Contig 001499:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF042F15-                                                            ATGGCAACGT
JMSF042F15+             TTTTTTTTTTGAAAGAAAAGAATTTAATATTTATTCAGCCTTCAATCAATGGCAACGT
JMFN013N04+                             AAAGAATTTAATATTTATTCAGCCTTCAATCAATGGCAACGT
JMSF050O24+                             AAAGAATTTAATATTTATTCAGCCTTCAATCAATGGCAACGT
rJMSF050O24-                                                                  ACGT
                      ____________________________________________________________
consensus               TTTTTTTTTTGAAAGAAAAGAATTTAATATTTATTCAGCCTTCAATCAATGGCAACGT
 
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rJMSF042F15-          AACATACAAATCCAACACAGTCGCTCTATGGGCAATATTAATCCCTTTGTAATCTATCTT
JMSF042F15+           AACATACAAATCCAACACAGTCGCTCTATGGGCAATATTAATCCCTTTGTAATCTATCTT
JMFN013N04+           AACATACAAATCCAACACAGTCGCTCTATGGGCAATATTAATCCCTTTGTAATCTATCTT
JMSF050O24+           AACATACAAATCCAACACAGTCGCTCTATGGGCAATATTAATCCCTTTGTAATCTATCTT
rJMSF050O24-          AACATACAAATCCAACACAGTCGCTCTATGGGCAATATTAATCCCTTTGTAATCTATCTT
                      ____________________________________________________________
consensus             AACATACAAATCCAACACAGTCGCTCTATGGGCAATATTAATCCCTTTGTAATCTATCTT
 
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rJMSF042F15-          ATAGCAGCAAAAAAGCAGAGAAAAGCAGAAGATAATAGATATGAAATGTGGATGGAAGAG
JMSF042F15+           ATAGCAGCAAAAAAGCAGAGAAAAGCAGAAGATAATAGATATGAAATGTGGATGGAAGAG
JMFN013N04+           ATAGCAGCAAAAAAGCAGAGAAAAGCAGAAGATAATAGATATGAAATGTGGATGGAAGAG
JMSF050O24+           ATAGCAGCAAAAAAGCAGAGAAAAGCAGAAGATAATAGATATGAAATGTGGATGGAAGAG
rJMSF050O24-          ATAGCAGCAAAAAAGCAGAGAAAAGCAGAAGATAATAGATATGAAATGTGGATGGAAGAG
                      ____________________________________________________________
consensus             ATAGCAGCAAAAAAGCAGAGAAAAGCAGAAGATAATAGATATGAAATGTGGATGGAAGAG
 
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rJMSF042F15-          GAGCTGATGATGAGGATTTGGTTTTGGGACGAGCAGCGGCAGCTGCTGCAGCAGATCCAC
JMSF042F15+           GAGCTGATGATGAGGATTTGGTTTTGGGACGAGCAGCGGCAGCTGCTGCAGCAGATCCAC
JMFN013N04+           GAGCTGATGATGAGGATTTGGTTTTGGGACGAGCAGCGGAAGCTGCTGCAGCAGATCCAC
JMSF050O24+           GAGCTGATGATGAGGATTTGGTTTTGGGACGAGCAGCGGCAGCTGCTGCAGCAGATCCAC
rJMSF050O24-          GAGCTGATGATGAGGATTTGGTTTTGGGACGAGCAGCGGCAGCTGCTGCAGCAGATCCAC
                      ____________________________________________________________
consensus             GAGCTGATGATGAGGATTTGGTTTTGGGACGAGCAGCGGCAGCTGCTGCAGCAGATCCAC
 
