Contig 001534:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP002C02Sequence471001534 (24)ref|XP_009618543.1|9e-08PREDICTED: probable serine/threonine-protein kinase clkA [Nicotiana tomentosifo
JMCP003A04Sequence622001534 (24)ref|XP_009769426.1|4e-08PREDICTED: homeobox protein 2-like [Nicotiana sylvestris]
JMCP003H05Sequence615001534 (24)ref|XP_009618543.1|2e-08PREDICTED: probable serine/threonine-protein kinase clkA [Nicotiana tomentosifo
JMCP004E10Sequence547001534 (24)ref|XP_009618543.1|1e-07PREDICTED: probable serine/threonine-protein kinase clkA [Nicotiana tomentosifo
JMCP004G02Sequence585001534 (24)ref|XP_009618543.1|2e-07PREDICTED: probable serine/threonine-protein kinase clkA [Nicotiana tomentosifo
JMCP005C08Sequence502001534 (24)ref|XP_009618543.1|1e-07PREDICTED: probable serine/threonine-protein kinase clkA [Nicotiana tomentosifo
JMCP007E08Sequence517001534 (24)ref|XP_009618543.1|1e-07PREDICTED: probable serine/threonine-protein kinase clkA [Nicotiana tomentosifo
JMCP007F07Sequence468001534 (24)ref|XP_009618543.1|9e-08PREDICTED: probable serine/threonine-protein kinase clkA [Nicotiana tomentosifo
JMCP007H09Sequence581001534 (24)ref|XP_009618543.1|1e-07PREDICTED: probable serine/threonine-protein kinase clkA [Nicotiana tomentosifo
JMCP008D07Sequence612001534 (24)ref|XP_009769426.1|4e-08PREDICTED: homeobox protein 2-like [Nicotiana sylvestris]
JMCP009B02Sequence509001534 (24)ref|XP_009769426.1|2e-08PREDICTED: homeobox protein 2-like [Nicotiana sylvestris]
JMCP009B09Sequence581001534 (24)ref|XP_009618543.1|5e-08PREDICTED: probable serine/threonine-protein kinase clkA [Nicotiana tomentosifo
JMCP010D06Sequence570001534 (24)ref|XP_009618543.1|1e-07PREDICTED: probable serine/threonine-protein kinase clkA [Nicotiana tomentosifo
JMCP010D07Sequence579001534 (24)
JMCP018G11Sequence588001534 (24)ref|XP_009618543.1|2e-07PREDICTED: probable serine/threonine-protein kinase clkA [Nicotiana tomentosifo
JMCP020E10Sequence414001534 (24)ref|XP_009618543.1|7e-08PREDICTED: probable serine/threonine-protein kinase clkA [Nicotiana tomentosifo
JMFF003B22Sequence520001534 (24)ref|XP_009618543.1|6e-08PREDICTED: probable serine/threonine-protein kinase clkA [Nicotiana tomentosifo626014801dbj|BAM28759.1|4e-07ROX1 homologue [Nicotiana tabacum]
JMFF025H01Sequence479004645 (11)ref|XP_011086042.1|90.5PREDICTED: LOW QUALITY PROTEIN: protein E6-like [Sesamum indicum]541001534 (24)
JMFF045B10Sequence619004645 (11)ref|XP_011086042.1|90.5PREDICTED: LOW QUALITY PROTEIN: protein E6-like [Sesamum indicum]284001534 (24)
