Contig 001502:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF027O18Sequence527007400 (4)ref|XP_009796996.1|2e-32PREDICTED: TOM1-like protein 2 [Nicotiana sylvestris] ref|XP_009797003.1| PREDIC708001502 (4)ref|XP_009781390.1|5e-26PREDICTED: TOM1-like protein 2 [Nicotiana sylvestris]
JMSF016G18Sequence489007400 (4)ref|XP_009796996.1|8e-38PREDICTED: TOM1-like protein 2 [Nicotiana sylvestris] ref|XP_009797003.1| PREDIC770001502 (4)emb|CDP11965.1|5e-23unnamed protein product [Coffea canephora]
JMSF043D13Sequence732007400 (4)emb|CDP11965.1|9e-98unnamed protein product [Coffea canephora]783001502 (4)emb|CDP11965.1|2e-29unnamed protein product [Coffea canephora]
JMSF051E18Sequence692007400 (4)emb|CDP11965.1|5e-86unnamed protein product [Coffea canephora]741001502 (4)ref|XP_011102017.1|6e-11PREDICTED: LOW QUALITY PROTEIN: ADP-ribosylation factor-binding protein GGA3 [S

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF043D13+ GGATGAAGAGTCAGAA
                      ____________________________________________________________
consensus GGATGAAGAGTCAGAA
 
. : . : . : . : . : . :
rJMFF027O18+ CTGGGACA
rJMSF043D13+ GATGATTTTGTTCNATTATCCCGCAGATCTACCAAGAGATACATCCCAAGGACTGGGACA
                      ____________________________________________________________
consensus GATGATTTTGTTCNATTATCCCGCAGATCTACCAAGAGATACATCCCAAGGACTGGGACA
 
. : . : . : . : . : . :
rJMFF027O18+ GGGACGTAAGCCCCTTGGCTTGAAAAGTGAGCCAGTGCGGATCAATCCAATTCTTCCTCC
rJMSF043D13+ GGGACGTAAGCCCCTTGGCTTGAAAAGTGAGCCAGTGCGGATCAATCCAATTCTTCCTCC
                      ____________________________________________________________
consensus GGGACGTAAGCCCCTTGGCTTGAAAAGTGAGCCAGTGCGGATCAATCCAATTCTTCCTCC
 
. : . : . : . : . : . :
rJMFF027O18+ ACCACCCTCATCGAGGAATCCAGTTTCTACTGATGCTGGAATGATTGACTATTTAAGTGG
rJMSF043D13+ ACCACCCTCATCGAGGAATCCAGTTTCTACTGATGCTGGAATGATTGACTATTTAAGTGG
rJMSF016G18+ CTGATGCTGGAATGATTGNCTATNTAAGTGG
                      ____________________________________________________________
consensus ACCACCCTCATCGAGGAATCCAGTTTCTACTGATGCTGGAATGATTGACTATTTAAGTGG
 
. : . : . : . : . : . :
rJMFF027O18+ TGAAACATATCAGTCCGAAAGATCGTCTGGACCTTCAGGATCTGCACCAACTGCTGTTTC
rJMSF043D13+ TGAAACATATCAGTCCGAAAGATCGTCTGGACCTTCAGGATCTGCACCAACTGCTGTTTC
rJMSF016G18+ TGAANCATATCAGTCNGAAAGATCGTCTGGACCTTCAGGATCTGCACCAACTGCTGTTTC
rJMSF051E18+ ATCTGCACCAACTGCTGTTTC
                      ____________________________________________________________
consensus TGAAACATATCAGTCCGAAAGATCGTCTGGACCTTCAGGATCTGCACCAACTGCTGTTTC
 
. : . : . : . : . : . :
rJMFF027O18+ TACACATTCAAATGATTCAATCCCTGTCAAATCAAATCCTCCAAAGCTCTCTTCTTCTCC
rJMSF043D13+ TACACATTCAAATGATTCAATCCCTGTCAAATCAAATCCTCCAAAGCTCTCTTCTTCTCC
rJMSF016G18+ TACACATTCAAATGATTCAATCCCTGTCAAATCAAATCCTCCAAAGCTCTCTTCTTCTCC
rJMSF051E18+ TACACATTCAAATGATTCAATCCCTGTCAAATCAAATCCTCCAAAGCTCTCTTCTTCTCC
                      ____________________________________________________________
consensus TACACATTCAAATGATTCAATCCCTGTCAAATCAAATCCTCCAAAGCTCTCTTCTTCTCC
 
