Contig 001522:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMCP001F07+                        GGAACGATAGTATGACACGATTTTAATTACTGAAATAGCCGTCGTTG
JMCP001E07+                        GGAACGATAGTATGACACGATTTTAATTACTGAAATAGCCGTCGTTG
JMCP017H06+                        GGAACGATAGTATGACACGATTTTAATTACTGAAATAGCCGTCGTTG
rJMCP019F11+                       GGAACGATAGTATGACACGATTTTAATTACTGAAATAGCCGTCGTTG
rJMCP009C11+                       GAAACGATAGTATGACACGATTTTAATTACTGAAATAGCCGTCGTTG
rJMCP001G10+                       GAAACGATAGTATGACACGATTTTAATTACTGAAATAGCCGTCGTTG
JMCP009C09+                       CGGAACGATAGTATGACACGATTTTAATTACTGAAATAGCCGTCGTTG
JMCP018F01+                        GAAACGATAGTATGACACGATTTTAATTACTGAAATAGCCGTCGTTG
JMCP005H08+                        GAAACGATAGTATGACACGATTTTAATTACTGAAATAGCCGTCGTTG
JMCP020F01+                         AAACGATAGTATGACAgcATTTTAATTACTGAAATAGCCGTCGTTG
rJMCP002C11+                        AAACGATAGTATGACACGATTTTAATTACTGAAATAGCCGTCGTTG
JMCP017E05+                          AACGATAGTATGACACGATTTTAATTACTGAAATAGCCGTCGTTG
rJMCP006D05+                        GAACGATAGTATGACACGATTTTAATTACTGAAATAGCCGTCGTTG
JMCP005E11+                          AACGATAGTATGACACGATTTTAATTACTGAAATAGCCGTCGTTG
rJMCP010D02+                         ttgctatcatactgtgctaaTattaatgactttatcggcagcaac
JMCP005C02+                          AACGATAGTATGACACGATTTTAATTACTGAAATAGCCGGCGTTG
rJMCP001B12+                         AACGATAGTATGACACGATTTTAATTACTGAAATAGCCGTCGTTG
JMCP009D04+                        GAAACGATAGTATGACACGATTTTAATTACTGAAAatcggcagGTTG
                      ____________________________________________________________
consensus                         CGAAACGATAGTATGACACGATTTTAATTACTGAAATAGCCGTCGTTG
 
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JMCP001F07+           ACACAACATGACTTCCATGGCCTAACGTGTCCCTTGTTGACAAAAATGGCACTCCAAGGC
JMCP001E07+           ACACAACATGACTTCCATGGCCTAACGTGTCCCTTGTTGACAAAAATGGCACTCCAAGGC
JMCP017H06+           ACACAACATGACTTCCATGGCCTAACGTGTCCCTTGTTGACAAAAATGGCACTCCAAGGC
rJMCP019F11+          ACACAACATGACTTCCATGGCCTAACGTGTCCCTTGTTGACAAAAATGGCACTCCAAGGC
rJMCP009C11+          ACACAACATGACTTCCATGGCCTAACGTGCCCCTTGTTGACAAAAATGGCACTCCAAGGC
rJMCP001G10+          ACACAACATGACTTCCATGGCCTAACGTGTCCCTTGTTGACAAAAATGGCACTCCAAGGC
JMCP009C09+           ACACAACATGACTTCCATGGCCTAACGTGTCCCTTGTTGACAAAAATGGCACTCCAAGGC
JMCP018F01+           ACACAACATGACTTCCATGGCCTAACGTGTCCCTTGTTGACAAAAATGGCACTCCAAGGC
JMCP005H08+           ACACAACATGACTTCCATGGCCTAACGTGTCCCTTGTTGACAAAAATGGCACTCCAAGGC
JMCP020F01+           ACACAACATGACTTCCATGGCCTAACGTGTCCCTTGTTGACAAAAATGGCACTCCAAGGC
rJMCP002C11+          ACACAACATGACTTCCATGGCCTAACGTGTCCCTTGTTGACAAAAATGGCACTCCAAGGC
JMCP017E05+           ACACAACATGACTTCCATGGCCTAACGTGTCCCTTGTTGACAAAAATGGCACTCCAAGGC
rJMCP006D05+          ACACAACATGACTTCCATGGCCTAACGTGTCCCTTGTTGACAAAAATGGCACTCCAAGGC