JMFF049F20Sequence627004645 (11)ref|XP_011086042.1|90.9PREDICTED: LOW QUALITY PROTEIN: protein E6-like [Sesamum indicum]533001534 (24)ref|XP_009769426.1|6e-09PREDICTED: homeobox protein 2-like [Nicotiana sylvestris]
JMFS100F01Sequence612001534 (24)ref|XP_009618543.1|2e-07PREDICTED: probable serine/threonine-protein kinase clkA [Nicotiana tomentosifo
JMSF023A06Sequence486004645 (11)ref|XP_011086042.1|90.5PREDICTED: LOW QUALITY PROTEIN: protein E6-like [Sesamum indicum]669001534 (24)ref|XP_009618543.1|3e-04PREDICTED: probable serine/threonine-protein kinase clkA [Nicotiana tomentosifo
JMSF046E16Sequence767004645 (11)ref|XP_009758887.1|2e-18PREDICTED: probable serine/threonine-protein kinase clkA, partial [Nicotiana sy543001534 (24)
JMSF046F10Sequence720004645 (11)ref|XP_009758887.1|2e-18PREDICTED: probable serine/threonine-protein kinase clkA, partial [Nicotiana sy620001534 (24)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF046E16- CNTCTGTCGAGTTTAATATNTAGATTTG
JMCP003H05+ AGTTTAATATATAGATTTc
JMCP003A04+ ATATATAGATTTG
rJMFF025H01- TATATAGATTTG
rJMCP008D07+ AGTTTAATATATAGATTTG
                      ____________________________________________________________
consensus CNTCTGTCGAGTTTAATATATAGATTTG
 
. : . : . : . : . : . :
rJMSF046E16- GTCNAGACCAGATTGACACAAAACCATAGTTTCATGGTCTCATTCACACACAATATAACT
JMCP003H05+ cagatcACCAG-TTGtgtgttAACCATAGTTTCATccagagtTagtgtgtgttTATAACT
JMCP003A04+ GagTAGACCAG-TTGACACAAAACCATAGTTTCATGGTCTCATTCACAgtgAATATAACT
JMFS100F01+ CT
JMCP007H09+ CACAAAACCATAGTTTCATccagagtTTCACAgtgAATATAACT
JMCP009B09+ ACACAAAACCATAGTTTCATccagagtTTCACAgtgAATATAACT
rJMFF045B10- GACACAAAACCATAGTTTCATGGGCTCCTTCCCCCCCCATATAACT
JMCP018G11+ TTGACACAAAACCATAGTTTCATGGagaCATTCACAgtgAATATAACT
JMCP004E10+ GACACAAAACCATAGTTTCATGGagaCATTCACACACAATATAACT
rJMFF049F20- TCTCATTCACACACAATATAACT
rJMFF025H01- GTCTAGACCAG-TTGACACAAAACCATAGTTTCATGGTCTCATTCACACACAATATAACT
rJMCP008D07+ cagatcACCAG-TTGACACAAAACCATAGTTTCATccagagtTTCAgtgtgAATATAACT
JMCP010D06+ GTTTgtTcGaaagtTagtgtgggttaATAtCa
JMCP010D07+ AAACCtTtGTTTCATcGaaagtTTgtgtgtgttTATAACT
rJMSF046F10- TCTCATTCACACACAATATAACT
rJMCP004G02+ GACACAAAACCATAGTTTCATGGTCTCATTCACACACAATATAACT
                      ____________________________________________________________
consensus GTCTAGACCAG-TTGACACAAAACCATAGTTTCATGGTCTCATTCACACACAATATAACT
 
. : . : . : . : . : . :
rJMSF046E16- ATAGAGACAGGAGATAATTAATAACCTATGAACAAATCTATAGCTTAATCATCATCAACA
JMCP003H05+ AatctcAgAGGAGATAATTAATAACCTATGAACAAAagaAaAGCTTAATCATCATCAACA
JMCP003A04+ ATAGAGACAGGAGATAATTAATAACCTATGAACAAATCTATAGCTTAATCATCATCAACA
JMFS100F01+ ATAGAGACAGGAGATAATTAATAACCTATGAACAAATCTATAGCTTAATCATCATCAACA