. : . : . : . : . : . :
rJMFF027O18+ TCCAGATGATCTCATAAATCCAACGGCAGCCGATGATGATTTCCTTAACCCCACGGCATC
rJMSF043D13+ TCCAGATGATCTCATAAATCCAACGGCAGCCGATGATGATTTCCTTAACCCCACGGCATC
rJMSF016G18+ TCCAGATGATCTCATAAATCCAACGGCAGCCGANGATGATTTCCTTAACCCCACGGCATC
rJMSF051E18+ TCCAGATGATCTCATAAATCCAACGGCAGCCGATGATGATTTCCTTAACCCCACGGCATC
                      ____________________________________________________________
consensus TCCAGATGATCTCATAAATCCAACGGCAGCCGATGATGATTTCCTTAACCCCACGGCATC
 
. : . : . : . : . : . :
rJMFF027O18+ TATGTTTGCTTCAAAGCCCAAATCTGCCGATCATTTACCTCAAGCTCCTTGGGATGCTAC
rJMSF043D13+ TATGTTTGCTTCAAAGCCCAAATCTGCCGATCATTTACCTCAAGCTCCTTGGGATGCTAC
rJMSF016G18+ TATGTTTGCTTCAAAGCCCAAATCTGCCGATCATTTACCTCAAGCTCCTTGGGATGCTAC
rJMSF051E18+ TATGTTTGCTTCAAAGCCCAAATCTGCCGATCATTTACCTCAAGCTCCTTGGGATGCTAC
                      ____________________________________________________________
consensus TATGTTTGCTTCAAAGCCCAAATCTGCCGATCATTTACCTCAAGCTCCTTGGGATGCTAC
 
. : . : . : . : . : . :
rJMFF027O18+ CCCTGCGGGCGCCCTCCCACCACCACCTGCCAAATTTAACCAGAGACAACAATATTTTGA
rJMSF043D13+ CCCTGCGGGCGCCCTCCCACCACCACCTGCCAAATTTAACCAGAGACAACAATATTTTGA
rJMSF016G18+ CCCTGCGGGCGCCCTCCCACCACCNCNTGCCAAATTTAACCAGAGACAACAATATTTTGA
rJMSF051E18+ CCCTGCGGGCGCCCTCCCACCACCACCTGCCAAATTTAACCAGAGACAACAATATTTTGA
                      ____________________________________________________________
consensus CCCTGCGGGCGCCCTCCCACCACCACCTGCCAAATTTAACCAGAGACAACAATATTTTGA
 
. : . : . : . : . : . :
rJMFF027O18+ GCAACAGCATCAATTTCCTGGCAGCCCCTCAAATTCCAGTGCGGGGTCTTACAACAGCTT
rJMSF043D13+ GCAACAGCATCAATTTCCTGGCAGCCCCTCAAATTCCAGTGCGGGGTCTTACAACAGCTT
rJMSF016G18+ GCAACAGCATCAATTTCCTGGCAGCCCCTCAAATTCCAGTGCGGGGTNTTACANCAGNTT
rJMSF051E18+ GCAACAGCATCAATTTCCTGGCAGCCCCTCAAATTCCAGTGCGGGGTCTTACAACAGCTT
                      ____________________________________________________________
consensus GCAACAGCATCAATTTCCTGGCAGCCCCTCAAATTCCAGTGCGGGGTCTTACAACAGCTT
 
. : . : . : . : . : . :
rJMFF027O18+ AGTGGGGCAGACAAAGAATCTGTCGATTAATCCACCAACCCCAACCAAACAAGAAAAAGC
rJMSF043D13+ AGTGGGGCAGACAAAGAATCTGTCGATTAATCCACCAACCCCAACCAAACAAGAAAAAGC
rJMSF016G18+ AGTGGGGCAGACAAAGAATCTGTCGATTAATCCACCAACCCCANCCAAACAAGAAAAAGC
rJMSF051E18+ AGTGGGGCAGACAAAGAATCTGTCGATTAATCCACCAACCCCAACCAAACAAGAAAAAGC
                      ____________________________________________________________
consensus AGTGGGGCAGACAAAGAATCTGTCGATTAATCCACCAACCCCAACCAAACAAGAAAAAGC
 
