Contig 001538:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP006D08Sequence152001538 (2)
JMCP009D01Sequence126001538 (2)

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMCP006D08+                                       GGAACAATAATTTATTATAAAAAGTTAATCAA
rJMCP009D01+                                                                 ATCAA
                      ____________________________________________________________
consensus                                         GGAACAATAATTTATTATAAAAAGTTAATCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMCP006D08+           TCAAACACTTATATTGACTTTTAACCCAGTTAAACAAATTAAAATTTGCTGATAAGCTAT
rJMCP009D01+          TCAAACACTTATATTGACTTTTAACCCAGTTAAACAAATTAAAATTTGCTGATAAGCTAT
                      ____________________________________________________________
consensus             TCAAACACTTATATTGACTTTTAACCCAGTTAAACAAATTAAAATTTGCTGATAAGCTAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMCP006D08+           GTTACCAAACAGAAACAATATACTTCTGCTGTAGTTTCTTCTTCTTCTTCAATCTACTCG
rJMCP009D01+          GTTACCAAACAGAAACAATATACTTCTGCTGTAGTTTCTTCTTCTTCTTCAATCTACTCG
                      ____________________________________________________________
consensus             GTTACCAAACAGAAACAATATACTTCTGCTGTAGTTTCTTCTTCTTCTTCAATCTACTCG