| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMCP002C02 | Sequence | 471 | 001534 (24) | ref|XP_009618543.1| | 9e-08 | PREDICTED: probable serine/threonine-protein kinase clkA [Nicotiana tomentosifo | |||||
| JMCP003A04 | Sequence | 622 | 001534 (24) | ref|XP_009769426.1| | 4e-08 | PREDICTED: homeobox protein 2-like [Nicotiana sylvestris] | |||||
| JMCP003H05 | Sequence | 615 | 001534 (24) | ref|XP_009618543.1| | 2e-08 | PREDICTED: probable serine/threonine-protein kinase clkA [Nicotiana tomentosifo | |||||
| JMCP004E10 | Sequence | 547 | 001534 (24) | ref|XP_009618543.1| | 1e-07 | PREDICTED: probable serine/threonine-protein kinase clkA [Nicotiana tomentosifo | |||||
| JMCP004G02 | Sequence | 585 | 001534 (24) | ref|XP_009618543.1| | 2e-07 | PREDICTED: probable serine/threonine-protein kinase clkA [Nicotiana tomentosifo | |||||
| JMCP005C08 | Sequence | 502 | 001534 (24) | ref|XP_009618543.1| | 1e-07 | PREDICTED: probable serine/threonine-protein kinase clkA [Nicotiana tomentosifo | |||||
| JMCP007E08 | Sequence | 517 | 001534 (24) | ref|XP_009618543.1| | 1e-07 | PREDICTED: probable serine/threonine-protein kinase clkA [Nicotiana tomentosifo | |||||
| JMCP007F07 | Sequence | 468 | 001534 (24) | ref|XP_009618543.1| | 9e-08 | PREDICTED: probable serine/threonine-protein kinase clkA [Nicotiana tomentosifo | |||||
| JMCP007H09 | Sequence | 581 | 001534 (24) | ref|XP_009618543.1| | 1e-07 | PREDICTED: probable serine/threonine-protein kinase clkA [Nicotiana tomentosifo | |||||
| JMCP008D07 | Sequence | 612 | 001534 (24) | ref|XP_009769426.1| | 4e-08 | PREDICTED: homeobox protein 2-like [Nicotiana sylvestris] | |||||
| JMCP009B02 | Sequence | 509 | 001534 (24) | ref|XP_009769426.1| | 2e-08 | PREDICTED: homeobox protein 2-like [Nicotiana sylvestris] | |||||
| JMCP009B09 | Sequence | 581 | 001534 (24) | ref|XP_009618543.1| | 5e-08 | PREDICTED: probable serine/threonine-protein kinase clkA [Nicotiana tomentosifo | |||||
| JMCP010D06 | Sequence | 570 | 001534 (24) | ref|XP_009618543.1| | 1e-07 | PREDICTED: probable serine/threonine-protein kinase clkA [Nicotiana tomentosifo | |||||
| JMCP010D07 | Sequence | 579 | 001534 (24) | ||||||||
| JMCP018G11 | Sequence | 588 | 001534 (24) | ref|XP_009618543.1| | 2e-07 | PREDICTED: probable serine/threonine-protein kinase clkA [Nicotiana tomentosifo | |||||
| JMCP020E10 | Sequence | 414 | 001534 (24) | ref|XP_009618543.1| | 7e-08 | PREDICTED: probable serine/threonine-protein kinase clkA [Nicotiana tomentosifo | |||||
| JMFF003B22 | Sequence | 520 | 001534 (24) | ref|XP_009618543.1| | 6e-08 | PREDICTED: probable serine/threonine-protein kinase clkA [Nicotiana tomentosifo | 626 | 014801 | dbj|BAM28759.1| | 4e-07 | ROX1 homologue [Nicotiana tabacum] |
