Contig 001523:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMCP006F11+                                                            TGGCCCAAAA
JMCP009G11+                                                          CAATGGCCCAAAA
                      ____________________________________________________________
consensus                                                            CAATGGCCCAAAA
 
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rJMCP006F11+          TCTAGGTTGGGAAGCCTTAGTTCCAAGATGTCGTTGGCGGTGGAAGTTAAACCCTACCTT
JMCP009G11+           TCTAGGTTGGGAAGCCTTAGTTCCAAGATGTCGTTGGCGGTGGAAGTTAAACCCTACCTT
                      ____________________________________________________________
consensus             TCTAGGTTGGGAAGCCTTAGTTCCAAGATGTCGTTGGCGGTGGAAGTTAAACCCTACCTT
 
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rJMCP017E06+                     GGTGACTTTATGCTAGATGGTTTACCACTTGAGCTAGCCTCGCCGGGTA
rJMCP006F11+          GTTACTAAAGAGGTGACTTTATGCTAGATGGTTTACCACTTGAGCTAGCCTCGCCGGGTA
JMCP009G11+           GTTACTAAAGAGGTGACTTTATGCTAGATGGTTTACCACTTGAGCTAGCCTCGCCGGGTA
                      ____________________________________________________________
consensus             GTTACTAAAGAGGTGACTTTATGCTAGATGGTTTACCACTTGAGCTAGCCTCGCCGGGTA
 
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rJMCP017E06+          TGCACTAATTATTGGGTTTTAGGGGTATTATTGTAAAAACTAACACTTGTTCGATTTGGA
rJMCP006F11+          TGCACTAATTATTGGGTTTTAGGGGTATTATTGTAAAAACTAACACTTGTTCGATTTGGA
JMCP009G11+           TGCACTAATTATTGGGTTTTAGGGGTATTATTGTAAAAACTAACACTTGTTCGATTTGGA
                      ____________________________________________________________
consensus             TGCACTAATTATTGGGTTTTAGGGGTATTATTGTAAAAACTAACACTTGTTCGATTTGGA
 
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rJMCP017E06+          AAATGGAAAAACATAATGAAATGTGTTCAAAGGCTAGAAAAGAGTGTTAGTTAGTATATT
rJMCP006F11+          AAATGGAAAAACATAATGAAATGTGTTCAAAGGCTAGAAAAGAGTGTTAGTTAGTATATT
JMCP009G11+           AAATGGAAAAACATAATGAAATGTGTTCAAAGGCTAGAAAAGAGTGTTAGTTAGTATATT
                      ____________________________________________________________
consensus             AAATGGAAAAACATAATGAAATGTGTTCAAAGGCTAGAAAAGAGTGTTAGTTAGTATATT
 
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rJMCP017E06+          TTGTCCAAAGACAATTTGTTTGCCTTTTTTCCTTCTTTTTCGTTCAGTAAATGCAGGCCA
rJMCP006F11+          TTGTCCAAAGACAATTTGTTTGCCTTTTTTCCTTCTTTTTCGTTCAGTAAATGCAGGCCA
JMCP009G11+           TTGTCCAAAGACAATTTGTTTGCCTTTTTTCCTTCTTTTTCGTTCAGTAAATGCAGGCCA
                      ____________________________________________________________
consensus             TTGTCCAAAGACAATTTGTTTGCCTTTTTTCCTTCTTTTTCGTTCAGTAAATGCAGGCCA
 
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rJMCP017E06+          TGTGAAGAACTGTCATGAAAGTATATGTTTTTAGTATATAACAATACAAATTCCATTGCG
rJMCP006F11+          TGTGAAGAACTGTCATGAAAGTATATGTTTTTAGTATATAACAATACAAATTCCATTGCG
JMCP009G11+           TGTGAAGAACTGTCATGAAAGTATATGTTTTTGGTATATAACAATACAAATTCCATTGCG
                      ____________________________________________________________
consensus             TGTGAAGAACTGTCATGAAAGTATATGTTTTTAGTATATAACAATACAAATTCCATTGCG
 
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rJMCP017E06+          TATATCAGTTGATATGTATATGTATATGTATAGGCAGAATATACCCGTATCTTGCATGAA
rJMCP006F11+          TATATCAGTTGATATGTATATGTATATGTATAGGCAGAATATACCCGTATCTTGCATGAA
rJMCP020G03+                                TATATGTATAGGCAGAATATACCCGTATCTTGCATGAA
JMCP009G11+           TATATCAGTTGATATGTATATGTATATGTATAGGCAGAATATACCCGTATCTTGCATGAA
                      ____________________________________________________________
consensus             TATATCAGTTGATATGTATATGTATATGTATAGGCAGAATATACCCGTATCTTGCATGAA
 
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rJMCP017E06+          TGTATAGACAAGTGTATTCCTGGTTTGGAGATCTCTTGCAACGTGGACTATTGGCCTATT
rJMCP006F11+          TGTATAGACAAGTGTATTCCTGGTTTGGAGATCTCTTGCAACGTGGACTATTGGCCTATT
rJMCP020G03+          TGTATAGACAAGTGTATTCCTGGTTTGGAGATCTCTTGCAACGTGGACTATTGGCCTATT
JMCP009G11+           TGTATAGACAAGTGTATTCCTGGTTacGAGATCTCTTGCAACGTGGACTATTGGCCTATT
                      ____________________________________________________________
consensus             TGTATAGACAAGTGTATTCCTGGTTTGGAGATCTCTTGCAACGTGGACTATTGGCCTATT
 
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rJMCP017E06+          ACAATAAACGGAAAAGTGTGATCTTGGCCTTGTAGTATAGTGTAGGA-GTGTACTCACAA
rJMCP006F11+          ACAATAAACGGAAAAGTGTGATCTTGGCCTTGTAGTATAGTGTAGGA-GTGTACTCACAA
rJMCP020G03+          ACAATAAACGGAAAAGTGTGATCTTGcggaacTAGTAatcacatcctccccataagtgtt
JMCP009G11+           ACAATAAACGGAAAAGTGTGATCTTGGCCTTGTAGTATAGTGTAGGA-GTGTACTCACAA
                      ____________________________________________________________
consensus             ACAATAAACGGAAAAGTGTGATCTTGGCCTTGTAGTATAGTGTAGGA-GTGTACTCACAA
 
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rJMCP017E06+          AACTAGCGTGAAAGCGGCGATTCTAGCTAGTAATACTCGATCTCCACCTTAGCTTTCAC 
rJMCP006F11+          AACTAGCGTGAAAGCGGCGATTCTAGCTAGTAATACTCGATCTCCACCTTAGCTTTCAC 
rJMCP020G03+          ttCTAGCGTGAAAGCGGCGATTCTAGCTAGTAATACTCGATCTCCACCTTAGCTTTCAC 
JMCP009G11+           AACTAGCGTGAAAGCGGCGATTCTAGCTAGTAATACTCGATCTCCACCTTAGCTTTCACT
                      ____________________________________________________________
consensus             AACTAGCGTGAAAGCGGCGATTCTAGCTAGTAATACTCGATCTCCACCTTAGCTTTCACT