rJMSF023A06- TAGAGACAGGAGATAATTAATAACCTATGAACAAATCTATAGCTTAATCATCATCAACA
JMCP007H09+ ATAGAGACAGGAGATAATTAATAACCTATGAACAAAagaATAcgTTAATCATCATCAACA
JMCP009B09+ ATAGAGACAGGAGATAATTAATAACCTATGAACAAAagaATAGCTTAATCATCATCAACA
rJMFF045B10- ATAGAGACCGGGGATAATTAATAACCTATGAACAAATCTATAGCTTAATCCTCATCAACA
JMCP018G11+ ATAGAGACAGGAGATAATTAATAACCTATGAACAAAagaATAGCTTAATCATCATCAACA
JMCP004E10+ ATAGAGACAGGAGATAATTAATAACCTATGAACAAATCTATAGCTTAATCATCATCAACA
rJMFF049F20- ATAGAGACAGGAGATAATTAATAACCTATGAACAAATCTATAGCTTAATCATCATCAACA
rJMFF025H01- ATAGAGACAGGAGATAATTAATAACCTATGAACAAATCTATAGCTTAATCATCATCAACA
rJMCP008D07+ ATAGAGACAGGAGATAATTAATAACCTATGAACAAAagaATAGCTTAATCAaCATCAACA
rJMCP009B02+ GAACAttagataAcgaattagtagtaCAACA
JMCP010D06+ tatctcAgtcctcATAATTAAattCCataGAtgAttaaaAaAcgaattagtagtTCAACA
JMCP010D07+ ATAGAGAgtcGAGATAATTAATAACCTATGAACAttagaATAcgTTAAagtagtTCAACA
JMCP005C08+ TAGCTTAATCATCATCAACA
rJMCP007E08+ AATAACCTATGAACAAAagaATAGCTTAATCATCATCAACA
rJMSF046F10- ATAGAGACAGGAGATAATTAATAACCTATGAACAAATCTATAGCTTAATCATCATCAACA
rJMCP004G02+ ATAGAGACAGGAGATAATTAATAACCTATGAACAAATCTATAGCTTAATCATCATCAACA
                      ____________________________________________________________
consensus ATAGAGACAGGAGATAATTAATAACCTATGAACAAATCTATAGCTTAATCATCATCAACA
 
. : . : . : . : . : . :
rJMSF046E16- TATTCACCCCTAAACAACCATAATTTAACACACAATCAAACACCCAGTCGTGTGTTTAAT
JMCP003H05+ aATTCACCCCTAAACAACCATAATTTAACAgtgAATCAAACACCgtcagcTGTGTTTAAT
JMCP003A04+ TATTCACCCCTAAACAACCATAATTTAACACACAATCAAACACCCAGTCGTGTGTTTAAT
JMFS100F01+ TATTCACCCCTAAACAACCATAATTTAACACACAATCAAACACCCAGTCGTGTGTTTAAT
rJMSF023A06- TATTCACCCCTAAACAACCATAATTTAACACACAATCAAACACCCAGTCGTGTGTTTAAT
JMCP007H09+ TATTCACCCCTAAACAACCATAATTTAACACACAATCAAACACCCAGTgcTGTGTTTAAT
JMCP009B09+ TATTCACCCCTAAACAACCATAATTTAACACACAATCAAACACCCAGTCcTGTGTTTAAT
rJMFF045B10- TATTCCCCCCTAAACAACCATAATTTAACCCCCAATCAAACCCCCCGGCGGGGGGTTAAT
JMCP018G11+ TATTCACCCCTAAACAACCATAATTTAACACACAATCAAACACCCAGagcTGTcCTTAAT
JMCP004E10+ TATTCACCCCTAAACAACCATAATTTAACACACAATCAAACACCCAGTCGTGTGTTTAAT
rJMCP007F07+ CTAAACAACCATAATTTAACACACAATCAAACACCCAGTCGTGTGTTTAAT
rJMFF049F20- TATTCACCCCTAAACAACCATAATTTAACACACAATCAAACACCCAGTCGTGTGTTTAAT
rJMFF025H01- TATTCACCCCTAAACAACCATAATTTAACACACAATCAAACACCCAGTCGTGTGTTTAAT
rJMCP008D07+ TATTCACCCCTAAACAACCATAATTTAACAgtgAATCAAACACCgtcagcTGTGTTTAAT
rJMCP009B02+ ataagtCCCCTAAACAACCATAATTTttgtgtgAAagtAAgtgCgtcagcTGTGTTTAAT
JMCP010D06+ ataTgtgCCCTAAtgtACCtaAATTTAAgtgtgAATCAAAgtgCgtcagcacacTTTAAT
JMCP010D07+ TATTCACCCCTAAACAACCATAATTTAACAgtgAATCAAACtgCgtcagcTGTGTTTAAT
JMCP005C08+ TATTCACCCCTAAACAACCATAATTTAACACACAATCAAACACCCAGTCGTGTGTTTAAT