. : . : . : . : . : . :
rJMFF027O18+ AGAGGATGCGCTCTTCAAAGATCTGGTTGATTTTGCCAAAGCTAAGTCTTCATCATCATC
rJMSF043D13+ AGAGGATGCGCTCTTCAAAGATCTGGTTGATTTTGCCAAAGCTAAGTCTTCATCATCATC
rJMSF016G18+ AGAGGATGCGCTCTTCAAAGATCTGGTTGATTTTGCCAAAGCTAAGTCTTCATCATCATC
rJMSF051E18+ AGAGGATGCGCTCTTCAAAGATCTGGTTGATTTTGCCAAAGCTAAGTCTTCATCATCATC
                      ____________________________________________________________
consensus AGAGGATGCGCTCTTCAAAGATCTGGTTGATTTTGCCAAAGCTAAGTCTTCATCATCATC
 
. : . : . : . : . : . :
rJMFF027O18+ GTCGTCAAAGCCTTCTAGTAATAGATCTCTTTGAGAAACTGTATTAATCATTGGTGTGGT
rJMSF043D13+ GTCGTCAAAGCCTTCTAGTAATAGATCTCTTTGAGAAACTGTATTAATCATTGGTGTGGT
rJMSF016G18+ GTCGTCAAAGCCTTCTAGTAATAGATCTCTNTGAGAAACTGTATTAATCANTGGTGTGGT
rJMSF051E18+ GTCGTCAAAGCCTTCTAGTAATAGATCTCTTTGAGAAACTGTATTAATCATTGGTGTGGT
                      ____________________________________________________________
consensus GTCGTCAAAGCCTTCTAGTAATAGATCTCTTTGAGAAACTGTATTAATCATTGGTGTGGT
 
. : . : . : . : . : . :
rJMFF027O18+ ACAGTTTCCAGTGTTGTTAGTTCTGATCAATATT
rJMSF043D13+ ACAGTTTCCAGTGTTGTTAGTTCTGATCAATATT
rJMSF016G18+ ACAGTTTCCAGTGTTGTTAGTTCTGATCAATATTTCAGACTAATAATTNCAGATTGGAAC
rJMSF051E18+ ACAGTTTCCAGTGTTGTTAGTTCTGATCAATATTTCAGACTAATAATTACAGATTGGAAC
                      ____________________________________________________________
consensus ACAGTTTCCAGTGTTGTTAGTTCTGATCAATATTTCAGACTAATAATTACAGATTGGAAC
 
. : . : . : . : . : . :
rJMSF016G18+ TCAGAGCATTGTTACTATATGTTNTGCTGAAACCGCTCGCTGCCTTCATTTACAGACATT
rJMSF051E18+ TCAGAGCATTGTTACTATATGTTTTGCTGAAACCGCTTGCTGCCTTCATTTACAGACATT
                      ____________________________________________________________
consensus TCAGAGCATTGTTACTATATGTTTTGCTGAAACCGCTTGCTGCCTTCATTTACAGACATT
 
. : . : . : . : . : . :
rJMSF016G18+ GAGTTTGTGAATATCAGTGTTTAGTGTATATCTCTGTGTGTGTGTGTGTACTTGTGGTGC
rJMSF051E18+ GAGTTTGTGAATATCAGTGTTTAGTGTATATCTCTGTGTGTGTGTGTGTACTTGTGGTGC
                      ____________________________________________________________
consensus GAGTTTGTGAATATCAGTGTTTAGTGTATATCTCTGTGTGTGTGTGTGTACTTGTGGTGC
 
. : . : . : . : . : . :
rJMSF016G18+ AAGAATTTCACAAAGT
rJMSF051E18+ AAGAATTTCACAAAGTTCTTTCACTTGTTTTCATATCAGCATATAGATTGTAAACTGTTT
                      ____________________________________________________________
consensus AAGAATTTCACAAAGTTCTTTCACTTGTTTTCATATCAGCATATAGATTGTAAACTGTTT