCGACTTCTTCTTCCTACCAATATCAACACCATAGTGCTGAAGGTAC
JMSF041F13+ TTCTTAGCAGCAGCCGACTTCTTCTTCCTACCAATATCAACACCATAGTGCTGAAGGTAC
rJMFF024E06- TTCTTAGCAGCAGCCGACTTCTTCTTCCTACCAATATCAACACCATAGTGCTGAAGGTAC
rJMSF041F13- TTCTTAGCAGCAGCCGACTTCTTCTTCCTACCAATATCAACACCATAGTGCTGAAGGTAC
rJMFF006G15- TTCTTAGCAGCAGCCGACTTCTTCTTCCTACCAATATCAACACCATAGTGCTGAAGGTAC
JMFF042N17+ TTCTTAGCAGCAGCCGACTTCTTCTTCCTACCAATATCAACACCATAGTGCTGAAGGTAC
JMFN016H16+ TTCTTAGCAGCAGCCGACTTCTTCTTCCTACCAATATCAACACCATAGTGCTGAAGGTAC
JMFF014L13+ TTCTTAGCAGCAGCCGACTTCTTCTTCCTACCAATATCAACACCATAGTGCTGAAGGTAC
JMFF036B10+ TCTTAGCAGCAGCCGACTTCTTCTTCCTACCAATATCAACACCATAGTGCTGAAGGTAC
JMFF006G15+ TTCTTAGCAGCAGCCGACTTNTTNTTCCTACCAATATCAACACCATAGTGCTGAAGGTAC
JMFF001F15+ TTCTTAGCAGCAGCCGACTTCTTCTTCCTACCAATATCAACACCATAGTGCTGAAGGTAC
____________________________________________________________
consensus TTCTTAGCAGCAGCCGACTTCTTCTTCCTACCAATATCAACACCATAGTGCTGAAGGTAC
. : . : . : . : . : . :
rJMFF001F15- CATTGTTTGAATGGAGCAGCATCCACCTGAACAATGGCACTTTTCACCAGAGTTTGGGTC
JMSF041F13+ CATTGTTTGAATGGAGCAGCATCCACCTGAACAATGGCACTTTTCACCAGAGTTTGGGTC
rJMFF024E06- CATTGTTTGAATGGAGCAGCATCCACCTGAACAATGGCACTTTTCACCAGAGTTTGGGTC
rJMSF041F13- CATTGTTTGAATGGAGCAGCATCCACCTGAACAATGGCACTTTTCACCAGAGTTTGGGTC
rJMFF006G15- CATTGTTTGAATGGAGCAGCATCCACCTGAACAATGGCACTTTTCACCAGAGTTTGGGTC
JMFF042N17+ CATTGTTTGAATGGAGCAGCATCCACCTGAACAATGGCACTTTTCACCAGAGTTTGGGTC
JMFN016H16+ CATTGTTTGAATGGAGCAGCATCCACCTGAACAATGGCACTTTTCACCAGAGTTTGGGTC
JMFF014L13+ CATTGTTTGAATGGAGCAGCATCCACCTGAACAATGGCACTTTTCACCAGAGTTTGGGTC
JMFF036B10+ CATTGTTTGAATGGAGCAGCATCCACCTGAACAATGGCACTTTTCACCAGAGTTTGGGTC
JMFF006G15+ CATTGTTTGAATGGAGCAGCATCCNCCTGAACAATGGCACTTTTCACCAGAGTTTGGGTC
JMFF024E06+ TTTGAATGGAGCAGCATCCACCTGAACAATGGCACTTTTCACCAGAGTTTGGGTC
JMFF001F15+ CATTGTTTGAATGGAGCAGCATCCACCTGAACAATGGCACTTTTCACCAGAGTTTGGGTC
____________________________________________________________
consensus CATTGTTTGAATGGAGCAGCATCCACCTGAACAATGGCACTTTTCACCAGAGTTTGGGTC
. : . : . : . : . : . :
rJMFF001F15- CTCACAAGTTCATTGTTTGAGGCATTATATACCACATCAAGAATACGTGTCTTCC
JMSF041F13+ CTCACAAGTTCATTGTTTGAGGCATTATATACCACATCAAGAATACGTGTCTTCCGGGTA
rJMFF024E06- CTCACAAGTTCATTGTTTGAGGCATTATATACCACATCAAGAATACGTGTCTTCCGGGTA
rJMSF041F13- CTCACAAGTTCATTGTTTGAGGCATTATATACCACATCAAGAATACGTGTCTTCCGGGTA