rJMCP007E08+ TATTCACCCCTAAACAACCATAATTTAACACACAATCAAACACCCGGTCGTGTGTTTAAT
JMCP002C02+ CCCCTAAACAACCATAATTTAACAgtgAATCAAACACCgtcTCGTGTGTTTAAT
rJMSF046F10- TATTCACCCCTAAACAACCATAATTTAACACACAATCAAACACCCAGTCGTGTGTTTAAT
rJMCP004G02+ TATTCACCCCTAAACAACCATAATTTAACACACAATCAAACACCCAGTCGTGTGTTTAAT
                      ____________________________________________________________
consensus TATTCACCCCTAAACAACCATAATTTAACACACAATCAAACACCCAGTCGTGTGTTTAAT
 
. : . : . : . : . : . :
rJMSF046E16- TTGCAGATTTTGGGACTCCGTCACATGATCATCTTTTAACTTTGTAG-AAAAAAAAAAAA
JMCP003H05+ TTGCAGATTTTGGGtgaggGTCAgATGATCAagaTTTAACTTTGTAG-AAAAAAAA-AAA
JMCP003A04+ TTGCAGATTTTGGGACTCCGTCACATGATCATCTTTTAACTTTGTAG-AAAAAA---AAA
JMFS100F01+ TTGCAGATTTTGGGACTCCGTCACATGATCATCTTTTAACTTTGTAG-AAAAAAAA-AAA
rJMSF023A06- TTGCAGATTTTGGGACTCCGTCACATGATCATCTTTTAACTTTGTAG-AAAAAAAA-AAA
JMCP007H09+ TTGCAGATTTTGGGtgaggGTCACATGATCAagaTTTAACTTTGTAG-AAAAAAAA-AAA
JMCP009B09+ TTGCAGATTTTGGGtgaCCGTCACATGATCAagaTTTAACTTTGTAG-AAAAAAA--AAA
rJMFF045B10- TTGCAAATTTTGGGACTCCGCCACATGAACATCTTTTAACTTTGGA--AAAAAAAAAAAA
JMCP018G11+ TTGCAGATTTTGGGtgaCCGTCACATGATCAagaTTTAACTTTGTAG-AAAAAAAA-AAA
JMFF003B22+ ACATGATCATNTTTTAACTTTGTAG-AAAAAAA--AAA
JMCP004E10+ TTGCAGATTTTGGGtgaCCGTCACATGATCAagaTTTAACTTTGTAG-AAAAAAA--AAA
rJMCP007F07+ TTGCAGATTTTGGGACTCCGTCACATGATCATCTTTTAACTTTGTAG-AAAAAAGA-AAA
rJMFF049F20- TTGCAGATTTTGGGACTCCGTCACATGATCATCTTTTAACTTTGTAGAAAAAAAAAAAAA
rJMFF025H01- TTGCAGATTTTGGGACTCCGTCACATGATCATCTTTTAACTTTGTAG-AAAAAAAAAAAA
rJMCP008D07+ TTGCAGATTTTGGGtgaCCGTCAgtaGATCAagaTTTAACTTTGTAG-AAAAAAAA-AAA
rJMCP009B02+ TTGCAGATTTTGcctgaggGagtgtaGAagtaaaaaTAtCTTTGTAG-AAAAAAAAAAAA
JMCP010D06+ TTGCtcATTTTGGGtgaggGTgtgtactagtaaaaaTAACTTaGTtc-AAAAAAAAAAAA
JMCP010D07+ TTGCAGATTTTGGGtgaCgGTgtgtactTgtagaaaTAACTTaGTAG-AAAAAAAAAAAA
JMCP005C08+ TTGCAGATTTTGGGtgaCCGTCACATGATCAagaTTTAACTTTGTAG-AAAAAAA--AAA
JMCP020E10+ TGCAGATTaaGcctgaggGTCACATGATCATCaaaTAACaaacaAG-AAAAAA---AAA
rJMCP007E08+ TTGCAGATTTTGGGACaCCGTCACATGATCAagaTTTAACTTTGTAG-AAAAAAA--AAA
JMCP002C02+ TTGCAGATTTTGGGtgaCCGTgtgtaGATCAagaTTTAACTTTGTAG-AAAAAAA--AAA
rJMSF046F10- TTGCAGATTTTGGGACTCCGTCACATGATCATCTTTTAACTTTGTAG-AAAAAAAAAAAA
rJMCP004G02+ TTGCAGATTTTGGGACTCCGTCACATGATCATCTTTTAACTTTGTAG-AAAAAAAAGAAA
                      ____________________________________________________________
consensus TTGCAGATTTTGGGACTCCGTCACATGATCATCTTTTAACTTTGTAG-AAAAAAAA-AAA
 
. : . : . : . : . : . :
rJMSF046E16- ATTGTTAAGGAATCNCAGGGAAGGNCTTCTNGGNCCNGGAACNCCNCCATATTCGGGNAG
JMCP003H05+ ATTGTTAAGGAATCTCAGGGAAGGTCTTCTTGGTCCTGGAACTCCTCCATATTCTGGTAG
JMCP003A04+ ATTGTTAAGGAATCTCAGGGAAGGTCTTCTTGGTCCTGGAACTCCTCCATATTCTGGTAG
