Contig 001504:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF019N01Sequence222009006 (15)769001504 (3)gb|ADD91581.1|1e-100calcium ATPase [Nicotiana benthamiana]
JMSF022I14Sequence637016769ref|XP_006352690.1|142PREDICTED: uncharacterized protein LOC102597970 [Solanum tuberosum]571001504 (3)gb|ADD91581.1|5e-54calcium ATPase [Nicotiana benthamiana]
JMSF051H02Sequence266009006 (15)ref|XP_009800953.1|4e-19PREDICTED: putative calcium-transporting ATPase 11, plasma membrane-type [Nicot330001504 (3)

Alignment

This contig is upended


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rJMSF019N01+                                                                   TAA
                      ____________________________________________________________
consensus                                                                      TAA
 
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rJMSF019N01+          TGGATACATTAGGTGCACTTGCATTGGCCACAGAACCACCCCATGAGGGACTGATGAATA
                      ____________________________________________________________
consensus             TGGATACATTAGGTGCACTTGCATTGGCCACAGAACCACCCCATGAGGGACTGATGAATA
 
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rJMSF019N01+          GGCCTCCAGTTGGAAGGGATGTAAGTTTCATCACAAAAGCCATGTGGAGAAACATTATTG
                      ____________________________________________________________
consensus             GGCCTCCAGTTGGAAGGGATGTAAGTTTCATCACAAAAGCCATGTGGAGAAACATTATTG
 
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rJMSF019N01+          GCCAAAGTATTTATCAGCTTGCTATCCTTCTAGTCTTCAATTTCTATGGCATTCAAGTTT
                      ____________________________________________________________
consensus             GCCAAAGTATTTATCAGCTTGCTATCCTTCTAGTCTTCAATTTCTATGGCATTCAAGTTT
 
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rJMSF022I14+                   AAGGTTCAGATGCCCATGCAGTTCTCAATACTTTCATATTCAATACCTTNG
rJMSF019N01+          TGAGACTTGAAGGTTCAGATGCCCATGCAGTTCTCAATACTTTCATATTCAATACCTTTG
                      ____________________________________________________________
consensus             TGAGACTTGAAGGTTCAGATGCCCATGCAGTTCTCAATACTTTCATATTCAATACCTTTG
 
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rJMSF022I14+          NGTTCTGTCAGCTCTTCAANGAAGTAAATAGCCGAGACATTGAAAAGTTGAATGTGTTCC
rJMSF019N01+          TGTTCTGTCAGCTCTTCAATGAAGTAAATAGCCGAGACATTGAAAAGTTGAATGTGTTCC
                      ____________________________________________________________
consensus             TGTTCTGTCAGCTCTTCAATGAAGTAAATAGCCGAGACATTGAAAAGTTGAATGTGTTCC
 
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rJMSF022I14+          GCGGCCTATTTGGAAGCTGGATATTCCTAGGCGTCGTGACTTGTACTACAGTTTTCCAGN
rJMSF019N01+          GCGGCCTATTTGGAAGCTGGATATTCCTAGGCGTCGTGACTTGTACTACAGTTTTCCAGG
                      ____________________________________________________________
consensus             GCGGCCTATTTGGAAGCTGGATATTCCTAGGCGTCGTGACTTGTACTACAGTTTTCCAGG
 
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rJMSF022I14+          CCATCATCGTCGAGTTCCTGGGCACGTTCGCAAGCACTGNGCCACTGAGCTGGCAACTTT
rJMSF019N01+          CCATCATCGTCGAGTTCCTGGGCACGTTCGCAAGCACTGTGCCACTGAGCTGGCAACTTT
                      ____________________________________________________________
consensus             CCATCATCGTCGAGTTCCTGGGCACGTTCGCAAGCACTGTGCCACTGAGCTGGCAACTTT
 
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rJMSF022I14+          GGGTGCTCAGCGTCTTGATTGGAGCCGCGGGCATGATCATTTCCATAGTTNTGAAGTTGA
rJMSF019N01+          GGGTGCTCAGCGTCTTGATTGGAGCCGCGGGCATGATCATTTCCATAGTTCTGAAGTTGA
                      ____________________________________________________________
consensus             GGGTGCTCAGCGTCTTGATTGGAGCCGCGGGCATGATCATTTCCATAGTTCTGAAGTTGA
 
