Contig 001493:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF020P20+                                                 CTCTTCCCTGCTAATGTCACT
                      ____________________________________________________________
consensus                                                    CTCTTCCCTGCTAATGTCACT
 
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rJMSF020P20+          CATGCCACCACTACACCTAAAGGAACACCTGGATATGTTGATCCAGACTATCACGAGTGT
rJMSF049O08+                             AAGGAACACCNGGATATGNTGATCCAGACTATCACGAGTGT
                      ____________________________________________________________
consensus             CATGCCACCACTACACCTAAAGGAACACCTGGATATGTTGATCCAGACTATCACGAGTGT
 
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rJMSF020P20+          TATCAGCTCACTTATAAGAGTGATGTTTATAGCTTCGGGGTCGTTCTTACTGAACTCATA
rJMSF049O08+          TATCAGCTCACTTATAAGAGTGATGTTTATAGCTTCGGGGTCGTTCTTACTGAACTCATA
                      ____________________________________________________________
consensus             TATCAGCTCACTTATAAGAGTGATGTTTATAGCTTCGGGGTCGTTCTTACTGAACTCATA
 
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rJMSF020P20+          TCCTCAATGCCTGCTGTGGATGTACGCAGGCATGCACACGAGATCAGTTTGGCAAAACTA
rJMSF049O08+          TCCTCAATGCCTGCTGTGGATGTACGCAGGCATGCACACGAGATCAGTTTGGCAAAACTA
                      ____________________________________________________________
consensus             TCCTCAATGCCTGCTGTGGATGTACGCAGGCATGCACACGAGATCAGTTTGGCAAAACTA
 
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rJMSF020P20+          GCAACAAACAAGATTCTAATAGGAGCATTTGACGAACTCATTGATTCCTCTCTGGGGTAT
rJMSF049O08+          GCAACAAACAAGATTCTAATAGGAGCATTTGACGAACTCATTGATTCCTCTCTGGGGTAT
                      ____________________________________________________________
consensus             GCAACAAACAAGATTCTAATAGGAGCATTTGACGAACTCATTGATTCCTCTCTGGGGTAT
 
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rJMSF020P20+          GAGATGGATACTGAAATCAAGAGAATGACTACTTCAGTAGCAGAGCTAGCTTTTCGGTGC
rJMSF049O08+          GAGATGGATACTGAAATCAAGAGAATGACTACTTCAGTAGCAGAGCTAGCTTTTCGGTGC
                      ____________________________________________________________
consensus             GAGATGGATACTGAAATCAAGAGAATGACTACTTCAGTAGCAGAGCTAGCTTTTCGGTGC
 
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rJMSF020P20+          TTGCAACCTGACAAGGATATGAGGCCTACAATGGAACAGGTATTGGAGTCATTGAAGGAG
rJMSF049O08+          TTGCAACCTGACAAGGATATGAGGCCTACAATGGAACAGGTATTGGAGTCATTGAAGGAG
                      ____________________________________________________________
consensus             TTGCAACCTGACAAGGATATGAGGCCTACAATGGAACAGGTATTGGAGTCATTGAAGGAG
 
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rJMSF020P20+          ATTCGAGGCGATGAGGATGAAAGGGTGAATGGTGAGGAAACTGATGCCTCTACAGTAGAG
rJMSF049O08+          ATTCGAGGCGATGAGGATGAAAGGGTGAATGGTGAGGAAACTGATGCCTCTACAGTAGAG
                      ____________________________________________________________
consensus             ATTCGAGGCGATGAGGATGAAAGGGTGAATGGTGAGGAAACTGATGCCTCTACAGTAGAG
 
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rJMSF020P20+          GAATCACAAAGAAAAGCAGTGACCTGGGCTGGTCCCTCGCTTGCACCTCGTGGGATTTTG
rJMSF049O08+          GAATCACAAAGAAAAGCAGTGACCTGGGCTGGTCCCTCGCTTGCACCTCGTGGGATTTTG
                      ____________________________________________________________
consensus             GAATCACAAAGAAAAGCAGTGACCTGGGCTGGTCCCTCGCTTGCACCTCGTGGGATTTTG
 
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rJMSF020P20+          AAGCTCGTTGCAACTAGGAAGAGCAGTTGAAGTAACCGGATTTTGCCATTGCTTCTAACT
rJMSF049O08+          AAGCTCGTTGCAACTAGGAAGAGCAGTTGAAGTAACCGGATTTTGCCATTGCTTCTAACT
                      ____________________________________________________________
consensus             AAGCTCGTTGCAACTAGGAAGAGCAGTTGAAGTAACCGGATTTTGCCATTGCTTCTAACT
 
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rJMSF020P20+          ATGAGGGATTTGTTACAGAGTATTGTATTTCGTTTTCCTATCAAACTTATGATTATTGTG
rJMSF049O08+          ATGAGGGATTTGTTACAGAGTATTGTATTTCGTTTTCCTATCAAACTTATGATTATTGTG
                      ____________________________________________________________
consensus             ATGAGGGATTTGTTACAGAGTATTGTATTTCGTTTTCCTATCAAACTTATGATTATTGTG
 
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rJMSF020P20+          CCTATAATTGAAATTCAATTTCTTGAGAGTATATATTTGAACCACAGGCTTCATGTATTA
rJMSF049O08+          CCTATAATTGAAATTCAATTTCTTGAGAGTATATATTTGAACCACAGGCTTCATGTATTA
                      ____________________________________________________________
consensus             CCTATAATTGAAATTCAATTTCTTGAGAGTATATATTTGAACCACAGGCTTCATGTATTA
 
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rJMSF020P20+          ATTACAGTAAAATAAGAGTGTGTATCAGAACTCCT                         
rJMSF049O08+          ATTACAGTAAAATAAGAGTGTGTATCAGAACTCCTTGTAAATAGCCCTGCTGTTTTTCAG
                      ____________________________________________________________
consensus             ATTACAGTAAAATAAGAGTGTGTATCAGAACTCCTTGTAAATAGCCCTGCTGTTTTTCAG
 
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rJMSF049O08+          TGGACTTCAGCATATACTTCAGATAATTAGATCATCTTGCAGATATCTCTCTTACTATCC
                      ____________________________________________________________
consensus             TGGACTTCAGCATATACTTCAGATAATTAGATCATCTTGCAGATATCTCTCTTACTATCC