Contig 001529:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP001F05Sequence517001529 (2)ref|XP_002520194.1|9e-05conserved hypothetical protein [Ricinus communis] gb|EEF42249.1| conserved hypot
JMCP001F12Sequence517001529 (2)ref|XP_002520194.1|9e-05conserved hypothetical protein [Ricinus communis] gb|EEF42249.1| conserved hypot

Alignment

This contig is upended


. : . : . : . : . : . :
rJMCP001F05+ AAAATTTAAAACTGGAAGGGGAAACCCAAGTTGTA
rJMCP001F12+ GTAAAATTTAAAACTGGAAGGGGAAACCCAAGTTGTA
                      ____________________________________________________________
consensus GTAAAATTTAAAACTGGAAGGGGAAACCCAAGTTGTA
 
. : . : . : . : . : . :
rJMCP001F05+ GTACAGCAATTAGCTGGATTTATAAACCTCCCGCCATCTAGGCACACCAGAAATATCAGC
rJMCP001F12+ GTACAGCAATTAGCTGGATTTATAAACCTCCCGCCATCTAGGCACACCAGAAATATCAGC
                      ____________________________________________________________
consensus GTACAGCAATTAGCTGGATTTATAAACCTCCCGCCATCTAGGCACACCAGAAATATCAGC
 
. : . : . : . : . : . :
rJMCP001F05+ ATCGATTAGTCCTCAGATTTCATTAGGTGAGCTGATAACTTCGCCAGGGCATCCGTTACT
rJMCP001F12+ ATCGATTAGTCCTCAGATTTCATTAGGTGAGCTGATAACTTCGCCAGGGCATCCGTTACT
                      ____________________________________________________________
consensus ATCGATTAGTCCTCAGATTTCATTAGGTGAGCTGATAACTTCGCCAGGGCATCCGTTACT
 
. : . : . : . : . : . :
rJMCP001F05+ TGGTTTTGATCATGGACGATTGGCTCAACTTGCCATACTTCCAGATTGCGTAACTCTTTC
rJMCP001F12+ TGGTTTTGATCATGGACGATTGGCTCAACTTGCCATACTTCCAGATTGCGTAACTCTTTC
                      ____________________________________________________________
consensus TGGTTTTGATCATGGACGATTGGCTCAACTTGCCATACTTCCAGATTGCGTAACTCTTTC
 
. : . : . : . : . : . :
rJMCP001F05+ TTACATGCTTCTTGGATATTATGGGCGGCAGTCCTCGACTTACCATCGCTATTCAAACAC
rJMCP001F12+ TTACATGCTTCTTGGATATTATGGGCGGCAGTCCTCGACTTACCATCGCTATTCAAACAC
                      ____________________________________________________________
consensus TTACATGCTTCTTGGATATTATGGGCGGCAGTCCTCGACTTACCATCGCTATTCAAACAC
 
. : . : . : . : . : . :
rJMCP001F05+ TGCCTTTCTAAACCCCATTGATACTGCTAGCTGAATTCCTTTCAAGAGTGCCCAGGCTTC
rJMCP001F12+ TGCCTTTCTAAACCCCATTGATACTGCTAGCTGAATTCCTTTCAAGAGTGCCCAGGCTTC
                      ____________________________________________________________
consensus TGCCTTTCTAAACCCCATTGATACTGCTAGCTGAATTCCTTTCAAGAGTGCCCAGGCTTC
 
. : . : . : . : . : . :
rJMCP001F05+ TGCTTCTAACGGAGAACAGTTGCCAATACTATATGTAAATCCCATCCACGTATATTCTGT
rJMCP001F12+ TGCTTCTAACGGAGAACAGTTGCCAATACTATATGTAAATCCCATCCACGTATATTCTGT
                      ____________________________________________________________
consensus TGCTTCTAACGGAGAACAGTTGCCAATACTATATGTAAATCCCATCCACGTATATTCTGT
 
. : . : . : . : . : . :
rJMCP001F05+ ATATGGATTTACAGAACCATCCACGTTGACTTTAACAAACTCTTGCGGAGGACTCATACA
rJMCP001F12+ ATATGGATTTACAGAACCATCCACGTTGACTTTAACAAACTCTTGCGGAGGACTCATACA
                      ____________________________________________________________
consensus ATATGGATTTACAGAACCATCCACGTTGACTTTAACAAACTCTTGCGGAGGACTCATACA
 
. : . : . : . : . : . :
rJMCP001F05+ ACACAGTTGCTTCCAGGAGGAGTGATCTGATTGTGACGAGAAGCCTTTTGCCGTTCCAAA
rJMCP001F12+ ACACAGTTGCTTCCAGGAGGAGTGATCTGATTGTGACGAGAAGCCTTTTGCCGTTCCAAA
                      ____________________________________________________________
consensus ACACAGTTGCTTCCAGGAGGAGTGATCTGATTGTGACGAGAAGCCTTTTGCCGTTCCAAA