Contig 001508:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019D08Sequence567003919 (15)emb|CDP13052.1|2e-88unnamed protein product [Coffea canephora]743001508 (3)ref|XP_010096960.1|1e-143ABC transporter B family member 10 [Morus notabilis] gb|EXB66537.1| ABC transpor
JMSF047C13Sequence682003919 (15)emb|CDP13052.1|1e-54unnamed protein product [Coffea canephora]761001508 (3)ref|XP_010096960.1|4e-144ABC transporter B family member 10 [Morus notabilis] gb|EXB66537.1| ABC transpor
JMSF052C15Sequence672003919 (15)emb|CDP13052.1|4e-52unnamed protein product [Coffea canephora]896001508 (3)ref|XP_010096960.1|2e-171ABC transporter B family member 10 [Morus notabilis] gb|EXB66537.1| ABC transpor

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052C15+              CCAAATGGTGGCATCCGTGTTTGAAGTACTAGATCGCAAGACAGAGATCTTAGCTG
                      ____________________________________________________________
consensus                 CCAAATGGTGGCATCCGTGTTTGAAGTACTAGATCGCAAGACAGAGATCTTAGCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052C15+          ATGTGGGGGAGGAGTTGATAAAAGTGGAAGGCACAATTGAGCTCAGGGATGTGGAGTTTA
                      ____________________________________________________________
consensus             ATGTGGGGGAGGAGTTGATAAAAGTGGAAGGCACAATTGAGCTCAGGGATGTGGAGTTTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF047C13+                             TACTCCGATTTTCAAAGATTTCAACATGAGAGTGCGCCCGG
rJMFF019D08+                                       TTCAAAGATTTCAACATGAGAGTGCGCCCGG
rJMSF052C15+          GCTACCCTTCCCGGCCTGATACTCCGATTTTCAAAGATTTCAACATGAGAGTGCGCCCGG
                      ____________________________________________________________
consensus             GCTACCCTTCCCGGCCTGATACTCCGATTTTCAAAGATTTCAACATGAGAGTGCGCCCGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF047C13+          GCAAGAGCATGGCGTTAGTCGGGCAGAGTGGTTCTGGTAAAAGTTCGGTTATCTCTCTCA
rJMFF019D08+          GCAAGAGCATGGCGTTAGTCGGGCAGAGTGGTTCTGGTAAAAGTTCGGTTATCTCTCTCA
rJMSF052C15+          GCAAGAGCATGGCGTTAGTCGGGCAGAGTGGTTCTGGTAAAAGTTCGGTTATCTCTCTCA
                      ____________________________________________________________
consensus             GCAAGAGCATGGCGTTAGTCGGGCAGAGTGGTTCTGGTAAAAGTTCGGTTATCTCTCTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF047C13+          TTTTGAGGTTTTATGATCCAATATCCGGGAAAGTCATGATTGATGGTAAAGATATCAAGA
rJMFF019D08+          TTTTGAGGTTTTATGATCCAATATCCGGGAAAGTCATGATTGATGGTAAAGATATCAAGA
rJMSF052C15+          TTTTGAGGTTTTATGATCCAATATCCGGGAAAGTCATGATTGATGGTAAAGATATCAAGA
                      ____________________________________________________________
consensus             TTTTGAGGTTTTATGATCCAATATCCGGGAAAGTCATGATTGATGGTAAAGATATCAAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF047C13+          ACCTAAAGCTCAAGTCTCTAAGGAAGCACATTGGACTTGTCCAACAAGAACCTGCCCTTT
rJMFF019D08+          ACCTAAAGCTCAAGTCTCTAAGGAAGCACATTGGACTTGTCCAACAAGAACCTGCCCTTT
rJMSF052C15+          ACCTAAAGCTCAAGTCTCTAAGGAAGCACATTGGACTTGTCCAACAAGAACCTGCCCTTT
                      ____________________________________________________________
consensus             ACCTAAAGCTCAAGTCTCTAAGGAAGCACATTGGACTTGTCCAACAAGAACCTGCCCTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF047C13+          TCGCCACATCGATCTACGAAAACATCCTCTATGGCAAAGAGGGAGCAACCGAGTCAGAAG
rJMFF019D08+          TCGCCACATCGATCTACGAAAACATCCTCTATGGCAAAGAGGGAGCAACCGAGTCAGAAG
rJMSF052C15+          TCGCCACATCGATCTACGAAAACATCCTCTATGGCAAAGAGGGAGCAACCGAGTCAGAAG
                      ____________________________________________________________
consensus             TCGCCACATCGATCTACGAAAACATCCTCTATGGCAAAGAGGGAGCAACCGAGTCAGAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF047C13+          TGATAGAAGCCGCAAAGCTAGCCAATGCGCATAGTTTCATTAGTGCTCTCCCCGAGGGCT