| JMFF025H01 | Sequence | 479 | 004645 (11) | ref|XP_011086042.1| | 90.5 | PREDICTED: LOW QUALITY PROTEIN: protein E6-like [Sesamum indicum] | 541 | 001534 (24) | |||
| JMFF045B10 | Sequence | 619 | 004645 (11) | ref|XP_011086042.1| | 90.5 | PREDICTED: LOW QUALITY PROTEIN: protein E6-like [Sesamum indicum] | 284 | 001534 (24) | |||
| JMFF049F20 | Sequence | 627 | 004645 (11) | ref|XP_011086042.1| | 90.9 | PREDICTED: LOW QUALITY PROTEIN: protein E6-like [Sesamum indicum] | 533 | 001534 (24) | ref|XP_009769426.1| | 6e-09 | PREDICTED: homeobox protein 2-like [Nicotiana sylvestris] |
| JMFS100F01 | Sequence | 612 | 001534 (24) | ref|XP_009618543.1| | 2e-07 | PREDICTED: probable serine/threonine-protein kinase clkA [Nicotiana tomentosifo | |||||
| JMSF023A06 | Sequence | 486 | 004645 (11) | ref|XP_011086042.1| | 90.5 | PREDICTED: LOW QUALITY PROTEIN: protein E6-like [Sesamum indicum] | 669 | 001534 (24) | ref|XP_009618543.1| | 3e-04 | PREDICTED: probable serine/threonine-protein kinase clkA [Nicotiana tomentosifo |
| JMSF046E16 | Sequence | 767 | 004645 (11) | ref|XP_009758887.1| | 2e-18 | PREDICTED: probable serine/threonine-protein kinase clkA, partial [Nicotiana sy | 543 | 001534 (24) | |||
| JMSF046F10 | Sequence | 720 | 004645 (11) | ref|XP_009758887.1| | 2e-18 | PREDICTED: probable serine/threonine-protein kinase clkA, partial [Nicotiana sy | 620 | 001534 (24) | |||
This contig is upended
. : . : . : . : . : . :
rJMSF046E16- CNTCTGTCGAGTTTAATATNTAGATTTG
JMCP003H05+ AGTTTAATATATAGATTTc
JMCP003A04+ ATATATAGATTTG
rJMFF025H01- TATATAGATTTG
rJMCP008D07+ AGTTTAATATATAGATTTG
____________________________________________________________
consensus CNTCTGTCGAGTTTAATATATAGATTTG
. : . : . : . : . : . :
rJMSF046E16- GTCNAGACCAGATTGACACAAAACCATAGTTTCATGGTCTCATTCACACACAATATAACT
JMCP003H05+ cagatcACCAG-TTGtgtgttAACCATAGTTTCATccagagtTagtgtgtgttTATAACT
JMCP003A04+ GagTAGACCAG-TTGACACAAAACCATAGTTTCATGGTCTCATTCACAgtgAATATAACT
JMFS100F01+ CT
JMCP007H09+ CACAAAACCATAGTTTCATccagagtTTCACAgtgAATATAACT
JMCP009B09+ ACACAAAACCATAGTTTCATccagagtTTCACAgtgAATATAACT
rJMFF045B10- GACACAAAACCATAGTTTCATGGGCTCCTTCCCCCCCCATATAACT
JMCP018G11+ TTGACACAAAACCATAGTTTCATGGagaCATTCACAgtgAATATAACT
JMCP004E10+ GACACAAAACCATAGTTTCATGGagaCATTCACACACAATATAACT
rJMFF049F20- TCTCATTCACACACAATATAACT
rJMFF025H01- GTCTAGACCAG-TTGACACAAAACCATAGTTTCATGGTCTCATTCACACACAATATAACT
rJMCP008D07+ cagatcACCAG-TTGACACAAAACCATAGTTTCATccagagtTTCAgtgtgAATATAACT
JMCP010D06+ GTTTgtTcGaaagtTagtgtgggttaATAtCa
JMCP010D07+ AAACCtTtGTTTCATcGaaagtTTgtgtgtgttTATAACT
rJMSF046F10- TCTCATTCACACACAATATAACT