JMCP005E11+           ACACAACATGACTTCCATGGCCTAACGTGTCCCTTGTTGACAAAAATGGCACTCCAAGGC
rJMCP010D02+          tgtCAACATGACaaggtaccggatACGTGTCCgaacaTGACAAAAATGGCACTCCAAGGC
JMCP005C02+           ACACAACATGACTCCCATGGCCTAACGTGTCCCTTGTTGACAAAAATGGCACTCCAAGGC
rJMCP001B12+          ACACAACATGACTTCCATGGCCTAACGTGTCCCTTGTTGACAAAAATGGCACTCCAAGGC
JMCP009D04+           ACACAACATGACTTCCATGGCCTAACGTGTCCCTTGTTGACAAAAATGGCACTCCAAGGC
                      ____________________________________________________________
consensus             ACACAACATGACTTCCATGGCCTAACGTGTCCCTTGTTGACAAAAATGGCACTCCAAGGC
 
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JMCP001F07+           ATCGTAGTAAAATCTAGCCCCAATTAATTTCCTAATAAGAGTCCCAACAAAGATTTATAT
JMCP001E07+           ATCGTAGTAAAATCTAGCCCCAATTAATTTCCaAATAAGAGTCCCAACAAAGATTTATAT
JMCP017H06+           ATCGTAGTAAAATCTAGCCCCAATTAATTTCCTAATAAGAGTCCCAACAAAGATTTATAT
rJMCP019F11+          ATCGTAGTAAAATCTAGCCCCAATTAATTTCCTAATAAGAGTCCCAACAAAGATTTATAT
rJMCP009C11+          ATCGTAGTAAAATCTAGCCCgttTTAATTTCCTAATAAGAGTCCCAACAAAGATTTATAT
rJMCP001G10+          ATCGTAGTAAAATCTAGCCCCAATTAATTTCCTAATAAGAGTCCCAACAAAGATTTATAT
JMCP009C09+           ATCGTAGTAAAATCTAGCCCCAATTAATTTgCTAATAAGAGTCCCAACAAAGATTTATAT
JMCP018F01+           ATCGTAGTAAAATCTAGCCCCAATTAATTTCCTAATAAGAGTCCCAACAAAGATTTATAT
JMCP005H08+           ATCGTAGTAAAATCTAGCCCCAATTAATTTCCTAATAAGAGTCCCAACAAAGATTTATAT
JMCP020F01+           ATCGTAGTAAAATCTAGCCCCAATTAATTTCCTAATAAGAGTCCCAACAAAGATTTATAT
rJMCP002C11+          ATCGTAGTAAAATCTAGCCCCAATTAATTTCCTAATAAGAGTCCCAACAAAGATTTATAT
JMCP017E05+           ATCGTAGTAAAATCTAGCCCCAATTAATTTCCTAATAAGAGTCCCAACAAAGATTTATAT
rJMCP006D05+          ATCGTAGTAAAATCTAGCCCCAATTAATTTCCTAATAAGAGTCCCAACAAAGATTTATAT
JMCP005E11+           ATCGTAGTAAAATCTAGCCCCAATTAATTTCCTAATAAGAGTCCCAACAAAGATTTATAT
rJMCP010D02+          ATCGTAGTAAGATCTAGCCCCAATTAATTTCCTAATAAGAGTCCCAACAAAGATTTATAT
JMCP005C02+           ATCGTAGTAAAATCTAGCCCCAATTAATTTCCTAATAAGAGTCCCAACAAAGATTTATAT
rJMCP001B12+          ATCGTAGTAAAATCTAGCCCCAATTAATTTCCTAATAAGAGTCCCAACAAAGATTTATAT
JMCP009D04+           AagcTAGTAAAATCTAGCCCCAATTAATTTggaAATAAGAGTCCCAACAAAGATTatTAT
                      ____________________________________________________________
consensus             ATCGTAGTAAAATCTAGCCCCAATTAATTTCCTAATAAGAGTCCCAACAAAGATTTATAT
 
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JMCP001F07+           AAGTTGCTAGCTAAGCTACTCAAATACACTGtAggaacGACATGAAACTAGCTTGagaTC
JMCP001E07+           AAGTTGCTAGCTAAGCTACTCAAATACACTGAACCTTGGACATGAAACTAGCTTGTCTTC
JMCP017H06+           AAGTTGCTAGCTAAGCTACTCAAATACACTGAACCTTGGACATGAAACTAGCTTGTCTTC
rJMCP019F11+          AAGTTGCTAGCTAAGCTACTCAAATACACTGAACCTTGGACATGAAACTAGCTTGTCTTC
rJMCP009C11+          AAGTTGCTAGCTAAGCTACTCAAATACACTGAACCaTGGAgtaGAAACTAGCTTGTCTTC
rJMCP001G10+          AAGTTGCCAGCTAAGCTACTCAAATACACTGAACCTTGGACATGAAACTAGCTTGTCTTC
