Contig 001503:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF026H19Sequence469001503 (5)ref|XP_004236040.1|2e-36PREDICTED: gibberellin-regulated protein 6 [Solanum lycopersicum]705001503 (5)ref|XP_004236040.1|1e-29PREDICTED: gibberellin-regulated protein 6 [Solanum lycopersicum]
JMFN012L22Sequence615001503 (5)ref|XP_004236040.1|6e-30PREDICTED: gibberellin-regulated protein 6 [Solanum lycopersicum]
JMSF051F07Sequence556001503 (5)emb|CAD10106.1|1e-26Gip1-like protein [Petunia x hybrida]688001503 (5)ref|XP_004236040.1|1e-29PREDICTED: gibberellin-regulated protein 6 [Solanum lycopersicum]

Alignment

This contig is upended


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rJMFF026H19-                            ATTAATAACTAAGACCAAAAGCTGGTCCAACACAACATCAGC
rJMSF051F07-                                             AAAGCTGGTCCAACACAACATCAGC
                      ____________________________________________________________
consensus                               ATTAATAACTAAGACCAAAAGCTGGTCCAACACAACATCAGC
 
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rJMFF026H19-          TCTCATCTTGGGTATTACATATTATTTTTACCCAAAGGAGCCATACAATACAATTAATAC
rJMSF051F07-          TCTCATCTTGGGTATTACATATTATTTTTACCCAAAGGAGCCATACAATACAATTAATAC
                      ____________________________________________________________
consensus             TCTCATCTTGGGTATTACATATTATTTTTACCCAAAGGAGCCATACAATACAATTAATAC
 
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rJMFF026H19-          AAGTGATTAAGGGTCACATCAGAACCAATGACCTGATAATAATAATAATTAAAACAAAAG
rJMSF051F07-          AAGTGATTAAGGGTCACATCAGAACCAATGACCTGATAATAATAATAATTAAAACAAAAG
                      ____________________________________________________________
consensus             AAGTGATTAAGGGTCACATCAGAACCAATGACCTGATAATAATAATAATTAAAACAAAAG
 
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rJMFF026H19-          AAGAACAAAAAGTAAGTAGGAAAACACATATCCAAGCAAATTAAACTGCAACTATAAATT
rJMSF051F07-          AAGAACAAAAAGTAAGTAGGAAAACACATATCCAAGCAAATTAAACTGCAACTATAAATT
                      ____________________________________________________________
consensus             AAGAACAAAAAGTAAGTAGGAAAACACATATCCAAGCAAATTAAACTGCAACTATAAATT
 
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JMFF026H19+                                                                     GG
JMSF051F07+                                                                     GG
rJMFF026H19-          GCATGCATCAAACTAATTGGGGAAATCAATTATTAATTAATGGATTATGGATGATTAGGG
JMFN012L22+                                                                     GG
rJMSF051F07-          GCATGCATCAAACTAATTGGGGAAATCAATTATTAATTAATGGATTATGGATGATTAGGG
                      ____________________________________________________________
consensus             GCATGCATCAAACTAATTGGGGAAATCAATTATTAATTAATGGATTATGGATGATTAGGG
 
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JMFF026H19+           GCATTTGGGTCCTCCTTCCTTGGTCTTCCAGTTGTTGTAGCAAGGGCAAACCCCCTTATT
JMSF051F07+           GCATTTGGGTCCTCCTTCCTTGGTCTTCCAGTTGTTGTAGCAAGGGCAAACCCCCTTATT
rJMFF026H19-          GCATTTGGGTCCTCCTTCCTTGGTCTTCCAGTTGTTGTAGCAAGGGCAAACCCCCTTATT
JMFN012L22+           GCATTTGGGTCCTCCTTCCTTGGTCTTCCAGTTGTTGTAGCAAGGGCAAACCCCCTTATT
rJMSF051F07-          GCATTTGGGTCCTCCTTCCTTGGTCTTCCAGTTGTTGTAGCAAGGGCAAACCCCCTTATT
                      ____________________________________________________________
consensus             GCATTTGGGTCCTCCTTCCTTGGTCTTCCAGTTGTTGTAGCAAGGGCAAACCCCCTTATT
 