JMFS100F01+ ATTGTTAAGGAATCTCAGGGAAGGTCTTCTTGGTCCTGGAACTCCTCCATATTCTGGTAG
rJMSF023A06- ATTGTTAAGGAATCTCAGGGAAGGTCTTCTTGGTCCNGGAACTCCNCCATATTCNGGTAG
JMCP007H09+ ATTGTTAAGGAATCTCAGGcttccagTTCTTGGTCCTGGAAgaCCTCCATATTCTGGTAG
JMCP009B09+ ATTGTTAAGGAATCTCAGGGAAGGTCTTCTTGGTCCTGGAACTCCTCCATATCCTGGTAG
rJMFF045B10- ATTGTTAAGGAATCTCAGGGAAGGGCTTCTTGGGCCTGGAACTCCCCCATATTCTGG
JMCP018G11+ ATTGTTAAGGAATCTCAGGGAAGGTCTTCTTGGTCCTGGAACTCCTCCATATTCTGGTAG
JMFF003B22+ ATTGTTAAGGAATCTCAGGGAAGGTCTTCTTGGTCCTGGAACTCCTCCATATTCTGGTAG
JMCP004E10+ ATTGTTAAGGAATCTCAGGGAAGGTCTTgaTGGTCCTGGAACTCCTCCATATagaGGTAG
rJMCP007F07+ ATTGTTAAGGAATCTCAGGGAAGGTCTTCTTGGTCCTGGAGCTCCTCCATATTCTGGTAG
rJMFF049F20- ATTGTTAAGGAATCTCAGGGAAGGTCTTCTTGGTCCTGGAACTCCTCCATATTCTGGTAG
rJMFF025H01- ATTGTTAAGGAATCTCAGGGAAGGTCTTCTTGGNCCNGGAACTCCTCCANATTCNGGNAG
rJMCP008D07+ ATTGTTAAGGAATCTCAGGGAAGGTCTTCTTGGTCCTGGAACTCCTCCATATTCTGGTAG
rJMCP009B02+ GTTGTTAAGGAATCTCAGGGAAGGTCTTCTTTGTCCTGGAACTCCTCCGTATTCTGGTAG
JMCP010D06+ ATTGTTAAGGAATCTCAGGGAAGGTCTTCTTGGTCCTGGAACTCCTCCATATTCTGGTAG
JMCP010D07+ ATTGTTAAGGAATCTCAGGGAAGGTCTTCTTGGTCCTGGAACTCCTCCATATTCTGGTAG
JMCP005C08+ ATTGTTAAGGAATCTCAGGGAAGGTCTTCTTGGTCCTGGAACTCCTCCATATTCTGGTAG
JMCP020E10+ ATTGTTAAGGAATCTCAGGGAAGGTCTTCTTGGTCCTGGAACTCCTCCATATTCTGGTAG
rJMCP007E08+ ATTGTTAAGGAATCTCAGGGAAGGTCTTCTTGGTCCTGGAACTCCTCCATATTCTGGTAG
JMCP002C02+ ATTGTTAAGGAATCaCAGGGAAGGTCTagaTGGTCCTGGAACTCCTCCATATagaGGTAG
rJMSF046F10- ATTGTTAAGGAATCNCAGGGAAGGNCTTCTNGGNCCNGGAACNCCNCCATATTCNGGTAG
rJMCP004G02+ ATTGTTAAGGAATCTCAGGGAAGGTCTTCTTGGTCCTGGGACTCCTCCATATTCTGGTAG
                      ____________________________________________________________
consensus ATTGTTAAGGAATCTCAGGGAAGGTCTTCTTGGTCCTGGAACTCCTCCATATTCTGGTAG
 
. : . : . : . : . : . :
rJMSF046E16- TNGTTCNCCANGAANCCATNGTNGTTGTTGTTGTTGTTGCCAAANCCNCCATNGTTGTTG
JMCP003H05+ TTGTTCTCCATGAATCCATCGTTGTTGTTGTTGTTGTTGTCGAATCCTCCATTGTTGTTG
JMCP003A04+ TTGTTCTCCATGAATCCATTGTTGTTGTTGTTGTTGTTGTCGAATCCTCCATTGTTGTTG
JMFS100F01+ TTGTTCTCCATGAATCCATTGTTGTTGTTGTTGTTGTTGTCGAATCCTCCATTGTTGTTG
rJMSF023A06- TTGTTCNCCATGAATCCATTGTTGTTGTTGTTGTTGTTGNCNAATCCNCCATTGTTGTTG
JMCP007H09+ TTGTTCTCCATGAATCCATTGTTGTTGTTGTTGTTGTTGTCGAATCCTCCATTGTTGTTG
JMCP009B09+ TTGTTCTCCATGAACCCATTGTTGTTGTTGTTGTTGTTGTCGAATCCCCCATCGTTGTTG
JMCP018G11+ TTGTTCTCCATGAATCCATTGTTGTTGTTGTTGTTGTTGTCGAATCCTCCATCGTTGTTG
JMFF003B22+ TTGTTCTCCATGAATCCATTGTTGTTGTTGTTGTTGTTGTCGAATCCTCCATTGTTGTTG
JMCP004E10+ TTGTTCTCCATGAATCCATTGTTGTTGTTGTTGTTGTTGagcAATCCTCCATTGTTGTTG
rJMCP007F07+ TTGTTCTCCATGAATCCATTGTTGTTGTTGTTGTTGTTGTCGAATCCTCCATTGTTGTTG
rJMFF049F20- TTGTTCTCCATGAATCCATTGTTGTTGTTGTTGTTGTTGTCGAATCCTCCATTGTTGTTG
