Contig 001536:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP008F11Sequence223001536 (2)ref|XP_010253328.1|7e-13PREDICTED: serine/threonine-protein kinase AFC1 isoform X1 [Nelumbo nucifera]
JMCP020G01Sequence221001536 (2)ref|XP_010253328.1|7e-13PREDICTED: serine/threonine-protein kinase AFC1 isoform X1 [Nelumbo nucifera]

Alignment

This contig is upended


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rJMCP020G01+                             TCCATCAATTGCAGACTTGGATTTTGATATTAATAAATGAA
rJMCP008F11+                           ATTCCATCAATTGCAGACTTGGATTTTGATATTAATAAATGAA
                      ____________________________________________________________
consensus                              ATTCCATCAATTGCAGACTTGGATTTTGATATTAATAAATGAA
 
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rJMCP020G01+          TTATTTCCATTTTTGTCCAAAGTCAAGGCATTAATATGAGAAAAAGAATATGTTATTTAC
rJMCP008F11+          TTATTTCCATTTTTGTCCAAAGTCAAGGCATTAATATGAGAAAAAGAATATGTTATTTAC
                      ____________________________________________________________
consensus             TTATTTCCATTTTTGTCCAAAGTCAAGGCATTAATATGAGAAAAAGAATATGTTATTTAC
 
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rJMCP020G01+          AGACCACACCTTCTTCTCAAGTCTCTGGTGAAGAAAGGGTGCCTCAGAGCTTCCCTTGCT
rJMCP008F11+          AGACCACACCTTCTTCTCAAGTCTCTGGTGAAGAAAGGGTGCCTCAGAGCTTCCCTTGCT
                      ____________________________________________________________
consensus             AGACCACACCTTCTTCTCAAGTCTCTGGTGAAGAAAGGGTGCCTCAGAGCTTCCCTTGCT
 
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rJMCP020G01+          TTGAGCCGCTCTGCTGGCTCATAACGCATCAGCCCTTGCAAGAGATCAATAAGATCCCCC
rJMCP008F11+          TTGAGCCGCagaGCTGGCTCATAACGCATCAGCCCTTGCAAGAGATgtATAAGATCCCCC
                      ____________________________________________________________
consensus             TTGAGCCGCTCTGCTGGCTCATAACGCATCAGCCCTTGCAAGAGATCAATAAGATCCCCC