JMCP009C09+           AAGTTGCTAGCTAAGCTACTCAAATACACTGAACCTTGGACATGAAACTAGCTTGTCTTC
JMCP018F01+           AAGTTGCTAGCTAAGCTACTCAAATACACTGAACCTTGGACATGAAACTAGCTTGTCTTC
JMCP005H08+           AAGTTGCTAGCTAAGCTACTCAAATACACTGAACCTTGGACATGAAACTAGCTTGTCTTC
JMCP020F01+           AAGTTGCTAGCTAAGCTACTCAAATACACTGAACCTTGGACATGAAACTAGCTTGTCTTC
rJMCP002C11+          AAGTTGCTAGCTAAGCTACTCAAATACACTGAACCTTGGACATGAAACTAGCTTGTCTTC
JMCP017E05+           AAGTTGCTAGCTAAGCTACTCAAATACACTGAACCTTGGACATGAAACTAGCTTGTCTTC
rJMCP006D05+          AAGTTGCTAGCTAAGCTACTCAAATACACTGAACCTTGGACATGAAACTAGCTTGTCTTC
JMCP005E11+           AAGTTGCTAGCTAAGCTACTCAAATACACTGAACCTTGGACATGAAACTAGCTTGTCTTC
rJMCP010D02+          AAGTTGCTAGCTAAGCTACTCAAATACACTGAACCTTGGACATGAAACTAGCTTGTCTTC
JMCP005C02+           AAGTTGCTAGCTAAGCTACTCAAATACACTGAACCTTGGACATGAAACTAGCTTGTCTTC
rJMCP001B12+          AAGTTGCTAGCTAAGCTACTCAAATACACTGAACCTTGGACATGAAACTAGCTTGTCTTC
JMCP009D04+           AAGTTGCTAcgTAAGCTACTCAAATACACTGAACCTTGGACATGAAACTAGCTTGTCTTC
                      ____________________________________________________________
consensus             AAGTTGCTAGCTAAGCTACTCAAATACACTGAACCTTGGACATGAAACTAGCTTGTCTTC
 
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JMCP001F07+           TCGCTTATTACCTGTTACAATTGGTAGAGTTgttATCATACggaTCCTCGCACTTTCCTT
JMCP001E07+           TCGCTTATTACCTGTTACAATTGGTAGAGTTCAAATCATACCCTTCCTCGCACTTTCCTT
JMCP017H06+           TCGCTTATTACCTGTTACAATTGGTAGAGTTCAAATCATACCCTTCCTCGCACTTTCCTT
rJMCP019F11+          TCGCTTATTACCTGTTACAATTGGTAGAGTTCAAATCATACCCTTCCTCGCACTTTCCTT
rJMCP009C11+          TCGCTTATTACCTGTTAgttTTGGTAGAGTTCAAATCATACCCTTCCTCGCACTTTCCTT
rJMCP001G10+          TCGCTTATTACCTGTTACAATTGGTAGAGTTCAAATCATACCCTTCCTCGCACTTTCCTT
JMCP009C09+           TCGCTTATTACCTGTTACAATTGGTAGAGTTCAAATCATACCCTTCCTCGCACTTTCCTT
JMCP018F01+           TCGCTTATTACCTGTTACAATTGGTAGAGTTCAAATCATACCCTTCCTCGCACTTTCCTT
JMCP005H08+           TCGCTTATTACCTGTTAgttTTGGTAGAGTTCAAATCATACCCTTCCTCGCACTTTCCTT
JMCP020F01+           TCGCTTATTACCTGTTACAATTGGTAGAGTTCAAATCATACCCTTCCTCGCACTTTCCTT
rJMCP002C11+          TCGCTTATTACCTGTTACAATTGGTAGAGTTCAAATCATACCCTTCCTCGCACTTTCCTT
JMCP017E05+           TCGCTTATTACCTGTTACAATTGGTAGAGTTCAAATCATACCCTTCCTCGCACTTTCCTT
rJMCP006D05+          TCGCTTATTACCTGTTAgttTTGGTAGAGTTCAAATCATACCCTTCCTCGCACTTTCCTT
JMCP005E11+           TCGCTTATTACCTGTTACAtTTGGTAGAGTTCAAATCATACCCTTCCTCGCACTTTCCTT
rJMCP010D02+          TCGCTTATTACCTGTTACAATTGGTAGAGTTCAAATCATACCCTTCCTCGCACTTTCCTT
JMCP005C02+           TCGCTTATTACCTGTTACAATTGGTAGAGTTCAAATCATACCCTTCCTCGCACTTTCCTT
rJMCP001B12+          TCGCTTATTACCTGTTACAATAGGTAGAGTTCAAATCATACCCTTCCTCGCACTTCCCTT
JMCP009D04+           TCGCTTATTAggaGTTACAtaaGGTAGAGTTCAAATCATACCCTTCCTCGCACTTTCgaa
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consensus             TCGCTTATTACCTGTTACAATTGGTAGAGTTCAAATCATACCCTTCCTCGCACTTTCCTT