Contig 001529:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMCP001F05+                                   AAAATTTAAAACTGGAAGGGGAAACCCAAGTTGTA
rJMCP001F12+                                 GTAAAATTTAAAACTGGAAGGGGAAACCCAAGTTGTA
                      ____________________________________________________________
consensus                                    GTAAAATTTAAAACTGGAAGGGGAAACCCAAGTTGTA
 
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rJMCP001F05+          GTACAGCAATTAGCTGGATTTATAAACCTCCCGCCATCTAGGCACACCAGAAATATCAGC
rJMCP001F12+          GTACAGCAATTAGCTGGATTTATAAACCTCCCGCCATCTAGGCACACCAGAAATATCAGC
                      ____________________________________________________________
consensus             GTACAGCAATTAGCTGGATTTATAAACCTCCCGCCATCTAGGCACACCAGAAATATCAGC
 
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rJMCP001F05+          ATCGATTAGTCCTCAGATTTCATTAGGTGAGCTGATAACTTCGCCAGGGCATCCGTTACT
rJMCP001F12+          ATCGATTAGTCCTCAGATTTCATTAGGTGAGCTGATAACTTCGCCAGGGCATCCGTTACT
                      ____________________________________________________________
consensus             ATCGATTAGTCCTCAGATTTCATTAGGTGAGCTGATAACTTCGCCAGGGCATCCGTTACT
 
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rJMCP001F05+          TGGTTTTGATCATGGACGATTGGCTCAACTTGCCATACTTCCAGATTGCGTAACTCTTTC
rJMCP001F12+          TGGTTTTGATCATGGACGATTGGCTCAACTTGCCATACTTCCAGATTGCGTAACTCTTTC
                      ____________________________________________________________
consensus             TGGTTTTGATCATGGACGATTGGCTCAACTTGCCATACTTCCAGATTGCGTAACTCTTTC
 
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rJMCP001F05+          TTACATGCTTCTTGGATATTATGGGCGGCAGTCCTCGACTTACCATCGCTATTCAAACAC
rJMCP001F12+          TTACATGCTTCTTGGATATTATGGGCGGCAGTCCTCGACTTACCATCGCTATTCAAACAC
                      ____________________________________________________________
consensus             TTACATGCTTCTTGGATATTATGGGCGGCAGTCCTCGACTTACCATCGCTATTCAAACAC
 
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rJMCP001F05+          TGCCTTTCTAAACCCCATTGATACTGCTAGCTGAATTCCTTTCAAGAGTGCCCAGGCTTC
rJMCP001F12+          TGCCTTTCTAAACCCCATTGATACTGCTAGCTGAATTCCTTTCAAGAGTGCCCAGGCTTC
                      ____________________________________________________________
consensus             TGCCTTTCTAAACCCCATTGATACTGCTAGCTGAATTCCTTTCAAGAGTGCCCAGGCTTC
 
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rJMCP001F05+          TGCTTCTAACGGAGAACAGTTGCCAATACTATATGTAAATCCCATCCACGTATATTCTGT
rJMCP001F12+          TGCTTCTAACGGAGAACAGTTGCCAATACTATATGTAAATCCCATCCACGTATATTCTGT
                      ____________________________________________________________
consensus             TGCTTCTAACGGAGAACAGTTGCCAATACTATATGTAAATCCCATCCACGTATATTCTGT
 
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rJMCP001F05+          ATATGGATTTACAGAACCATCCACGTTGACTTTAACAAACTCTTGCGGAGGACTCATACA
rJMCP001F12+          ATATGGATTTACAGAACCATCCACGTTGACTTTAACAAACTCTTGCGGAGGACTCATACA
                      ____________________________________________________________
consensus             ATATGGATTTACAGAACCATCCACGTTGACTTTAACAAACTCTTGCGGAGGACTCATACA
 
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rJMCP001F05+          ACACAGTTGCTTCCAGGAGGAGTGATCTGATTGTGACGAGAAGCCTTTTGCCGTTCCAAA
rJMCP001F12+          ACACAGTTGCTTCCAGGAGGAGTGATCTGATTGTGACGAGAAGCCTTTTGCCGTTCCAAA
                      ____________________________________________________________
consensus             ACACAGTTGCTTCCAGGAGGAGTGATCTGATTGTGACGAGAAGCCTTTTGCCGTTCCAAA