| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF013O04 | Sequence | 455 | 001505 (6) | ref|XP_009792890.1| | 5e-48 | PREDICTED: vesicle-associated protein 1-2-like [Nicotiana sylvestris] | 703 | 001505 (6) | ref|XP_009792890.1| | 5e-49 | PREDICTED: vesicle-associated protein 1-2-like [Nicotiana sylvestris] |
| JMSF033M05 | Sequence | 642 | 001505 (6) | ref|XP_009792890.1| | 5e-64 | PREDICTED: vesicle-associated protein 1-2-like [Nicotiana sylvestris] | 695 | 001505 (6) | ref|XP_009792890.1| | 4e-44 | PREDICTED: vesicle-associated protein 1-2-like [Nicotiana sylvestris] |
| JMSF051I03 | Sequence | 635 | 001505 (6) | ref|XP_009792890.1| | 4e-59 | PREDICTED: vesicle-associated protein 1-2-like [Nicotiana sylvestris] | 717 | 001505 (6) | ref|XP_009792890.1| | 5e-50 | PREDICTED: vesicle-associated protein 1-2-like [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMSF013O04- GGTTGTTGTTATTGACATCCAGGAATCTCGCCATCGGAATCTTTGAATTACACAGAA
JMSF051I03- GGTTGTTGTTATTGACATCCAGGAATCTCGCCATCGGAATCTTTGAATTACACAGAA
JMSF033M05- ATCTTTGAATTACACAGAA
____________________________________________________________
consensus GGTTGTTGTTATTGACATCCAGGAATCTCGCCATCGGAATCTTTGAATTACACAGAA
. : . : . : . : . : . :
JMSF013O04- AAATTCCCCGTTCTTTCCCTCTATTTATTCTGATCTAAAATCACCATAAACCCTTTCACC
JMSF051I03- AAATTCCCCGTTCTTTCCCTCTATTTATTCTGATCTAAAATCACCATAAACCCTTTCACC
JMSF033M05- AAATTCCCCGTTCTTTCCCTCTATTTATTCTGATCTAAAATCACCATAAACCCTTTCACC
____________________________________________________________
consensus AAATTCCCCGTTCTTTCCCTCTATTTATTCTGATCTAAAATCACCATAAACCCTTTCACC
. : . : . : . : . : . :
JMSF013O04- AAATCGACCAATTTCTCCGCCTTTGACTTGTAGGATGAGTGCTGAGGAGCTGTTGATCAT
JMSF051I03- AAATCGACCAATTTCTCCGCCTTTGACTTGTAGGATGAGTGCTGAGGAGCTGTTGATCAT
JMSF033M05- AAATCGACCAATTTCTCCGCCTTTGACTTGTAGGATGAGTGCTGAGGAGCTGTTGATCAT
____________________________________________________________
consensus AAATCGACCAATTTCTCCGCCTTTGACTTGTAGGATGAGTGCTGAGGAGCTGTTGATCAT
. : . : . : . : . : . :
JMSF013O04- CGATCCCCTCGAGCTCAGATTCCCATTTGAGCTTAGGAAACCAATCCCATGCTCTTTTGA
JMSF051I03- CGATCCCCTCGAGCTCAGATTCCCATTTGAGCTTAGGAAACCAATCCCATGCTCTTTTGA
JMSF033M05- CGATCCCCTCGAGCTCAGATTCCCATTTGAGCTTAGGAAACCAATCCCATGCTCTTTTGA
rJMSF033M05+ TTTGA
____________________________________________________________
consensus CGATCCCCTCGAGCTCAGATTCCCATTTGAGCTTAGGAAACCAATCCCATGCTCTTTTGA
. : . : . : . : . : . :
JMSF013O04- GCTGCTCAACAAAACGGATTCTCACGCTGC-TTTCAAGGTTAAAACAACAAATCCGAGAA
JMSF051I03- GCTGCTCAACAAAACGGATTCTCACGCTGC-TTTCAAGGTTAAAACAACAAATCCGAGAA
JMSF033M05- GCTGCTCAACAAAACGGATTCTCACGCTGC-TTTCAAGGTTAAAACAACAAATCCGAGAA
rJMSF033M05+ GCTGCTCANCAAAACGGATTCTCACGCTGCNTTTCAAGGTTAAAACAACAAATCCGAGAA
rJMSF013O04+ TCAACAAAACGGATTCTCACGCTGC-TTTCAAGGTTAAAACAACAAATCCGAGAA
