Contig 001542:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP018B01Sequence194001542 (2)ref|XP_009613979.1|2e-04PREDICTED: non-specific lipid-transfer protein 2 {ECO:0000303|PubMed:23913675}-l
JMCP020A08Sequence193001542 (2)

Alignment

This contig is upended


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JMCP020A08+                                                           ACGAAACGAGCT
rJMCP018B01+                                                        GTACGAAACGAGCT
                      ____________________________________________________________
consensus                                                           GTACGAAACGAGCT
 
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JMCP020A08+           CATCACTCTTTATTCAATGATCAAAAGAGCCAAACAAGGCATATTATTTCATATTATTCT
rJMCP018B01+          CATCACTCTTTATTCAATGATCAAAAGAGCCAAACAAGGCATATTATTTCATATTATTCT
                      ____________________________________________________________
consensus             CATCACTCTTTATTCAATGATCAAAAGAGCCAAACAAGGCATATTATTTCATATTATTCT
 
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JMCP020A08+           CTGTACCGTATGCACTACACAGTACAGTATTGGTATATATAGAACTATAATTAACTGGAG
rJMCP018B01+          CTGTACCGTATGCACTACACAGTACAGTATTGGTATATATAGAACTATAATTAACAGGAG
                      ____________________________________________________________
consensus             CTGTACCGTATGCACTACACAGTACAGTATTGGTATATATAGAACTATAATTAACTGGAG
 
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JMCP020A08+           GGGATAGAGACGCCGCAAGAGCTAGCGACCTTTCTAGCATTCGGAGAGTTGACGTAGTGC
rJMCP018B01+          GGGATAGAGACGCCGCAAGAGCTAGCGACCTTTCTAGCATTCGGAGAGTTGACGTAGTGC
                      ____________________________________________________________
consensus             GGGATAGAGACGCCGCAAGAGCTAGCGACCTTTCTAGCATTCGGAGAGTTGACGTAGTGC