rJMCP004G02+ GACACAAAACCATAGTTTCATGGTCTCATTCACACACAATATAACT
____________________________________________________________
consensus GTCTAGACCAG-TTGACACAAAACCATAGTTTCATGGTCTCATTCACACACAATATAACT
. : . : . : . : . : . :
rJMSF046E16- ATAGAGACAGGAGATAATTAATAACCTATGAACAAATCTATAGCTTAATCATCATCAACA
JMCP003H05+ AatctcAgAGGAGATAATTAATAACCTATGAACAAAagaAaAGCTTAATCATCATCAACA
JMCP003A04+ ATAGAGACAGGAGATAATTAATAACCTATGAACAAATCTATAGCTTAATCATCATCAACA
JMFS100F01+ ATAGAGACAGGAGATAATTAATAACCTATGAACAAATCTATAGCTTAATCATCATCAACA
rJMSF023A06- TAGAGACAGGAGATAATTAATAACCTATGAACAAATCTATAGCTTAATCATCATCAACA
JMCP007H09+ ATAGAGACAGGAGATAATTAATAACCTATGAACAAAagaATAcgTTAATCATCATCAACA
JMCP009B09+ ATAGAGACAGGAGATAATTAATAACCTATGAACAAAagaATAGCTTAATCATCATCAACA
rJMFF045B10- ATAGAGACCGGGGATAATTAATAACCTATGAACAAATCTATAGCTTAATCCTCATCAACA
JMCP018G11+ ATAGAGACAGGAGATAATTAATAACCTATGAACAAAagaATAGCTTAATCATCATCAACA
JMCP004E10+ ATAGAGACAGGAGATAATTAATAACCTATGAACAAATCTATAGCTTAATCATCATCAACA
rJMFF049F20- ATAGAGACAGGAGATAATTAATAACCTATGAACAAATCTATAGCTTAATCATCATCAACA
rJMFF025H01- ATAGAGACAGGAGATAATTAATAACCTATGAACAAATCTATAGCTTAATCATCATCAACA
rJMCP008D07+ ATAGAGACAGGAGATAATTAATAACCTATGAACAAAagaATAGCTTAATCAaCATCAACA
rJMCP009B02+ GAACAttagataAcgaattagtagtaCAACA
JMCP010D06+ tatctcAgtcctcATAATTAAattCCataGAtgAttaaaAaAcgaattagtagtTCAACA
JMCP010D07+ ATAGAGAgtcGAGATAATTAATAACCTATGAACAttagaATAcgTTAAagtagtTCAACA
JMCP005C08+ TAGCTTAATCATCATCAACA
rJMCP007E08+ AATAACCTATGAACAAAagaATAGCTTAATCATCATCAACA
rJMSF046F10- ATAGAGACAGGAGATAATTAATAACCTATGAACAAATCTATAGCTTAATCATCATCAACA
rJMCP004G02+ ATAGAGACAGGAGATAATTAATAACCTATGAACAAATCTATAGCTTAATCATCATCAACA
____________________________________________________________
consensus ATAGAGACAGGAGATAATTAATAACCTATGAACAAATCTATAGCTTAATCATCATCAACA
. : . : . : . : . : . :
rJMSF046E16- TATTCACCCCTAAACAACCATAATTTAACACACAATCAAACACCCAGTCGTGTGTTTAAT
JMCP003H05+ aATTCACCCCTAAACAACCATAATTTAACAgtgAATCAAACACCgtcagcTGTGTTTAAT
JMCP003A04+ TATTCACCCCTAAACAACCATAATTTAACACACAATCAAACACCCAGTCGTGTGTTTAAT
JMFS100F01+ TATTCACCCCTAAACAACCATAATTTAACACACAATCAAACACCCAGTCGTGTGTTTAAT
rJMSF023A06- TATTCACCCCTAAACAACCATAATTTAACACACAATCAAACACCCAGTCGTGTGTTTAAT
JMCP007H09+ TATTCACCCCTAAACAACCATAATTTAACACACAATCAAACACCCAGTgcTGTGTTTAAT
JMCP009B09+ TATTCACCCCTAAACAACCATAATTTAACACACAATCAAACACCCAGTCcTGTGTTTAAT
rJMFF045B10- TATTCCCCCCTAAACAACCATAATTTAACCCCCAATCAAACCCCCCGGCGGGGGGTTAAT
JMCP018G11+ TATTCACCCCTAAACAACCATAATTTAACACACAATCAAACACCCAGagcTGTcCTTAAT
JMCP004E10+ TATTCACCCCTAAACAACCATAATTTAACACACAATCAAACACCCAGTCGTGTGTTTAAT
rJMCP007F07+ CTAAACAACCATAATTTAACACACAATCAAACACCCAGTCGTGTGTTTAAT
rJMFF049F20- TATTCACCCCTAAACAACCATAATTTAACACACAATCAAACACCCAGTCGTGTGTTTAAT
