Contig 001532:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP003D05Sequence546003025 (4)ref|XP_009605076.1|2e-48PREDICTED: BOI-related E3 ubiquitin-protein ligase 1-like [Nicotiana tomentosif630001532 (2)ref|XP_009765518.1|6e-43PREDICTED: alpha/beta hydrolase domain-containing protein 17C-like [Nicotiana s
JMFF020L07Sequence594001532 (2)ref|XP_011099063.1|3e-38PREDICTED: alpha/beta hydrolase domain-containing protein 17C [Sesamum indicum]702022330emb|CDP02355.1|3e-37unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFF020L07+                                                         TCATACCCCATCAG
rJMCP003D05+                                        TCCATACCCTGAATAATCATACCCCATCAG
                      ____________________________________________________________
consensus                                           TCCATACCCTGAATAATCATACCCCATCAG
 
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JMFF020L07+           ATTGACGCGGAGATGACGACTTAATTCACAGAACAGCTCGTACATCTGACCCAGATCAGC
rJMCP003D05+          ATTGACGCGGAGATGACGACTTAATTCACAGAACAGCTgcTACATCTGACCCAGATCAGC
                      ____________________________________________________________
consensus             ATTGACGCGGAGATGACGACTTAATTCACAGAACAGCTCGTACATCTGACCCAGATCAGC
 
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JMFF020L07+           AGCGTTGCCGTGGGAGTATAGCAGAGTTAGCTTCGCCGCCGGATTCCTGACGTAAACCGC
rJMCP003D05+          AGCGTTGCCGTGGGAGTATAGCAGAGTTAGCTTCGCCGCCGGATTCCTGACGTAAACCGC
                      ____________________________________________________________
consensus             AGCGTTGCCGTGGGAGTATAGCAGAGTTAGCTTCGCCGCCGGATTCCTGACGTAAACCGC
 
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JMFF020L07+           CACAATTTCCGTCCCTCTCTTGGTAGCCAGCTTCAGCACATCCACGTTCTCCCTCTCCTC
rJMCP003D05+          CACAATTTCCGTCCCTCTCTTGGTAGCCAGCTTCAGCACATCCACGTTCTCCCTCTCCTC
                      ____________________________________________________________
consensus             CACAATTTCCGTCCCTCTCTTGGTAGCCAGCTTCAGCACATCCACGTTCTCCCTCTCCTC
 
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JMFF020L07+           CACCTCCGTCATCTTCAATTTCGCGGCGGATCCTTCCAAAACCACCTCATAAGACGGCGG
rJMCP003D05+          gACCTCCGTCATCTTCAATTTCGCGGCGGATCCTTCCAAAACCACCTCATAAGACGGCGG
                      ____________________________________________________________
consensus             CACCTCCGTCATCTTCAATTTCGCGGCGGATCCTTCCAAAACCACCTCATAAGACGGCGG
 
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JMFF020L07+           ATTCGGCGGAAAAAACGCAAACCGTGCCGCCACCGACGACGTCATCGCCCCCATCCTTGT
rJMCP003D05+          ATTCGGCGGAAAAAACGCAAACCGTGCCGCCACCGACGACGTCATCGCCCCCATCCTTGT
                      ____________________________________________________________
consensus             ATTCGGCGGAAAAAACGCAAACCGTGCCGCCACCGACGACGTCATCGCCCCCATCCTTGT
 
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JMFF020L07+           CACCACCAACCCTATAAATGCATATACCAACAGATACAGATATAGAAAAATTGGTATCTA
rJMCP003D05+          CACCACCAACCCTATAAATGCATATACCAACAGATACAGATATAGAAAAATTGGTATCTA
                      ____________________________________________________________
consensus             CACCACCAACCCTATAAATGCATATACCAACAGATACAGATATAGAAAAATTGGTATCTA
 
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JMFF020L07+           CTCAAGGCCTTCTATAAAAAGCAGTTTTGCACACAACAATGTGCGGCTGAAATGGACGGA
rJMCP003D05+          CTCAAGGCgaaCTATAAAAAGCAGTTTTGCACACAACAATGTGCGGCTGAAATGGACGGA
                      ____________________________________________________________
consensus             CTCAAGGCCTTCTATAAAAAGCAGTTTTGCACACAACAATGTGCGGCTGAAATGGACGGA
 
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JMFF020L07+           CAGGATTTCTGGAAGCAGGTGTGATTGGGAGTGTAGCGGAGGAACAGACAACGATGATAG
rJMCP003D05+          CAGGATTTCTGGAAGCAGGTGTGATTGGGGGTGTAGCGGAGGAACAGACAACGATGATAG
                      ____________________________________________________________
consensus             CAGGATTTCTGGAAGCAGGTGTGATTGGGGGTGTAGCGGAGGAACAGACAACGATGATAG
 
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JMFF020L07+           GTAACTGGACGGAGGTATTTCCGGAACACGTGACGGTTAGGGTTTCGTGTAATGGTGACT
rJMCP003D05+          GTAACTGGACGGAGGTATTTCCGGAACACGTGACGGTTAGGGTTTCGTGTAATGGTGACT
                      ____________________________________________________________
consensus             GTAACTGGACGGAGGTATTTCCGGAACACGTGACGGTTAGGGTTTCGTGTAATGGTGACT
 
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JMFF020L07+           GGTGAGAGAGAGAGAGAGAGAGTACGGCGGGGTGAGCTCC                    
rJMCP003D05+          GGTGAGAGAGAGAGAGAGAGAGTACGGCGGGGTGAGCTCgcGAGCaCCGGTCCGTGATGG
                      ____________________________________________________________
consensus             GGTGAGAGAGAGAGAGAGAGAGTACGGCGGGGTGAGCTCCGGAGCTCCGGTCCGTGATGG