rJMSF051I03+ CTGCTCAACAAAACGGATTCTCACGCTGC-TTTCAAGGTTAAAACAACAAATCCGAGAA
____________________________________________________________
consensus GCTGCTCAACAAAACGGATTCTCACGCTGC-TTTCAAGGTTAAAACAACAAATCCGAGAA
. : . : . : . : . : . :
JMSF013O04- AGTATACTGTTAGGCCGAACAGTGGCGTTGTCCCCCCTAGATCAAGGTGTAATGTTACAG
JMSF051I03- AGTATACTGTTAGGCCGAACAGTGGCGTTGTCCCCCCTAGATCAAGGTGTAATGTTACAG
JMSF033M05- AGTATACTGTTAGGCCGAACAGTGGCGTTGTCCCCCCTAGATCAAGGTGTAATGTTACAG
rJMSF033M05+ AGTATACTGTTAGGCCGAACAGTGGCGTTGTCCCCCCTAGATCAAGGTGTAATGTTACAG
rJMSF013O04+ AGTATACTGTTAGGCCGAACAGTGGCGTTGTCCCCCCTAGATCAAGGTGTAATGTTACAG
rJMSF051I03+ AGTATACTGTTAGGCCGAACAGTGGCGTTGTCCCCCCTAGATCAAGGTGTAATGTTACAG
____________________________________________________________
consensus AGTATACTGTTAGGCCGAACAGTGGCGTTGTCCCCCCTAGATCAAGGTGTAATGTTACAG
. : . : . : . : . : . :
JMSF013O04- TTACAATGCAACCTCAGAGTGAGGCACCTCTTGATATGCAATGCAAAGACAAGTTCCTCA
JMSF051I03- TTACAATGCAACCTCAGAGTGAGGCACCTCTTGATATGCAATGCAAAGACAAGTTCCTCA
JMSF033M05- TTACAATGCAACCTCAGAGTGAGGCACCTCTTGATATGCAATGCAAAGACAAGTTCCTCA
rJMSF033M05+ TTACAATGCAACCTCAGAGTGAGGCACCTCTTGATATGCAATGCAAAGACAAGTTCCTCA
rJMSF013O04+ TTACAATGCAACCTCAGAGTGAGGCACCTCTTGATATGCAATGCAAAGACAAGTTCCTCA
rJMSF051I03+ TTACAATGCAACCTCAGAGTGAGGCACCTCTTGATATGCAATGCAAAGACAAGTTCCTCA
____________________________________________________________
consensus TTACAATGCAACCTCAGAGTGAGGCACCTCTTGATATGCAATGCAAAGACAAGTTCCTCA
. : . : . : . : . : . :
JMSF013O04- TACAGTGTGTGAGTACTCACCCTGGTGTTACACCTAAAG
JMSF051I03- TACAGTGTGTGAGTACTCACCCTGGTGTTACACCTAAAGATATCTCCCAAGAAATGTTTA
JMSF033M05- TACAGTGTGTGAGTACTCACCCTGGTGTTACACCTAAAGATATCTCCCAAGAAATGTTTA
rJMSF033M05+ TACAGTGTGTGAGTACTCACCCTGGTGTTACACCTAAAGATATCTCCCAAGAAATGTTTA
rJMSF013O04+ TACAGTGTGTGAGTACTCACCCTGGTGTTACACCTAAAGATATCTCCCAAGAAATGTTTA
rJMSF051I03+ TACAGTGTGTGAGTACTCACCCTGGTGTTACACCTAAAGATATCTCCCAAGAAATGTTTA
____________________________________________________________
consensus TACAGTGTGTGAGTACTCACCCTGGTGTTACACCTAAAGATATCTCCCAAGAAATGTTTA
. : . : . : . : . : . :
JMSF051I03- ATAAGGAGGTCGGGAAGCATGTCCAGGAGTGCAAGTTGAAAGTTGTTTACGTTTCACCAC
JMSF033M05- ATAAGGAGGTCGGGAAGCATGTCCAGGAGTGCAAGTTGAAAGTTGTTTACGTTTCACCAC
rJMSF033M05+ ATAAGGAGGTCGGGAAGCATGTCCAGGAGTGCAAGTTGAAAGTTGTTTACGTTTCACCAC
rJMSF013O04+ ATAAGGAGGTCGGGAAGCATGTCCAGGAGTGCAAGTTGAAAGTTGTTTACGTTTCACCAC
rJMSF051I03+ ATAAGGAGGTCGGGAAGCATGTCCAGGAGTGCAAGTTGAAAGTTGTTTACGTTTCACCAC
____________________________________________________________
consensus ATAAGGAGGTCGGGAAGCATGTCCAGGAGTGCAAGTTGAAAGTTGTTTACGTTTCACCAC
. : . : . : . : . : . :
JMSF051I03- CAAGACCGCCATCTCCAGTTCCAGAAGAACCTGAAGAAGTGCATTCACCTAGGGCTTCTA
JMSF033M05- CAAGACCGCCATCTCCAGTTCCAGAAGAACCTGAAGAAGTGCATTCACCTAGGGCTTCTA