rJMFF025H01- TATTCACCCCTAAACAACCATAATTTAACACACAATCAAACACCCAGTCGTGTGTTTAAT
rJMCP008D07+ TATTCACCCCTAAACAACCATAATTTAACAgtgAATCAAACACCgtcagcTGTGTTTAAT
rJMCP009B02+ ataagtCCCCTAAACAACCATAATTTttgtgtgAAagtAAgtgCgtcagcTGTGTTTAAT
JMCP010D06+ ataTgtgCCCTAAtgtACCtaAATTTAAgtgtgAATCAAAgtgCgtcagcacacTTTAAT
JMCP010D07+ TATTCACCCCTAAACAACCATAATTTAACAgtgAATCAAACtgCgtcagcTGTGTTTAAT
JMCP005C08+ TATTCACCCCTAAACAACCATAATTTAACACACAATCAAACACCCAGTCGTGTGTTTAAT
rJMCP007E08+ TATTCACCCCTAAACAACCATAATTTAACACACAATCAAACACCCGGTCGTGTGTTTAAT
JMCP002C02+ CCCCTAAACAACCATAATTTAACAgtgAATCAAACACCgtcTCGTGTGTTTAAT
rJMSF046F10- TATTCACCCCTAAACAACCATAATTTAACACACAATCAAACACCCAGTCGTGTGTTTAAT
rJMCP004G02+ TATTCACCCCTAAACAACCATAATTTAACACACAATCAAACACCCAGTCGTGTGTTTAAT
____________________________________________________________
consensus TATTCACCCCTAAACAACCATAATTTAACACACAATCAAACACCCAGTCGTGTGTTTAAT
. : . : . : . : . : . :
rJMSF046E16- TTGCAGATTTTGGGACTCCGTCACATGATCATCTTTTAACTTTGTAG-AAAAAAAAAAAA
JMCP003H05+ TTGCAGATTTTGGGtgaggGTCAgATGATCAagaTTTAACTTTGTAG-AAAAAAAA-AAA
JMCP003A04+ TTGCAGATTTTGGGACTCCGTCACATGATCATCTTTTAACTTTGTAG-AAAAAA---AAA
JMFS100F01+ TTGCAGATTTTGGGACTCCGTCACATGATCATCTTTTAACTTTGTAG-AAAAAAAA-AAA
rJMSF023A06- TTGCAGATTTTGGGACTCCGTCACATGATCATCTTTTAACTTTGTAG-AAAAAAAA-AAA
JMCP007H09+ TTGCAGATTTTGGGtgaggGTCACATGATCAagaTTTAACTTTGTAG-AAAAAAAA-AAA
JMCP009B09+ TTGCAGATTTTGGGtgaCCGTCACATGATCAagaTTTAACTTTGTAG-AAAAAAA--AAA
rJMFF045B10- TTGCAAATTTTGGGACTCCGCCACATGAACATCTTTTAACTTTGGA--AAAAAAAAAAAA
JMCP018G11+ TTGCAGATTTTGGGtgaCCGTCACATGATCAagaTTTAACTTTGTAG-AAAAAAAA-AAA
JMFF003B22+ ACATGATCATNTTTTAACTTTGTAG-AAAAAAA--AAA
JMCP004E10+ TTGCAGATTTTGGGtgaCCGTCACATGATCAagaTTTAACTTTGTAG-AAAAAAA--AAA
rJMCP007F07+ TTGCAGATTTTGGGACTCCGTCACATGATCATCTTTTAACTTTGTAG-AAAAAAGA-AAA
rJMFF049F20- TTGCAGATTTTGGGACTCCGTCACATGATCATCTTTTAACTTTGTAGAAAAAAAAAAAAA
rJMFF025H01- TTGCAGATTTTGGGACTCCGTCACATGATCATCTTTTAACTTTGTAG-AAAAAAAAAAAA
rJMCP008D07+ TTGCAGATTTTGGGtgaCCGTCAgtaGATCAagaTTTAACTTTGTAG-AAAAAAAA-AAA
rJMCP009B02+ TTGCAGATTTTGcctgaggGagtgtaGAagtaaaaaTAtCTTTGTAG-AAAAAAAAAAAA
JMCP010D06+ TTGCtcATTTTGGGtgaggGTgtgtactagtaaaaaTAACTTaGTtc-AAAAAAAAAAAA
JMCP010D07+ TTGCAGATTTTGGGtgaCgGTgtgtactTgtagaaaTAACTTaGTAG-AAAAAAAAAAAA
JMCP005C08+ TTGCAGATTTTGGGtgaCCGTCACATGATCAagaTTTAACTTTGTAG-AAAAAAA--AAA
JMCP020E10+ TGCAGATTaaGcctgaggGTCACATGATCATCaaaTAACaaacaAG-AAAAAA---AAA
rJMCP007E08+ TTGCAGATTTTGGGACaCCGTCACATGATCAagaTTTAACTTTGTAG-AAAAAAA--AAA
JMCP002C02+ TTGCAGATTTTGGGtgaCCGTgtgtaGATCAagaTTTAACTTTGTAG-AAAAAAA--AAA
rJMSF046F10- TTGCAGATTTTGGGACTCCGTCACATGATCATCTTTTAACTTTGTAG-AAAAAAAAAAAA
rJMCP004G02+ TTGCAGATTTTGGGACTCCGTCACATGATCATCTTTTAACTTTGTAG-AAAAAAAAGAAA