rJMFF025H01- TTGTTCNCCATGAATCCATTGTTGTTGTTGTTGTTGTTGNCAAANCCNCCATTGTTGTTG
rJMCP008D07+ TTGTTCTCCATGAATCCATTGTTGTTGTTGTTGTTGTTGTCGAATCCTCCATTGTTGTTG
rJMCP009B02+ TTGTTCTCCATGAATCCATTGTTGTTGTTGTTGTTGTTGTCGAATCCTCCACTGTTGTTG
JMCP010D06+ TTGTTCTCCATGAATCCATTGTTGTTGTTGTTGTTGTTGTCGAATCCTCCATTGTTGTTG
JMCP010D07+ TTGTTCTCCATGAATCCATTGTTGTTGTTGTTGTTGTTGTCGAATCCTCCATTGTTGTTG
JMCP005C08+ TTGTTCTCCATGAATCCATTGTTGTTGTTGTTGTTGTTGTCGAATCCTCCATTGTTGTTG
JMCP020E10+ TTGTTCTCCATGAATCCATTGTTGTTGTTGTTGTTGTTGTCGAATCCTCCATTGTTGTTG
rJMCP007E08+ TTGTTCTCCATGAATCCATTGTTGTTGTTGTTGTTGTTGTCGAATCCTCCATTGTTGTTG
JMCP002C02+ TTGTTCTCCATGAATCCATTGTTGTTGTTGTTGTTGTTGTCGAATCCTCCATTGTTGTTG
rJMSF046F10- TNGTTCNCCANGAANCCATTGTNGTTGTTGTTGTTGTTGCCNAANCCNCCATNGTTGTTG
rJMCP004G02+ TTGTTCTCCATGAATCCATTGTTGTTGTTGTTGTTGTTGTCGAATCCTCCATTGTTGTTG
                      ____________________________________________________________
consensus TTGTTCTCCATGAATCCATTGTTGTTGTTGTTGTTGTTGTCGAATCCTCCATTGTTGTTG
 
. : . : . : . : . : . :
rJMSF046E16- AACNGGTTTCTTGAATTCNCGNANGGANGTCNGGNGTACTTCNCNGGGTNGACATCATAG
JMCP003H05+ AACTGGTTTCTTGAATTCTCGTATGGATGTCTGGCGTACTTCTCTGTGTTGACATCATAG
JMCP003A04+ AACTGGTTTCTTGAATTCTCGTATGGATGTCTGGCGTACTTCTCTGTGTTGACATCATAG
JMFS100F01+ AACTGGTTTCTTGAATTCTCGTATGGATGTCTGGCGTACTTCTCTGTGTTGACATCATAG
rJMSF023A06- AACTGGTTTCTTGAATTCNCGNATGGATGTCNGGCGTACTTCTCTGNGTTGACATCATAG
JMCP007H09+ AACTGGTTTCTTGAATTCTCGTATGGATGagTGGCGTACTTCTCTGTGTTGACATCATAG
JMCP009B09+ AACTGGTTTCTTGAATTCTCGTATGGATGTCTGGCGTACTTCTCTGTGTTGACATCATAG
JMCP018G11+ AACTGGTTTCTTGAATTCTCGTATGGATGTCTGGCGTACTTCTCTGTGTTGACATCATAG
JMFF003B22+ AACTGGTTTCTTGAATTCTCGTATGGATGTCTGGCGTACTTCTCTGTGTTGACATCATAG
JMCP004E10+ AACTGGTTTCTTGAATagTCGTATGGATGTCTGGCGTACTTCTCTGTGTTGACATCATAG
rJMCP007F07+ AACTGGTTTCTTGAATTCTCGTATGGATGTCTGGCGTACTTCTCTGTGTTGACATCATAG
rJMFF049F20- AACTGGTTTCTTGAATTCTCGTATGGATGTCTGGCGTACTTCTCTGTGTTGACATCATAG
rJMFF025H01- AACTGGTTTCTTGAATTCNCGNATGGATGTCTGGNGNACTTCTCTGGGTTGACATCANAN
rJMCP008D07+ AACTGGTTTCTTGAATTCTCGTATGGATGTCTGGCGTACTTCTCTGTGTTGACATCATAG
rJMCP009B02+ AACTGGTTTCTTGAATTCTCGTATGGATGTCTGGCGTACTTCTCTGTGTTGACATCATAG
JMCP010D06+ AACTGGTTTCTTGAATTCTCGTATGGATGTCTGGCGTACTTCTCTGTGTTGACATCATAG
JMCP010D07+ AACTGGTTTCTTGAtaagaacataGGATcagaccgcatgaagagacacaactgtagtata
JMCP005C08+ AACTGGTTTCTTGAATTCTCGTATGGATGTCTGGCGTACTTCTCTGTGTTGACATCATAG
JMCP020E10+ AACTGGTTTCTTGAATTCTCGTATGGATGTCTGGCGTACTTCTCTGTGTTGACATCATAG
rJMCP007E08+ AACTGGTTTCTTGAATTCTCGTATGGATGTCTGGCGTACTTCTCTGTGTTGACATCATAG
JMCP002C02+ AACTGGTTTCTTGAATTCTCGTACGGATGTCTGGCGTACTTCTCTGTGTTGACATCATAG
rJMSF046F10- AACNGGTTTCTTGAATTCNCGNANGGANGTCNGGCGNACTTCNCNGNGTTGACATCANAG