rJMFF006G15- CTCACAAGTTCATTGTTTGAGGCATTATATACCACATCAAGAATACGTGTCTTCCGGGTA
JMFF042N17+ CTCACAAGTTCATTGTTTGAGGCATTATATACCACATCAAGAATACGTGTCTTCCGGGTA
JMFN016H16+ CTCACAAGTTCATTGTTTGAGGCATTATATACCACATCAAGAATACGTGTCTTCCGGGTA
JMFF014L13+ CTCACAAGTTCATTGTTTGAGGCATTATATACCACATCAAGAATACGTGTCTTCCGGGTA
JMFF036B10+ CTCACAAGTTCATTGTTTGAGGCATTATATACCACATCAAGAATACGTGTCTTCCGGGTA
JMFF006G15+ CTCACAAGTTCATTGTTTGAGGCATTATATACCACATCAAGAATACGTGTCTTCCGGGTA
JMFF024E06+ CTCACAAGTTCATTGTTTGAGGCATTATATACCACATCAAGAATACGTGTCTTCCGGGTA
JMFF001F15+ CTCACAAGTTCATTGTTTGAGGCATTATATACCACATCAAGAATACGTGTCTTCCGGGTA
____________________________________________________________
consensus CTCACAAGTTCATTGTTTGAGGCATTATATACCACATCAAGAATACGTGTCTTCCGGGTA
. : . : . : . : . : . :
JMSF041F13+ ACAGCTTCACTGCCCCATGAGTAGTTTCCTGTATCCAGCCTGAGTGCTCTCCACTTCACA
rJMFF024E06- ACAGCTTCACTGCCCCATGAGTAGTTTCCTGTATCCAGCCTGAGTGCTCTCCACTTCACA
rJMSF041F13- ACAGCTTCACTGCCCCATGAGTAGTTTCCTGTATCCAGCCTGAGTGCTCTCCACTTCACA
rJMFF006G15- ACAGCTTCACTGCCCCATGAGTAGTTTCCTGTATCCAGCCTGAGTGCTCTCCACTTCACA
JMFF042N17+ ACAGCTTCACTGCCCCATGAGTAGTTTCCTGTATCCAGCCTGAGTGCTCTCCACTTCACA
JMFN016H16+ ACAGCTTCACTGCCCCATGAGTAGTTTCCTGTATCCAGCCTGAGTGCTCTCCACTTCACA
JMFF014L13+ ACAGCTTCACTGCCCCATGAGTAGTTTCCTGTATCCAGCCTGAGTGCTCTCCACTTCACA
JMFF036B10+ ACAGCTTCACTGCCCCATGAGTAGTTTCCTGTATCCAGCCTGAGTGCTCTCCACTTCACA
JMFF006G15+ ACAGCTTCACTGCCCCATGAGTAGTTTCCTGTATCCAGCCTGAGTGCTCTCCACTTCACA
JMFF024E06+ ACAGCTTCACTGCCCCATGAGTAGTTTCCTGTATCCAGCCTGAGTGCTCTCCACTTCACA
JMFF001F15+ ACAGCTTCACTGCCCCATGAGTAGTTTCCTGTATCCAGCCTGAGTGCTCTCCACTTCACA
____________________________________________________________
consensus ACAGCTTCACTGCCCCATGAGTAGTTTCCTGTATCCAGCCTGAGTGCTCTCCACTTCACA
. : . : . : . : . : . :
JMSF041F13+ TTGCCTCCCCTAACTCGAACTCTCCTAACAGTCTTGTTG
rJMFF024E06- TTGCCTCCCCTAACTCGAACTCTCCTAACAGTCTTGTTGCTCGAGAGTTTAGTATTTGCT
rJMSF041F13- TTGCCTCCCCTAACTCGAACTCTCCTAACAGTCTTGTTG
rJMFF006G15- TTGCCTCCCCTAACTCGAACTCTCCTAACAGTCTTGTTGCTCGAGAGTTTAGTATTTGCT
JMFF042N17+ TTGCCTCCCCTAACTCGAACTCTCCTAACAGTCTTGTTGCTCGAGAGTTTAGTATTTGCT
JMFN016H16+ TTGCCTCCCCTAACTCGAACTCTCCTAACAGTCTTGTTGCTCGAGAGTTTAGTATTTGCT
JMFF014L13+ TTGCCTCCCCTAACTCGAACTCTCCTAACAGTCTTGTTGCTCGAGAGTTTAGTATTTGCT
JMFF036B10+ TTGCCTCCCCTAACTCGAACTCTCCTAACAGTCTTGTTGCTCGAGAGTTTAGTATTTGCT