____________________________________________________________
consensus TTGCAGATTTTGGGACTCCGTCACATGATCATCTTTTAACTTTGTAG-AAAAAAAA-AAA
. : . : . : . : . : . :
rJMSF046E16- ATTGTTAAGGAATCNCAGGGAAGGNCTTCTNGGNCCNGGAACNCCNCCATATTCGGGNAG
JMCP003H05+ ATTGTTAAGGAATCTCAGGGAAGGTCTTCTTGGTCCTGGAACTCCTCCATATTCTGGTAG
JMCP003A04+ ATTGTTAAGGAATCTCAGGGAAGGTCTTCTTGGTCCTGGAACTCCTCCATATTCTGGTAG
JMFS100F01+ ATTGTTAAGGAATCTCAGGGAAGGTCTTCTTGGTCCTGGAACTCCTCCATATTCTGGTAG
rJMSF023A06- ATTGTTAAGGAATCTCAGGGAAGGTCTTCTTGGTCCNGGAACTCCNCCATATTCNGGTAG
JMCP007H09+ ATTGTTAAGGAATCTCAGGcttccagTTCTTGGTCCTGGAAgaCCTCCATATTCTGGTAG
JMCP009B09+ ATTGTTAAGGAATCTCAGGGAAGGTCTTCTTGGTCCTGGAACTCCTCCATATCCTGGTAG
rJMFF045B10- ATTGTTAAGGAATCTCAGGGAAGGGCTTCTTGGGCCTGGAACTCCCCCATATTCTGG
JMCP018G11+ ATTGTTAAGGAATCTCAGGGAAGGTCTTCTTGGTCCTGGAACTCCTCCATATTCTGGTAG
JMFF003B22+ ATTGTTAAGGAATCTCAGGGAAGGTCTTCTTGGTCCTGGAACTCCTCCATATTCTGGTAG
JMCP004E10+ ATTGTTAAGGAATCTCAGGGAAGGTCTTgaTGGTCCTGGAACTCCTCCATATagaGGTAG
rJMCP007F07+ ATTGTTAAGGAATCTCAGGGAAGGTCTTCTTGGTCCTGGAGCTCCTCCATATTCTGGTAG
rJMFF049F20- ATTGTTAAGGAATCTCAGGGAAGGTCTTCTTGGTCCTGGAACTCCTCCATATTCTGGTAG
rJMFF025H01- ATTGTTAAGGAATCTCAGGGAAGGTCTTCTTGGNCCNGGAACTCCTCCANATTCNGGNAG
rJMCP008D07+ ATTGTTAAGGAATCTCAGGGAAGGTCTTCTTGGTCCTGGAACTCCTCCATATTCTGGTAG
rJMCP009B02+ GTTGTTAAGGAATCTCAGGGAAGGTCTTCTTTGTCCTGGAACTCCTCCGTATTCTGGTAG
JMCP010D06+ ATTGTTAAGGAATCTCAGGGAAGGTCTTCTTGGTCCTGGAACTCCTCCATATTCTGGTAG
JMCP010D07+ ATTGTTAAGGAATCTCAGGGAAGGTCTTCTTGGTCCTGGAACTCCTCCATATTCTGGTAG
JMCP005C08+ ATTGTTAAGGAATCTCAGGGAAGGTCTTCTTGGTCCTGGAACTCCTCCATATTCTGGTAG
JMCP020E10+ ATTGTTAAGGAATCTCAGGGAAGGTCTTCTTGGTCCTGGAACTCCTCCATATTCTGGTAG
rJMCP007E08+ ATTGTTAAGGAATCTCAGGGAAGGTCTTCTTGGTCCTGGAACTCCTCCATATTCTGGTAG
JMCP002C02+ ATTGTTAAGGAATCaCAGGGAAGGTCTagaTGGTCCTGGAACTCCTCCATATagaGGTAG
rJMSF046F10- ATTGTTAAGGAATCNCAGGGAAGGNCTTCTNGGNCCNGGAACNCCNCCATATTCNGGTAG
rJMCP004G02+ ATTGTTAAGGAATCTCAGGGAAGGTCTTCTTGGTCCTGGGACTCCTCCATATTCTGGTAG
____________________________________________________________
consensus ATTGTTAAGGAATCTCAGGGAAGGTCTTCTTGGTCCTGGAACTCCTCCATATTCTGGTAG
. : . : . : . : . : . :
rJMSF046E16- TNGTTCNCCANGAANCCATNGTNGTTGTTGTTGTTGTTGCCAAANCCNCCATNGTTGTTG
JMCP003H05+ TTGTTCTCCATGAATCCATCGTTGTTGTTGTTGTTGTTGTCGAATCCTCCATTGTTGTTG
JMCP003A04+ TTGTTCTCCATGAATCCATTGTTGTTGTTGTTGTTGTTGTCGAATCCTCCATTGTTGTTG
JMFS100F01+ TTGTTCTCCATGAATCCATTGTTGTTGTTGTTGTTGTTGTCGAATCCTCCATTGTTGTTG
rJMSF023A06- TTGTTCNCCATGAATCCATTGTTGTTGTTGTTGTTGTTGNCNAATCCNCCATTGTTGTTG
JMCP007H09+ TTGTTCTCCATGAATCCATTGTTGTTGTTGTTGTTGTTGTCGAATCCTCCATTGTTGTTG
JMCP009B09+ TTGTTCTCCATGAACCCATTGTTGTTGTTGTTGTTGTTGTCGAATCCCCCATCGTTGTTG
JMCP018G11+ TTGTTCTCCATGAATCCATTGTTGTTGTTGTTGTTGTTGTCGAATCCTCCATCGTTGTTG