rJMCP004G02+ AACTGGTTTCTTGAATTCTCGTATGGATGTCTGGCGTACTTCTCTGTGTTGACATCATAG
                      ____________________________________________________________
consensus AACTGGTTTCTTGAATTCTCGTATGGATGTCTGGCGTACTTCTCTGTGTTGACATCATAG
 
. : . : . : . : . : . :
rJMSF046E16- TAANACCNCCCAT-TTTCCANGAATCTNGGGTCGCTCATCCCTNGCNGCTCAAACCNGTT
JMCP003H05+ TAATACCTCCCAT-TTTCCATGAATCTTGTGTCGCTCATCCCTTGCTGCTCAAACCTGTT
JMCP003A04+ TAATACCTCCCAT-TTTCCATGAATCTTGTGTCGCTCATCCCTTGCTGCTCAAACCTGTT
JMFS100F01+ TAATACCTCCCAT-TTTCCATGAATCTTGTGTCGCTCATCCCTTGCTGCTCAAACCTGTT
rJMSF023A06- TAATACCTCCCAT-TTTCCATGAATCTNGNGTCGCTCATCCCTTGCTGCTCAAACCTGTT
JMCP007H09+ TAATACCTCCCAT-TTTCCATGAATCTTGTGTCGCTCATCCCTTGCTGCTCAAACCTGTT
JMCP009B09+ TAATACCTCCCAa-aaTCCATGAATCTTGTGTCGCTCATCCCTTGCTGCTCAAACCTGTT
JMCP018G11+ TAATACCTCCCAT-TTTCCATGAATCTTGTGTCGCTCATCCCTTGCTGCTCAAACCTGTT
JMFF003B22+ TAATACCTCCCAT-TTTCCATGAATCTTGTGTCGCTCATCCCTTGCTGCTCAAACCTGTT
JMCP004E10+ TAATACCTCCCAT-TTTCCATGAATCTTGTGTCGCTCATCCCTTGCTGCTCAAACCTGTT
rJMCP007F07+ TAATACCTCCCAT-TTTCCATGAATCTTGTGTCGCTCATCCCTTGCTGCTCAAACCTGTT
rJMFF049F20- TAATACCTCCCAT-TTTCCATGAATCTTGTGTCGCTCATCCCTTGCTGCTCAAACCTGTT
rJMFF025H01- AAANACCNCCCAT-TTTCCATGAATCTTGNGTCNCTCATCCCTTGCTGCTCAAACCTGTT
rJMCP008D07+ TAATACCTCCCAT-TTTCCATGAATCTTGTGTCGCTCATCCCTTGCTGCTCAAACCTGTT
rJMCP009B02+ TAATACCTCCCAT-TTTCCATGAATCTTGTGTCGCTCATCCCTTGCTGCTCAAACCTGTT
JMCP010D06+ TAATACCTCCCAT-TTTCCATGAATCTTGTGTCGCTCATCCCTTGCTGCTCAAACCTGTT
JMCP010D07+ actatatggaggataaaggtacttagaacacagcaagtagggaacgacgTCAAACCTGTT
JMCP005C08+ TAATACCTCCCAT-TTTCCATGAATCTTGTGTCGCTCATCCCTTGCTGCTCAAACCTGTT
JMCP020E10+ TAATACCTCCCAT-TTTCCATGAATCTTGTGTCGCTCATCCCTTGCTGCTCAAACCTGTT
rJMCP007E08+ TAATACCTCCCAT-TTTCCATGAATCTTGTGTCGCTCATCCCTTGCTGCTCAAACCTGTT
JMCP002C02+ TAATACCTCCCAT-TTTCCATGAATCTTGTGTCGCTCATCCgaaGCTGCTCAAACCTGTT
rJMSF046F10- TAATNCCNCCCAT-TTTCCANGAATCTNGGGNCGCTCANCCCTNGCNGCTCAAACCNGTT
rJMCP004G02+ TAATACCTCCCAT-TTTCCATGAATCTTGTGTCGCTCATCCCTTGCTGCTCAAACCTGTT
                      ____________________________________________________________
consensus TAATACCTCCCAT-TTTCCATGAATCTTGTGTCGCTCATCCCTTGCTGCTCAAACCTGTT
 
. : . : . : . : . : . :
rJMSF046E16- TGCAGCGCCNCCGTTGTTGTAGTTGTAGCGGTTGCCG
JMCP003H05+ TGCAGCGCCGCCGTTGTTGTAGTTGTAGCGGTTGCCGCCGCCGCCGCCGGTGGTGGTGGT
JMCP003A04+ TGCAGCGCCGCCGTTGTTGTAGTTGTAGCGGTTG---CCGCCGCCGCCGGTGGTGGTGGT
JMFS100F01+ TGCAGCGCCGCCGTTGTTGTAGTTGTAGCGGTTGCCGCCG
rJMSF023A06- TGCAGCGCCGCCGTTGTTGTAGTTGTAGCGGTTGCCGCC
JMCP007H09+ TGgtcCGCCGCCGTTGTTGTAGTTGTAGCGGTTGCCGCCGCCGCCGCCGGTGGTGGTGGT
JMCP009B09+ TGCAGCGCCGCCGTTGTTGTAGTTGTAGCGGTTGCCGCCGCCGCCGCCGGTGGTGGTGGT
