Contig 001536:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP008F11Sequence223001536 (2)ref|XP_010253328.1|7e-13PREDICTED: serine/threonine-protein kinase AFC1 isoform X1 [Nelumbo nucifera]
JMCP020G01Sequence221001536 (2)ref|XP_010253328.1|7e-13PREDICTED: serine/threonine-protein kinase AFC1 isoform X1 [Nelumbo nucifera]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMCP020G01+ TCCATCAATTGCAGACTTGGATTTTGATATTAATAAATGAA
rJMCP008F11+ ATTCCATCAATTGCAGACTTGGATTTTGATATTAATAAATGAA
                      ____________________________________________________________
consensus ATTCCATCAATTGCAGACTTGGATTTTGATATTAATAAATGAA
 
. : . : . : . : . : . :
rJMCP020G01+ TTATTTCCATTTTTGTCCAAAGTCAAGGCATTAATATGAGAAAAAGAATATGTTATTTAC
rJMCP008F11+ TTATTTCCATTTTTGTCCAAAGTCAAGGCATTAATATGAGAAAAAGAATATGTTATTTAC
                      ____________________________________________________________
consensus TTATTTCCATTTTTGTCCAAAGTCAAGGCATTAATATGAGAAAAAGAATATGTTATTTAC
 
. : . : . : . : . : . :
rJMCP020G01+ AGACCACACCTTCTTCTCAAGTCTCTGGTGAAGAAAGGGTGCCTCAGAGCTTCCCTTGCT
rJMCP008F11+ AGACCACACCTTCTTCTCAAGTCTCTGGTGAAGAAAGGGTGCCTCAGAGCTTCCCTTGCT
                      ____________________________________________________________
consensus AGACCACACCTTCTTCTCAAGTCTCTGGTGAAGAAAGGGTGCCTCAGAGCTTCCCTTGCT
 
. : . : . : . : . : . :
rJMCP020G01+ TTGAGCCGCTCTGCTGGCTCATAACGCATCAGCCCTTGCAAGAGATCAATAAGATCCCCC
rJMCP008F11+ TTGAGCCGCagaGCTGGCTCATAACGCATCAGCCCTTGCAAGAGATgtATAAGATCCCCC
                      ____________________________________________________________
consensus TTGAGCCGCTCTGCTGGCTCATAACGCATCAGCCCTTGCAAGAGATCAATAAGATCCCCC