JMFF003B22+ TTGTTCTCCATGAATCCATTGTTGTTGTTGTTGTTGTTGTCGAATCCTCCATTGTTGTTG
JMCP004E10+ TTGTTCTCCATGAATCCATTGTTGTTGTTGTTGTTGTTGagcAATCCTCCATTGTTGTTG
rJMCP007F07+ TTGTTCTCCATGAATCCATTGTTGTTGTTGTTGTTGTTGTCGAATCCTCCATTGTTGTTG
rJMFF049F20- TTGTTCTCCATGAATCCATTGTTGTTGTTGTTGTTGTTGTCGAATCCTCCATTGTTGTTG
rJMFF025H01- TTGTTCNCCATGAATCCATTGTTGTTGTTGTTGTTGTTGNCAAANCCNCCATTGTTGTTG
rJMCP008D07+ TTGTTCTCCATGAATCCATTGTTGTTGTTGTTGTTGTTGTCGAATCCTCCATTGTTGTTG
rJMCP009B02+ TTGTTCTCCATGAATCCATTGTTGTTGTTGTTGTTGTTGTCGAATCCTCCACTGTTGTTG
JMCP010D06+ TTGTTCTCCATGAATCCATTGTTGTTGTTGTTGTTGTTGTCGAATCCTCCATTGTTGTTG
JMCP010D07+ TTGTTCTCCATGAATCCATTGTTGTTGTTGTTGTTGTTGTCGAATCCTCCATTGTTGTTG
JMCP005C08+ TTGTTCTCCATGAATCCATTGTTGTTGTTGTTGTTGTTGTCGAATCCTCCATTGTTGTTG
JMCP020E10+ TTGTTCTCCATGAATCCATTGTTGTTGTTGTTGTTGTTGTCGAATCCTCCATTGTTGTTG
rJMCP007E08+ TTGTTCTCCATGAATCCATTGTTGTTGTTGTTGTTGTTGTCGAATCCTCCATTGTTGTTG
JMCP002C02+ TTGTTCTCCATGAATCCATTGTTGTTGTTGTTGTTGTTGTCGAATCCTCCATTGTTGTTG
rJMSF046F10- TNGTTCNCCANGAANCCATTGTNGTTGTTGTTGTTGTTGCCNAANCCNCCATNGTTGTTG
rJMCP004G02+ TTGTTCTCCATGAATCCATTGTTGTTGTTGTTGTTGTTGTCGAATCCTCCATTGTTGTTG
____________________________________________________________
consensus TTGTTCTCCATGAATCCATTGTTGTTGTTGTTGTTGTTGTCGAATCCTCCATTGTTGTTG
. : . : . : . : . : . :
rJMSF046E16- AACNGGTTTCTTGAATTCNCGNANGGANGTCNGGNGTACTTCNCNGGGTNGACATCATAG
JMCP003H05+ AACTGGTTTCTTGAATTCTCGTATGGATGTCTGGCGTACTTCTCTGTGTTGACATCATAG
JMCP003A04+ AACTGGTTTCTTGAATTCTCGTATGGATGTCTGGCGTACTTCTCTGTGTTGACATCATAG
JMFS100F01+ AACTGGTTTCTTGAATTCTCGTATGGATGTCTGGCGTACTTCTCTGTGTTGACATCATAG
rJMSF023A06- AACTGGTTTCTTGAATTCNCGNATGGATGTCNGGCGTACTTCTCTGNGTTGACATCATAG
JMCP007H09+ AACTGGTTTCTTGAATTCTCGTATGGATGagTGGCGTACTTCTCTGTGTTGACATCATAG
JMCP009B09+ AACTGGTTTCTTGAATTCTCGTATGGATGTCTGGCGTACTTCTCTGTGTTGACATCATAG
JMCP018G11+ AACTGGTTTCTTGAATTCTCGTATGGATGTCTGGCGTACTTCTCTGTGTTGACATCATAG
JMFF003B22+ AACTGGTTTCTTGAATTCTCGTATGGATGTCTGGCGTACTTCTCTGTGTTGACATCATAG
JMCP004E10+ AACTGGTTTCTTGAATagTCGTATGGATGTCTGGCGTACTTCTCTGTGTTGACATCATAG
rJMCP007F07+ AACTGGTTTCTTGAATTCTCGTATGGATGTCTGGCGTACTTCTCTGTGTTGACATCATAG
rJMFF049F20- AACTGGTTTCTTGAATTCTCGTATGGATGTCTGGCGTACTTCTCTGTGTTGACATCATAG
rJMFF025H01- AACTGGTTTCTTGAATTCNCGNATGGATGTCTGGNGNACTTCTCTGGGTTGACATCANAN
rJMCP008D07+ AACTGGTTTCTTGAATTCTCGTATGGATGTCTGGCGTACTTCTCTGTGTTGACATCATAG
rJMCP009B02+ AACTGGTTTCTTGAATTCTCGTATGGATGTCTGGCGTACTTCTCTGTGTTGACATCATAG
JMCP010D06+ AACTGGTTTCTTGAATTCTCGTATGGATGTCTGGCGTACTTCTCTGTGTTGACATCATAG
JMCP010D07+ AACTGGTTTCTTGAtaagaacataGGATcagaccgcatgaagagacacaactgtagtata
JMCP005C08+ AACTGGTTTCTTGAATTCTCGTATGGATGTCTGGCGTACTTCTCTGTGTTGACATCATAG
JMCP020E10+ AACTGGTTTCTTGAATTCTCGTATGGATGTCTGGCGTACTTCTCTGTGTTGACATCATAG
