Contig 001498:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF021H20Sequence696005033 (3)ref|XP_009795830.1|2e-86PREDICTED: serine carboxypeptidase-like 18 isoform X1 [Nicotiana sylvestris]775001498 (2)ref|XP_009795831.1|1e-80PREDICTED: serine carboxypeptidase-like 18 isoform X2 [Nicotiana sylvestris]
JMSF050K11Sequence694005033 (3)ref|XP_009795830.1|7e-87PREDICTED: serine carboxypeptidase-like 18 isoform X1 [Nicotiana sylvestris]775001498 (2)ref|XP_009795831.1|7e-80PREDICTED: serine carboxypeptidase-like 18 isoform X2 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF050K11+               CTGCATGTCCATATAATCTGAAAGAGTATCAAAGTGTACTGAAAAGATTTTTCAG
                      ____________________________________________________________
consensus                  CTGCATGTCCATATAATCTGAAAGAGTATCAAAGTGTACTGAAAAGATTTTTCAG
 
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rJMSF050K11+          GCGCAAATTTTAGAACCGGTGTGTAGCGATGAAAGTTTACTGACTCTAGATGTGAGTTCT
                      ____________________________________________________________
consensus             GCGCAAATTTTAGAACCGGTGTGTAGCGATGAAAGTTTACTGACTCTAGATGTGAGTTCT
 
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rJMSF021H20+                       TACCACAACACTGGTGCAGAGAAAATAATTATTTGTTCTCCTCCACC
rJMSF050K11+          GTTGGTGAAAATTTACCACAACACTGGTGCAGAGAAAATAATTATTTGTTCTCCTCCACC
                      ____________________________________________________________
consensus             GTTGGTGAAAATTTACCACAACACTGGTGCAGAGAAAATAATTATTTGTTCTCCTCCACC
 
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rJMSF021H20+          TGGGCAAATAACAAAGTTGTCCAGAAAGCGCTTCACGTGCATGAGGGAACGATAACAGAG
rJMSF050K11+          TGGGCAAATAACAAAGTTGTCCAGAAAGCGCTTCACGTGCATGAGGGAACGATAACAGAG
                      ____________________________________________________________
consensus             TGGGCAAATAACAAAGTTGTCCAGAAAGCGCTTCACGTGCATGAGGGAACGATAACAGAG
 
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rJMSF021H20+          TGGGTTAGATGCAACCAAAGCATGAAAGGTGATACTAATGAGAGAACTGAGGCATACATT
rJMSF050K11+          TGGGTTAGATGCAACCAAAGCATGAAAGGTGATACTAATGAGAGAACTGAGGCATACATT
                      ____________________________________________________________
consensus             TGGGTTAGATGCAACCAAAGCATGAAAGGTGATACTAATGAGAGAACTGAGGCATACATT
 
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rJMSF021H20+          TTTAATGTCCAAAGCACAGTTGATTATCATCGGAGTTTCACCAACAAATCTTGTCGAGTT
rJMSF050K11+          TTTAATGTCCAAAGCACAGTTGATTATCATCGGAGTTTCACCAACAAATCTTGTCGAGTT
                      ____________________________________________________________
consensus             TTTAATGTCCAAAGCACAGTTGATTATCATCGGAGTTTCACCAACAAATCTTGTCGAGTT
 
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rJMSF021H20+          CTAATCTACAGTGGGGATCATGACATGGTTGCACCTCATCTGGGCACAGAAGAATGGATA
rJMSF050K11+          CTAATCTACAGTGGGGATCATGACATGGTTGCACCTCATCTGGGCACAGAAGAATGGATA
                      ____________________________________________________________
consensus             CTAATCTACAGTGGGGATCATGACATGGTTGCACCTCATCTGGGCACAGAAGAATGGATA
 
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rJMSF021H20+          GGGTCCTTACAAGTTGCCGTTGAAGATGATTGGAGACCTTGGTTTGTTGAAGATCAAGTT
rJMSF050K11+          GGGTCCTTACAAGTTGCCGTTGAAGATGATTGGAGACCTTGGTTTGTTGAAGATCAAGTT
                      ____________________________________________________________
consensus             GGGTCCTTACAAGTTGCCGTTGAAGATGATTGGAGACCTTGGTTTGTTGAAGATCAAGTT
 
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rJMSF021H20+          GCAGGATACACCATGAAATATTCACAGAATAACTATGAGTTGACATATGCAACTGTAAAG
rJMSF050K11+          GCAGGATACACCATGAAATATTCACAGAATAACTATGAGTTGACATATGCAACTGTAAAG
                      ____________________________________________________________
consensus             GCAGGATACACCATGAAATATTCACAGAATAACTATGAGTTGACATATGCAACTGTAAAG
 
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rJMSF021H20+          GGAGCAGGTCATACAGCACCAGAGTATAAGCCACAACAATGTCAGTCAATGATTCAGAGA
rJMSF050K11+          GGAGCAGGTCATACAGCACCAGAGTATAAGCCACAACAATGTCAGTCAATGATTCAGAGA
                      ____________________________________________________________
consensus             GGAGCAGGTCATACAGCACCAGAGTATAAGCCACAACAATGTCAGTCAATGATTCAGAGA
 
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rJMSF021H20+          TGGCTTAGCAATTATCCTCTTTGATTAT                                
rJMSF050K11+          TGGCTTAGCAATTATCCTCTTTGATTATGTAATATTGAATGCATACATATTCAATGAATA
                      ____________________________________________________________
consensus             TGGCTTAGCAATTATCCTCTTTGATTATGTAATATTGAATGCATACATATTCAATGAATA
 
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rJMSF050K11+          AAATTGCAATGACCTTTGATATCTTTCTCTGTTAAAAATAAGCCACAACAATGTCAGTCA
                      ____________________________________________________________
consensus             AAATTGCAATGACCTTTGATATCTTTCTCTGTTAAAAATAAGCCACAACAATGTCAGTCA
 
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rJMSF050K11+          ATGATTAAGAGATGGCTTAGCAATTATCCTCTTTGATTATTATGTAATATTGAATGCATA
                      ____________________________________________________________
consensus             ATGATTAAGAGATGGCTTAGCAATTATCCTCTTTGATTATTATGTAATATTGAATGCATA