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rJMSF042F15-          CGGCCGACGAGACTGGGATGGTGCGCGCCCTCCTCTTCATCATCTGCAAGCTTAGCTTCT
JMSF042F15+           CGGCCGACGAGACTGGGATGGTGCGCGCCCTCCTCTTCATCATCTGCAAGCTTAGCTTCT
JMFN013N04+           CGGCCGACGAGTCTGGGATGGTGCGCGCCCTCCTCTTCATCACCTGCAAGCTTAGCTTCT
JMSF050O24+           CGGCCGACGAGACTGGGATGGTGCGCGCCCTCCTCTTCATCACCTGCAAGCTTAGCTTCT
rJMSF050O24-          CGGCCGACGAGACTGGGATGGTGCGCGCCCTCCTCTTCATCACCTGCAAGCTTAGCTTCT
                      ____________________________________________________________
consensus             CGGCCGACGAGACTGGGATGGTGCGCGCCCTCCTCTTCATCACCTGCAAGCTTAGCTTCT
 
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rJMSF042F15-          CGGCTACTGGAGAAGATAATATGAATGGTTTGGTTTGAAGAGCAGAAGGCGAAAGGGGTG
JMSF042F15+           CGGCTACTGGAGAAGATAATATGAATGGTTTGGTTTGAAGAGCAGAAGGCGAAAGGGGTG
JMFN013N04+           CGGCTACTGGAGAAGATAATATGAATGGTTTGGTTTGAAGAGCAGAAGGCGAAAGGGGTG
JMSF050O24+           CGGCTACTGGAGAAGATAATATGAATGGTTTGGTTTGAAGAGCAGAAGGCGAAAGGGGTG
rJMSF050O24-          CGGCTACTGGAGAAGATAATATGAATGGTTTGGTTTGAAGAGCAGAAGGCGAAAGGGGTG
                      ____________________________________________________________
consensus             CGGCTACTGGAGAAGATAATATGAATGGTTTGGTTTGAAGAGCAGAAGGCGAAAGGGGTG
 
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rJMSF042F15-          ATGATGATGAATATGAAACCAAAAAGGATAGAGAGAGTAAGAGGAGAGCTATGAAAGCAG
JMSF042F15+           ATGATGATGAATATGAAACCAAAAAGGATAGAGAGAGTAAGAGGAGAGCTATGAAAGCAG
JMFN013N04+           ATGATGATGAATATGAAACCAAAAAGGATAGAGAGAGTAAGAGGAGAGCTATGAAAGCAG
JMSF050O24+           ATGATGATGAATATGAAACCAAAAAGGATAGAGAGAGTAAGAGGAGAGCTATGAAAGCAG
rJMSF050O24-          ATGATGATGAATATGAAACCAAAAAGGATAGAGAGAGTAAGAGGAGAGCTATGAAAGCAG
                      ____________________________________________________________
consensus             ATGATGATGAATATGAAACCAAAAAGGATAGAGAGAGTAAGAGGAGAGCTATGAAAGCAG
 
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rJMSF042F15-          CAGCTATTGCCTTCACTTCAATCATGGCGGCTTAGCTTCCCAGGGTAGGAAGCTAAGGAA
JMSF042F15+           CAGCTATTGCCTTCACTTCAATCATGGCGGCTTAGCTTCCCAGGGTAGGAAGCTAAGGAA
JMFN013N04+           CAGCTATTGCCTTCACTTCAATCATGGCGGCTTAGCTTCCC                   
JMSF050O24+           CAGCTATTGCCTTCACTTCAATCATGGCGGCTTAGCTTCCCAGGGTAGGAAGCTAAGGAA
rJMSF050O24-          CAGCTATTGCCTTCACTTCAATCATGGCGGCTTAGCTTCCCAGGGTAGGAAGCTAAGGAA
                      ____________________________________________________________
consensus             CAGCTATTGCCTTCACTTCAATCATGGCGGCTTAGCTTCCCAGGGTAGGAAGCTAAGGAA
 
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rJMSF042F15-          GAATATAATGAAGC                                              
JMSF042F15+           GAATATAATGAAGC                                              
JMSF050O24+           GAATATAATGAAGCGTGATAGGCAGGCCAAGACGCAATATATGTATATATAATAATAGTC
rJMSF050O24-          GAATATAATGAAGCGTGATAGGCAGGCCAAGACGCAATATATGTATATATAATAATAGTC
                      ____________________________________________________________
consensus             GAATATAATGAAGCGTGATAGGCAGGCCAAGACGCAATATATGTATATATAATAATAGTC