rJMCP007E08+ AACTGGTTTCTTGAATTCTCGTATGGATGTCTGGCGTACTTCTCTGTGTTGACATCATAG
JMCP002C02+ AACTGGTTTCTTGAATTCTCGTACGGATGTCTGGCGTACTTCTCTGTGTTGACATCATAG
rJMSF046F10- AACNGGTTTCTTGAATTCNCGNANGGANGTCNGGCGNACTTCNCNGNGTTGACATCANAG
rJMCP004G02+ AACTGGTTTCTTGAATTCTCGTATGGATGTCTGGCGTACTTCTCTGTGTTGACATCATAG
____________________________________________________________
consensus AACTGGTTTCTTGAATTCTCGTATGGATGTCTGGCGTACTTCTCTGTGTTGACATCATAG
. : . : . : . : . : . :
rJMSF046E16- TAANACCNCCCAT-TTTCCANGAATCTNGGGTCGCTCATCCCTNGCNGCTCAAACCNGTT
JMCP003H05+ TAATACCTCCCAT-TTTCCATGAATCTTGTGTCGCTCATCCCTTGCTGCTCAAACCTGTT
JMCP003A04+ TAATACCTCCCAT-TTTCCATGAATCTTGTGTCGCTCATCCCTTGCTGCTCAAACCTGTT
JMFS100F01+ TAATACCTCCCAT-TTTCCATGAATCTTGTGTCGCTCATCCCTTGCTGCTCAAACCTGTT
rJMSF023A06- TAATACCTCCCAT-TTTCCATGAATCTNGNGTCGCTCATCCCTTGCTGCTCAAACCTGTT
JMCP007H09+ TAATACCTCCCAT-TTTCCATGAATCTTGTGTCGCTCATCCCTTGCTGCTCAAACCTGTT
JMCP009B09+ TAATACCTCCCAa-aaTCCATGAATCTTGTGTCGCTCATCCCTTGCTGCTCAAACCTGTT
JMCP018G11+ TAATACCTCCCAT-TTTCCATGAATCTTGTGTCGCTCATCCCTTGCTGCTCAAACCTGTT
JMFF003B22+ TAATACCTCCCAT-TTTCCATGAATCTTGTGTCGCTCATCCCTTGCTGCTCAAACCTGTT
JMCP004E10+ TAATACCTCCCAT-TTTCCATGAATCTTGTGTCGCTCATCCCTTGCTGCTCAAACCTGTT
rJMCP007F07+ TAATACCTCCCAT-TTTCCATGAATCTTGTGTCGCTCATCCCTTGCTGCTCAAACCTGTT
rJMFF049F20- TAATACCTCCCAT-TTTCCATGAATCTTGTGTCGCTCATCCCTTGCTGCTCAAACCTGTT
rJMFF025H01- AAANACCNCCCAT-TTTCCATGAATCTTGNGTCNCTCATCCCTTGCTGCTCAAACCTGTT
rJMCP008D07+ TAATACCTCCCAT-TTTCCATGAATCTTGTGTCGCTCATCCCTTGCTGCTCAAACCTGTT
rJMCP009B02+ TAATACCTCCCAT-TTTCCATGAATCTTGTGTCGCTCATCCCTTGCTGCTCAAACCTGTT
JMCP010D06+ TAATACCTCCCAT-TTTCCATGAATCTTGTGTCGCTCATCCCTTGCTGCTCAAACCTGTT
JMCP010D07+ actatatggaggataaaggtacttagaacacagcaagtagggaacgacgTCAAACCTGTT
JMCP005C08+ TAATACCTCCCAT-TTTCCATGAATCTTGTGTCGCTCATCCCTTGCTGCTCAAACCTGTT
JMCP020E10+ TAATACCTCCCAT-TTTCCATGAATCTTGTGTCGCTCATCCCTTGCTGCTCAAACCTGTT
rJMCP007E08+ TAATACCTCCCAT-TTTCCATGAATCTTGTGTCGCTCATCCCTTGCTGCTCAAACCTGTT
JMCP002C02+ TAATACCTCCCAT-TTTCCATGAATCTTGTGTCGCTCATCCgaaGCTGCTCAAACCTGTT
rJMSF046F10- TAATNCCNCCCAT-TTTCCANGAATCTNGGGNCGCTCANCCCTNGCNGCTCAAACCNGTT
rJMCP004G02+ TAATACCTCCCAT-TTTCCATGAATCTTGTGTCGCTCATCCCTTGCTGCTCAAACCTGTT
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consensus TAATACCTCCCAT-TTTCCATGAATCTTGTGTCGCTCATCCCTTGCTGCTCAAACCTGTT
. : . : . : . : . : . :
rJMSF046E16- TGCAGCGCCNCCGTTGTTGTAGTTGTAGCGGTTGCCG
JMCP003H05+ TGCAGCGCCGCCGTTGTTGTAGTTGTAGCGGTTGCCGCCGCCGCCGCCGGTGGTGGTGGT
JMCP003A04+ TGCAGCGCCGCCGTTGTTGTAGTTGTAGCGGTTG---CCGCCGCCGCCGGTGGTGGTGGT
JMFS100F01+ TGCAGCGCCGCCGTTGTTGTAGTTGTAGCGGTTGCCGCCG
rJMSF023A06- TGCAGCGCCGCCGTTGTTGTAGTTGTAGCGGTTGCCGCC
JMCP007H09+ TGgtcCGCCGCCGTTGTTGTAGTTGTAGCGGTTGCCGCCGCCGCCGCCGGTGGTGGTGGT