JMFF006G15+ TTGCCTCCCCTAACTCGAACTCTCCTAACAGTCTTGTTGCTCGAGAGTTTAGTATTTGCT
JMFF024E06+ TTGCCTCCCCTAACTCGAACTCTCCTAACAGTCTTGTTGCTCGAGAGTTTAGTATTTGCT
JMFF001F15+ TTGCCTCCCCTAACTCGAACTCTCCTAACAGTCTTGTTGCTCGAGAGTTTAGTATTTGCT
____________________________________________________________
consensus TTGCCTCCCCTAACTCGAACTCTCCTAACAGTCTTGTTGCTCGAGAGTTTAGTATTTGCT
. : . : . : . : . : . :
rJMFF024E06- GGCTGACGCCCAAGCTCATACTTTCTCTTCTTCCTCCATGCCTTCTTCTTGCC
rJMFF006G15- GGCTGACGCCCAAGCTCATACTTTCTCTTCTTCCTCCATGCCTTCTTCTTGCCACCAGTG
JMFF042N17+ GGCTGACGCCCAAGCTCATACTTTCTCTTCTTCCTCCATGCCTTCTTCTTGCCACCAGTG
JMFN016H16+ GGCTGACGCCCAAGCTCATACTTTCTCTTCTTCCTCCATGCCTTCTTCTTGCCACCAGTG
JMFF014L13+ GGCTGACGCCCAAGCTCATACTTTCTCTTCTTCCTCCATGCCTTCTTCTTGCCACCAGTG
JMFF036B10+ GGCTGACGCCCAAGCTCATACTTTCTCTTCTTCCTCCATGCCTTCTTCTTGCCACCAGTG
JMFF006G15+ GGCTGACGCCCAAGCTCATACTTTCTCTTNTTCCTCCATGCCTTCTTCTTGCCACCAGTG
JMFF024E06+ GGCTGACGCCCAAGCTCATACTTTCTCTTCTTCCTCCATGCCTTCTTCTTGCCACCAGTG
JMFF001F15+ GGCTGACGCCCAAGCTCATACTTTCTCTTCTTCCTCCATGCCTTCTTCTTGCCACCAGTG
____________________________________________________________
consensus GGCTGACGCCCAAGCTCATACTTTCTCTTCTTCCTCCATGCCTTCTTCTTGCCACCAGTG
. : . : . : . : . : . :
rJMFF006G15- GCTCGCCTCTTGTGCATCGAATCTCTTGA
JMFF042N17+ GCTCGCCTCTTGTGCATCGAATCTCTTGAGATACCCATAGCTGCGTTGGTGCTATAGAGA
JMFN016H16+ GCTCGCCTCTTGTGCATCGAATCTCTTGAGATACCCATAGCTGCGTTGGTGCTATAGAGA
JMFF014L13+ GCTCGCCTCTTGTGCATCGAATCTCTTGAGATACCCATAGCTGCGTTGGTGCTATAGAGA
JMFF036B10+ GCTCGCCTCTTGTGCATCGAATCTCTTGAGATACCCATAGCTGCGTTGGTGCTATAGAGA
JMFF006G15+ GCTCGCCTCTTGTGCATCGAATCTCTTGAGATACCCAT
JMFF024E06+ GCTCGCCTCTTGTGCATCGAATCTCTTGAGATACCCAT
JMFF001F15+ GCTCGCCTCTTGTGCATCGAATCTCTTGAGATACCCATAGCTGCGTTGGTGCTATAGAGA
____________________________________________________________
consensus GCTCGCCTCTTGTGCATCGAATCTCTTGAGATACCCATAGCTGCGTTGGTGCTATAGAGA
. : . : . : . : . : . :
JMFF042N17+ TTCTCTTCAGCTTCACTCACTCACTCACTCTCTCTCTCTCTCTCTCTCT
JMFN016H16+ TTCTC
JMFF014L13+ TTCTCTTCAGCTTCACTCACTCACTCACTCTCTCTCTCTCTCTCTCTCT
JMFF036B10+ TTCTCTTCAGCTTCACTCACTCACTCACTCTCTCTCTCTCTCTCTCTCT
JMFF001F15+ TTCTCTTCAGCTTCACTCACTCACTCACTCTCTCTCTCTCTCTCTCTCTCACTCTCTTTC
____________________________________________________________
consensus TTCTCTTCAGCTTCACTCACTCACTCACTCTCTCTCTCTCTCTCTCTCTCACTCTCTTTC