rJMFF019D08+          TGATAGAAGCCGCAAAGCTAGCCAATGCGCATAGTTTCATTAGTGCTCTCCCCGAGGGCT
rJMSF052C15+          TGATAGAAGCCGCAAAGCTAGCCAATGCGCATAGTTTCATTAGTGCTCTCCCCGAGGGCT
                      ____________________________________________________________
consensus             TGATAGAAGCCGCAAAGCTAGCCAATGCGCATAGTTTCATTAGTGCTCTCCCCGAGGGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF047C13+          ACTCGACCAAGGTAGGAGAGCGAGGCGTGCAGCTTTCTGGCGGGCAGAAGCAGCGAGTAG
rJMFF019D08+          ACTCGACCAAGGTAGGAGAGCGAGGCGTGCAGCTTTCTGGCGGGCAGAAGCAGCGAGTAG
rJMSF052C15+          ACTCGACCAAGGTAGGAGAGCGAGGCGTGCAGCTTTCTGGCGGGCAGAAGCAGCGAGTAG
                      ____________________________________________________________
consensus             ACTCGACCAAGGTAGGAGAGCGAGGCGTGCAGCTTTCTGGCGGGCAGAAGCAGCGAGTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF047C13+          CCATAGCCCGAGCCGTCCTAAAGAACCCCGAAATCTTGCTATTGGACGAAGCCACTAGTG
rJMFF019D08+          CCATAGCCCGAGCCGTCCTAAAGAACCCCGAAATCTTGCTATTGGACGAAGCCACTAGTG
rJMSF052C15+          CCATAGCCCGAGCCGTCCTAAAGAACCCCGAAATCTTGCTATTGGACGAAGCCACTAGTG
                      ____________________________________________________________
consensus             CCATAGCCCGAGCCGTCCTAAAGAACCCCGAAATCTTGCTATTGGACGAAGCCACTAGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF047C13+          CACTCGACGTCGAGTCAGAGCGAATCGTCCAACAAGCTCTCGACAGGCTGATGAAGAGCA
rJMFF019D08+          CACTCGACGTCGAGTCAGAGCGAATCGTCCAACAAGCTCTCGACAGGCTGATGAAGAGCA
rJMSF052C15+          CACTCGACGTCGAGTCAGAGCGAATCGTCCAACAAGCTCTCGACAGGCTGATGAAGAGCA
                      ____________________________________________________________
consensus             CACTCGACGTCGAGTCAGAGCGAATCGTCCAACAAGCTCTCGACAGGCTGATGAAGAGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF047C13+          GAACATCTGTTGTTGTGGCACATAGATTATCTACCATAAAAAATGCTGACCAAATATGTG
rJMFF019D08+          GAACATCTGTTGTTGTGGCACATAGATTATCTACCATAAAAAATGCTGACCAAATATGTG
rJMSF052C15+          GAACATCTGTTGTTGTGGCACATAGATTATCTACCATAAAAAATGCTGACCAAATATGTG
                      ____________________________________________________________
consensus             GAACATCTGTTGTTGTGGCACATAGATTATCTACCATAAAAAATGCTGACCAAATATGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF047C13+          TGTTACAAGATGGGAAGATAATAGAGCAGGGGACTCATTCTACACTCATAGAGAACAGGG
rJMFF019D08+          TGTTACAAGATGGGAAGATAATAGAGCAGGGGACTCATTCTACACTCATAGAGAACAGGG
rJMSF052C15+          TGTTACAAGATGGGAAGATAATAGAGCAGGGGACTCATTCTACACTCATAGAGAACAGGG
                      ____________________________________________________________
consensus             TGTTACAAGATGGGAAGATAATAGAGCAGGGGACTCATTCTACACTCATAGAGAACAGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF047C13+          ATGGAGCATATTATAAGCTCATTAACTTACAGCAGCATCAACAACAATGTTAGAAGTTAT
rJMFF019D08+          ATGGAGCATATTATAAGCTCATTAACTTACAGCAGCATCAACAACAATGTTAGAAGTTAT
rJMSF052C15+          ATGGAGCATATTATAAGCTCATTAACTTACAGCAGCATCAACAACAATGTTAGAAGTTAT
                      ____________________________________________________________
consensus             ATGGAGCATATTATAAGCTCATTAACTTACAGCAGCATCAACAACAATGTTAGAAGTTAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF047C13+          TTGGGAATTGGGATGCATAATTCAATGTATATCCTCTCCATAAAAATATAAT        
rJMFF019D08+          TTGGGAATTGGGATGCATAATTCAATGTATATCCTCTCCATAAAAATATAAT        
rJMSF052C15+          TTGGGAATTGGGATGCATAATTCAATGTATATCCTCTCCATAAAAATATAATTAAATTTT
                      ____________________________________________________________
consensus             TTGGGAATTGGGATGCATAATTCAATGTATATCCTCTCCATAAAAATATAATTAAATTTT