JMCP018G11+ TGCAGCGCCGCCGTTGTTGTAGTTGTAGCGGTTGCCGCCGCCGCCGCCGGTGGTGGTGGT
JMFF003B22+ TGCAGCGCCGCCGTTGTTGTAGTTGTAGCGGTTGCCGCC
JMCP004E10+ TGCAGCGCCGCCGTTGTTGTAGTTGTAGCGGTTGCCGCCGCCGCCGCCGGTGGTGGTGGT
rJMCP007F07+ TGCAGCGCCGCCGTTGTTGTAGTTGTAGCGGTTGCCGCCGCCGCCGCCGGTGGTGGTGGT
rJMFF049F20- TGCAGCGCCGCCGTTGTTGT
rJMFF025H01- TGCANCNCCNCCGTTGTTGTANTTGTANCGGTTGCC
rJMCP008D07+ TGCAGCGCCGCCGTTGTTGTAGTTGTAGCGGTTG---CCGCCGCCGCCGGTGGTGGTGGT
rJMCP009B02+ TGCAGCGCCGCCGTTGTTGTAGTTGTAGCGGTTGCCGCCGCCGCCGCCGGTGGTGGTGGT
JMCP010D06+ TGCAGCGCCGCCGTTGTTGTAGTTGTAGCGGTTGCCGCCGCCGCCGCCGGTGGTGGTGGT
JMCP010D07+ TGCAGCGCCGCCGTTGTTGTAGTTGTAGCGGTTGCCGCCGCCGCCGCCGGTGGTGGTGGT
JMCP005C08+ TGCAGCGCCGCCGTTGTTGTAGTTGTAGCGGTTGCCGCCGCCGCCGCCGGTGGTGGTGGT
JMCP020E10+ TGCAGCGCCGCCGTTGTTGTAGTTGTAGCGGTTGCCGCCGCCGCCGCCGGTGGTGGTGGT
rJMCP007E08+ TGCAGCGCCGCCGTTGTTGTAGTTGTAGCGGTTGCCGCCGCCGCCGCCGGTGGTGGTGGT
JMCP002C02+ TGCAGCGCCGCCGTTGTTGTAGTTGTAGCGGTTGCCGCCGCCGCCGCCGGTGGTGGTGGT
rJMSF046F10- TGCANCGCCNCCGTTGTTGTATTTGNANCGGTTGCCNCCNCCNCCNCCGGNGGNGGNGGN
rJMCP004G02+ TGCAGCGCCGCCGTTGTTGTAGTTGTAGCGGTTGCCGCCGCCGCCGCCGGTGGTGGTGGT
                      ____________________________________________________________
consensus TGCAGCGCCGCCGTTGTTGTAGTTGTAGCGGTTGCCGCCGCCGCCGCCGGTGGTGGTGGT
 
. : . : . : . : . : . :
JMCP003H05+ GGGGAAGGTTTCTTCTCGGTTGTTGGTGTAGTAGTAGTTGTTGTTGTTGTCAGTGTTGAA
JMCP003A04+ GGGGAAGGTTTCTTCTCGGTTGTTGGTGTAGTAGTAGTTGTTGTTGTTGTCAGTGTTGAA
JMCP007H09+ GGGGAAGGTTTCTTCTCGGTTGTTGGTGTAGTAGTAGTTGTTGTTGTTGTCAGTGTTGAA
JMCP009B09+ GGGGAAGGTTTCTTCTCGGTTGTTGGTGTAGTAGTAGTTGTTGTTGTTGTCAGTGTTGAA
JMCP018G11+ GGGGAAGGTTTCTTCTCGGTTGTTGGTGTAGTAGTAGTTGTTGTTGTTGTCAGTGTTGAA
JMCP004E10+ GGGGAAGGTTTCTTCTCGGTTGTTG
rJMCP007F07+ GGGGAAGGTTTCTTCTCGGTTGTTGGTGTAGTAGTAGTTGTTGTTGTTGTCAGTGTTGAA
rJMCP008D07+ GGGGAAGGTTTCTTCTCGGTTGTTGGTGTAGTAGTAGTTGTTGTTGTTGTCAGTGTTGAA
rJMCP009B02+ GGGGAAGGTTCCTTCTCGGTTGTTGGTGTAGTAGTAGTTGTTGTTGTTGTCAGTGTTGAA
JMCP010D06+ GGGGAAGGTTTCTTCTCGGTTGTTGGTGTAGTAGTAGTTGTTGTTGTTGTCAGTGTTGAA
JMCP010D07+ GGGGAAGGTTTCTTCTCGGTTGTTGGTGTAGTAGTAGTTGTTGTTGTTGTCAGTGTTGAA
JMCP005C08+ GGGGAAGGTTTCTTCTCGGTTGTTGGTGTAGTAGTAGTTGTTGTTGTTGTCAGTGTTGAA
JMCP020E10+ GGGGAAGGTTTCTTCTCGGTTGTTGGTGTAGTAGTAGTTGTTGTTGTTGTCAGTGTTGAA
rJMCP007E08+ GGGGAAGGTTTCTTCTCGGTTGTTGGTGTAGTAGTAGTTGTTGTTGTTGTCAGTGTTGAA
JMCP002C02+ GGGGAAGGTTTCTTCTCGGTTGTTGGTGTAGTAGTAGTTGTTGTTGTTGTCAGTGTTGAA
rJMSF046F10- GGGGAAGGTTNCTTCNCGGTTGTTGGTGAAGAANTANTTGTTGTTGT
rJMCP004G02+ GGGGAAGGTTTCTTCTCGGTTGTTGGTGTAGTAGTAGTTGTTGTTGTTGTCAGTGTTGAA
                      ____________________________________________________________
consensus GGGGAAGGTTTCTTCTCGGTTGTTGGTGTAGTAGTAGTTGTTGTTGTTGTCAGTGTTGAA