rJMSF033M05+ CAAGACCGCCATCTCCAGTTCCAGAAGAACCTGAAGAAGTGCATTCACCTAGGGCTTCTA
rJMSF013O04+ CAAGACCGCCATCTCCAGTTCCAGAAGAACCTGAAGAAGTGCATTCACCTAGGGCTTCTA
rJMSF051I03+ CAAGACCGCCATCTCCAGTTCCAGAAGAACCTGAAGAAGTGCATTCACCTAGGGCTTCTA
____________________________________________________________
consensus CAAGACCGCCATCTCCAGTTCCAGAAGAACCTGAAGAAGTGCATTCACCTAGGGCTTCTA
. : . : . : . : . : . :
JMSF051I03- GAACCGAAATGGTGAATCAGGATGAGAATTCTGCTCCCA
JMSF033M05- GAACCGAAATGGTGAATCAGGATGAGAATTCTGCTCCCAGGGATCAAATTGTGAAATTAA
rJMSF033M05+ GAACCGAAATGGTGAATCAGGATGAGAATTCTGCTCCCAGGGATCAAATTGTGAAATTAA
rJMSF013O04+ GAACCGAAATGGTGAATCAGGATGAGAATTCTGCTCCCAGGGATCAAATTGTGAAATTAA
rJMSF051I03+ GAACCGAAATGGTGAATCAGGATGAGAATTCTGCTCCCAGGGATCAAATTGTGAAATTAA
____________________________________________________________
consensus GAACCGAAATGGTGAATCAGGATGAGAATTCTGCTCCCAGGGATCAAATTGTGAAATTAA
. : . : . : . : . : . :
JMSF033M05- TGGAGGAGAGAGATGCCATTATT
rJMSF033M05+ TGGAGGAGAGAGATGCCATTATTCAACAAAATGGAAAACTGCGTCGAGAGTTGGAGTATT
rJMSF013O04+ TGGAGGAGAGAGATGCCATTATTCAACAAAATGGAAAACTGCGTCGAGAGTTGGAGTATT
rJMSF051I03+ TGGAGGAGAGAGATGCCATTATTCAACAAAATGGAAAACTGCGTCGAGAGTTGGAGTATT
____________________________________________________________
consensus TGGAGGAGAGAGATGCCATTATTCAACAAAATGGAAAACTGCGTCGAGAGTTGGAGTATT
. : . : . : . : . : . :
rJMSF033M05+ TGCGACGAGGAGGTTCACAAAAGCATGCCGGAGTTCCCCTGCTCTATGTTTTGCTTATAG
rJMSF013O04+ TGCGACGAGGAGGTTCACAAAAGCATGCCGGAGTTCCCCTGCTCTATGTTTTGCTTATAG
rJMSF051I03+ TGCGACGAGGAGGTTCACAAAAGCATGCCGGAGTTCCCCTGCTCTATGTTTTGCTTATAG
____________________________________________________________
consensus TGCGACGAGGAGGTTCACAAAAGCATGCCGGAGTTCCCCTGCTCTATGTTTTGCTTATAG
. : . : . : . : . : . :
rJMSF033M05+ GCTTGATTGGTATTGTTATGGGGTACCTTTTCAGAAAGTCATGATCAAGCCCAAAGATGA
rJMSF013O04+ GCTTGATTGGTATTGTTATGGGGTACCTTTTCAGAAAGTCATGATCAAGCCCAAAGATGA
rJMSF051I03+ GCTTGATTGGTATTGTTATGGGGTACCTTTTCAGAAAGTCATGATCAAGCCCAAAGATGA
____________________________________________________________
consensus GCTTGATTGGTATTGTTATGGGGTACCTTTTCAGAAAGTCATGATCAAGCCCAAAGATGA
. : . : . : . : . : . :
rJMSF033M05+ GGTTTTGCAATGGATTGGAGAGCAAGTTTTTTAGTTAAGAAATGAGAGATTTACTTGGTT
rJMSF013O04+ GGTTTTGCAATGGATTGGAGAGCAAGTTTTTTAGTTAAGAAATGAGAGATTTACTTGGTT
rJMSF051I03+ GGTTTTGCAATGGATTGGAGAGCAAGTTTTTTAGTTAAGAAATGAGAGATTTACTTGGTT
____________________________________________________________
consensus GGTTTTGCAATGGATTGGAGAGCAAGTTTTTTAGTTAAGAAATGAGAGATTTACTTGGTT
. : . : . : . : . : . :
rJMSF033M05+ TTAACCTGATAC
rJMSF013O04+ TTAACCTGATACCTTTGGGGGTTTCCCCCTTGTTAGTAAACTGTACATC
rJMSF051I03+ TTAACCTGATA-CTTTGGGGGTTTCCCCCTTGTTAGTAAACTGTACATCTATAAATCAAG
____________________________________________________________
consensus TTAACCTGATACCTTTGGGGGTTTCCCCCTTGTTAGTAAACTGTACATCTATAAATCAAG