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JMFF026H19+           GCCATAGAAACCAGGGGGAACACAAAGGCACTTCTTGCAACACTTNTGGCAAAAGAACAT
JMSF051F07+           GCCATAGAAACCAGGGGGAACACAAAGGCACTTCTTGCAACACTTCTGGCAAAAGAACAN
rJMFF026H19-          GCCATAGAAACCAGGGGGAACACAAAGGCACTTCTTGCAACACTTCTGGCAAAAGAACAT
JMFN012L22+           GCCATAGAAACCAGGGGGAACACAAAGGCACTTCTTGCAACACTTCTGGCAAAAGAACAT
rJMSF051F07-          GCCATAGAAACCAGGGGGAACACAAAGGCACTTCTTGCAACACTTCTGGCAAAAGAACAT
                      ____________________________________________________________
consensus             GCCATAGAAACCAGGGGGAACACAAAGGCACTTCTTGCAACACTTCTGGCAAAAGAACAT
 
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JMFF026H19+           GCATGGCTTGTGGTATTGTGTCTGGCTACATCTCCTTGTGCATTGTGGCAGACACTGTGT
JMSF051F07+           GCATGGCTTGTGGTATTGTGTCTGGCTACATCTCCTTGTGCATTGTGGCAGACACTGTGT
rJMFF026H19-          GCATGGCTTGTGGTATTGTGTCTGGCTACATCTCCTTGTGCATTGTGGCAGACACTGTGT
JMFN012L22+           GCATGGCTTGTGGTATTGTGTCTGGCTACATCTCCTTGTGCATTGTGGCAGACACTGTGT
rJMSF051F07-          GCATGGCTTGTGGTATTGTGTCTGGCTACATCTCCTTGTGCATTGTGGCAGACACTGTGT
                      ____________________________________________________________
consensus             GCATGGCTTGTGGTATTGTGTCTGGCTACATCTCCTTGTGCATTGTGGCAGACACTGTGT
 
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JMFF026H19+           GGGGTTTAAGCTTCCAGGACCATA                                    
JMSF051F07+           GGGGTTTAAGCTTCCAGGACCATA                                    
rJMFF026H19-          GGGGTTTAAGCTTCCAGGACCATAACCTGAACCACCATTGTGGTTCCTGGTCTTTGAAGC
JMFN012L22+           GGGGTTTAAGCTTCCAGGACCATAACCTGAACCACCATTGTGGTTCCTGGTCTTTGAAGC
rJMSF051F07-          GGGGTTTAAGCTTCCAGGACCATAACCTGAACCACCATTGTGGTTCCTGGTCTTTGAAGC
                      ____________________________________________________________
consensus             GGGGTTTAAGCTTCCAGGACCATAACCTGAACCACCATTGTGGTTCCTGGTCTTTGAAGC
 
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rJMFF026H19-          CAGAATAGTGGCAGAAAGCATGGATATAACAAGGATCACCAATACCACCATTGAACCAAG
JMFN012L22+           CAGAATAGTGGCAGAAAGCATGGATATAACAAGGATCACCAATACCACCATTGAACCAAG
rJMSF051F07-          CAGAATAGTGGCAGAAAGCATGGATATAACAAGGATCACCAATACCACCATTGAACCAAG
                      ____________________________________________________________
consensus             CAGAATAGTGGCAGAAAGCATGGATATAACAAGGATCACCAATACCACCATTGAACCAAG
 
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rJMFF026H19-          CTTAGCCATTGCTATTTCTTGCTATATATATGTATATATATATATATAGAGAGAGAGAGA
JMFN012L22+           CTTAGCCATTGCTATTTCTTGCTATATATATGTATATATATATATATAGAGAGAGAGAGA
rJMSF051F07-          CTTAGCCATTGCTATTTCTTGCTATATATATGTATATATATATATATAGAGAGAGAGAGA
                      ____________________________________________________________
consensus             CTTAGCCATTGCTATTTCTTGCTATATATATGTATATATATATATATAGAGAGAGAGAGA
 
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rJMFF026H19-          GAAAGAGAGGGAGAGAGAGAGAGGGGACTGTTTTGAGTGTTTGTGTAAAAAGGTTTGAT 
JMFN012L22+           GAAAGAGAGGGAGAGAGA                                          
rJMSF051F07-          GAAAGAGAGGGAGAGAGAGAGAGGGGACTGTTTTGAGTGTTTGTGTAAAAAGGTTTGATC
                      ____________________________________________________________
consensus             GAAAGAGAGGGAGAGAGAGAGAGGGGACTGTTTTGAGTGTTTGTGTAAAAAGGTTTGATC