JMCP009B09+ TGCAGCGCCGCCGTTGTTGTAGTTGTAGCGGTTGCCGCCGCCGCCGCCGGTGGTGGTGGT
JMCP018G11+ TGCAGCGCCGCCGTTGTTGTAGTTGTAGCGGTTGCCGCCGCCGCCGCCGGTGGTGGTGGT
JMFF003B22+ TGCAGCGCCGCCGTTGTTGTAGTTGTAGCGGTTGCCGCC
JMCP004E10+ TGCAGCGCCGCCGTTGTTGTAGTTGTAGCGGTTGCCGCCGCCGCCGCCGGTGGTGGTGGT
rJMCP007F07+ TGCAGCGCCGCCGTTGTTGTAGTTGTAGCGGTTGCCGCCGCCGCCGCCGGTGGTGGTGGT
rJMFF049F20- TGCAGCGCCGCCGTTGTTGT
rJMFF025H01- TGCANCNCCNCCGTTGTTGTANTTGTANCGGTTGCC
rJMCP008D07+ TGCAGCGCCGCCGTTGTTGTAGTTGTAGCGGTTG---CCGCCGCCGCCGGTGGTGGTGGT
rJMCP009B02+ TGCAGCGCCGCCGTTGTTGTAGTTGTAGCGGTTGCCGCCGCCGCCGCCGGTGGTGGTGGT
JMCP010D06+ TGCAGCGCCGCCGTTGTTGTAGTTGTAGCGGTTGCCGCCGCCGCCGCCGGTGGTGGTGGT
JMCP010D07+ TGCAGCGCCGCCGTTGTTGTAGTTGTAGCGGTTGCCGCCGCCGCCGCCGGTGGTGGTGGT
JMCP005C08+ TGCAGCGCCGCCGTTGTTGTAGTTGTAGCGGTTGCCGCCGCCGCCGCCGGTGGTGGTGGT
JMCP020E10+ TGCAGCGCCGCCGTTGTTGTAGTTGTAGCGGTTGCCGCCGCCGCCGCCGGTGGTGGTGGT
rJMCP007E08+ TGCAGCGCCGCCGTTGTTGTAGTTGTAGCGGTTGCCGCCGCCGCCGCCGGTGGTGGTGGT
JMCP002C02+ TGCAGCGCCGCCGTTGTTGTAGTTGTAGCGGTTGCCGCCGCCGCCGCCGGTGGTGGTGGT
rJMSF046F10- TGCANCGCCNCCGTTGTTGTATTTGNANCGGTTGCCNCCNCCNCCNCCGGNGGNGGNGGN
rJMCP004G02+ TGCAGCGCCGCCGTTGTTGTAGTTGTAGCGGTTGCCGCCGCCGCCGCCGGTGGTGGTGGT
____________________________________________________________
consensus TGCAGCGCCGCCGTTGTTGTAGTTGTAGCGGTTGCCGCCGCCGCCGCCGGTGGTGGTGGT
. : . : . : . : . : . :
JMCP003H05+ GGGGAAGGTTTCTTCTCGGTTGTTGGTGTAGTAGTAGTTGTTGTTGTTGTCAGTGTTGAA
JMCP003A04+ GGGGAAGGTTTCTTCTCGGTTGTTGGTGTAGTAGTAGTTGTTGTTGTTGTCAGTGTTGAA
JMCP007H09+ GGGGAAGGTTTCTTCTCGGTTGTTGGTGTAGTAGTAGTTGTTGTTGTTGTCAGTGTTGAA
JMCP009B09+ GGGGAAGGTTTCTTCTCGGTTGTTGGTGTAGTAGTAGTTGTTGTTGTTGTCAGTGTTGAA
JMCP018G11+ GGGGAAGGTTTCTTCTCGGTTGTTGGTGTAGTAGTAGTTGTTGTTGTTGTCAGTGTTGAA
JMCP004E10+ GGGGAAGGTTTCTTCTCGGTTGTTG
rJMCP007F07+ GGGGAAGGTTTCTTCTCGGTTGTTGGTGTAGTAGTAGTTGTTGTTGTTGTCAGTGTTGAA
rJMCP008D07+ GGGGAAGGTTTCTTCTCGGTTGTTGGTGTAGTAGTAGTTGTTGTTGTTGTCAGTGTTGAA
rJMCP009B02+ GGGGAAGGTTCCTTCTCGGTTGTTGGTGTAGTAGTAGTTGTTGTTGTTGTCAGTGTTGAA
JMCP010D06+ GGGGAAGGTTTCTTCTCGGTTGTTGGTGTAGTAGTAGTTGTTGTTGTTGTCAGTGTTGAA
JMCP010D07+ GGGGAAGGTTTCTTCTCGGTTGTTGGTGTAGTAGTAGTTGTTGTTGTTGTCAGTGTTGAA
JMCP005C08+ GGGGAAGGTTTCTTCTCGGTTGTTGGTGTAGTAGTAGTTGTTGTTGTTGTCAGTGTTGAA
JMCP020E10+ GGGGAAGGTTTCTTCTCGGTTGTTGGTGTAGTAGTAGTTGTTGTTGTTGTCAGTGTTGAA
rJMCP007E08+ GGGGAAGGTTTCTTCTCGGTTGTTGGTGTAGTAGTAGTTGTTGTTGTTGTCAGTGTTGAA
JMCP002C02+ GGGGAAGGTTTCTTCTCGGTTGTTGGTGTAGTAGTAGTTGTTGTTGTTGTCAGTGTTGAA
rJMSF046F10- GGGGAAGGTTNCTTCNCGGTTGTTGGTGAAGAANTANTTGTTGTTGT
rJMCP004G02+ GGGGAAGGTTTCTTCTCGGTTGTTGGTGTAGTAGTAGTTGTTGTTGTTGTCAGTGTTGAA
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consensus GGGGAAGGTTTCTTCTCGGTTGTTGGTGTAGTAGTAGTTGTTGTTGTTGTCAGTGTTGAA