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rJMSF022I14+          TTCCCGTCAAAAAAGAGGCTGCCAAGCACCACAATGGTTATGACCTACTGCCCGGCGGTC
rJMSF019N01+          TTCCCGTCAAAAAAGAGGCTGCCAAGCACCACAATGGTTATGACCTACTGCCCGGCGGTC
                      ____________________________________________________________
consensus             TTCCCGTCAAAAAAGAGGCTGCCAAGCACCACAATGGTTATGACCTACTGCCCGGCGGTC
 
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rJMSF022I14+          CAGACCAGGCTTGAGAAGTGAGAGGATAAAGACAGGCATGAGCTTGGCCGGTGGCCCGGA
rJMSF019N01+          CAGACCAGGCTTGAGAAGTGAGAGGATAAAGACAGGCATGAGCTTGGCCGGTGGCCCGGA
                      ____________________________________________________________
consensus             CAGACCAGGCTTGAGAAGTGAGAGGATAAAGACAGGCATGAGCTTGGCCGGTGGCCCGGA
 
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rJMSF022I14+          CGGACAGGCTTGAGAATTCAGAGGATGATAAAGACAAACCAGCGCTGTGGTTGTTTTGTA
rJMSF019N01+          CGGACAGGCTTGAGAATTCAGAGGATGATAAAGACAAACCAGCGCTGTGGTTGTTTTGTA
                      ____________________________________________________________
consensus             CGGACAGGCTTGAGAATTCAGAGGATGATAAAGACAAACCAGCGCTGTGGTTGTTTTGTA
 
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rJMSF022I14+          TTTTTGTTGATCTGCTTTGGCAGTGTCTATATGGCTCAGGAAACGTGTGTGTGAAGCAAA
rJMSF019N01+          TTTTTGTTGATCTGCTTTGGCAGTGTCTATATGGCTCAGGAAACGTGTGTGTGAAGCAAA
rJMSF051H02+                                                         TGTGTGAAGCAAA
                      ____________________________________________________________
consensus             TTTTTGTTGATCTGCTTTGGCAGTGTCTATATGGCTCAGGAAACGTGTGTGTGAAGCAAA
 
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rJMSF022I14+          TTTTGGAGTACAATCAGACTCAGATAT                                 
rJMSF019N01+          TTTTGGAGTACAATCAGACTCAGATATTGGAAGCTAACTAACCGCC              
rJMSF051H02+          TTTTGGAGTACAATCAGACTCAGATATNGGAAGCTAACTAACCGCCCTAAACAAAACAAA
                      ____________________________________________________________
consensus             TTTTGGAGTACAATCAGACTCAGATATTGGAAGCTAACTAACCGCCCTAAACAAAACAAA
 
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rJMSF051H02+          AAAATNGGGTATATCNANGTTTTTCCGTCCNAGTATCCNTTGCTTNTATTGACTGNCCAT
                      ____________________________________________________________
consensus             AAAATNGGGTATATCNANGTTTTTCCGTCCNAGTATCCNTTGCTTNTATTGACTGNCCAT
 
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rJMSF051H02+          GTGACCACGTCCTTGTTTCTGTTTCTGCTTCTCATCGTCGGTTTCTTGAGTAAAACTCTA
                      ____________________________________________________________
consensus             GTGACCACGTCCTTGTTTCTGTTTCTGCTTCTCATCGTCGGTTTCTTGAGTAAAACTCTA
 
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rJMSF051H02+          ATCAACATTAANGTAATAAACACTAGGGTTTNGTCAAATACTTAGCCTCGCTTATCAGTC
                      ____________________________________________________________
consensus             ATCAACATTAANGTAATAAACACTAGGGTTTNGTCAAATACTTAGCCTCGCTTATCAGTC
 
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rJMSF051H02+          AATTTTGGCTTATTTGGCCNCTGTTAGCTGTNNGACNTAANCAATTCGATTAATTAGCTT
                      ____________________________________________________________
consensus             AATTTTGGCTTATTTGGCCNCTGTTAGCTGTNNGACNTAANCAATTCGATTAATTAGCTT