Contig 001491:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF008B14+                                                        AGATNAAAAGGAAT
                      ____________________________________________________________
consensus                                                           AGATNAAAAGGAAT
 
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rJMSF008B14+          ATTACTTTGCNTGCCCTGATGATGGAACTTTCAGATATATGGGAAAGTTTATATAGTCAT
rJMSF049J24+                TTGCNTGCCCTGATGATGAAACTTTCAGATATATGGG-AAGTTTATATAGTCAT
                      ____________________________________________________________
consensus             ATTACTTTGCNTGCCCTGATGATGGAACTTTCAGATATATGGGAAAGTTTATATAGTCAT
 
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rJMSF008B14+          CATCACCGTAACATGTCTTTAAGCACGGAATTTGCAGAAGGAATTACAAATGGTGCACAT
rJMSF049J24+          CATCACCGTAACATGTCTCTAAGCACGGAATTTGCAGAAGGAATTACAAATGGTGCACAT
                      ____________________________________________________________
consensus             CATCACCGTAACATGTCTTTAAGCACGGAATTTGCAGAAGGAATTACAAATGGTGCACAT
 
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rJMSF008B14+          TGGTACCCTATTTATGGCGGCATGCAAGATTGGAATTACATAAATGCCGGCTGTTTTGAG
rJMSF049J24+          TGGTACCCTATTTATGGCGGCATGCAAGATTGGAATTACATAAATGCCGGCTGTTTTGAG
                      ____________________________________________________________
consensus             TGGTACCCTATTTATGGCGGCATGCAAGATTGGAATTACATAAATGCCGGCTGTTTTGAG
 
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rJMSF008B14+          TTAACATTAGAGATTAGTGATGATAAATGGCCTAATGCAACTGAACTTCCCACTCTTTGG
rJMSF049J24+          TTAACATTAGAGATTAGTGATGATAAATGGCCTAATGCAACTGAACTTCCCACTCTTTGG
                      ____________________________________________________________
consensus             TTAACATTAGAGATTAGTGATGATAAATGGCCTAATGCAACTGAACTTCCCACTCTTTGG
 
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rJMSF008B14+          GAATACAACAAAATGAGTATGCTACATCTTGTTGCAAGTGTTGTAAAGGCCGGAATTCAT
rJMSF049J24+          GAATACAACAAAATGAGTATGCTACATCTTGTTGCAAGTGTTGTAAAGGCCGGAATTCAT
                      ____________________________________________________________
consensus             GAATACAACAAAATGAGTATGCTACATCTTGTTGCAAGTGTTGTAAAGGCCGGAATTCAT
 
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rJMSF008B14+          GGAAAGATCTTTTCTTCTGATCATGGAAAGCCTTTACCCGCTTCAATAGACATAAAGGGA
rJMSF049J24+          GGAAAGATCTTTTCTTCTGATCATGGAAAGCCTTTACCCGCTTCAATAGACATAAAGGGA
                      ____________________________________________________________
consensus             GGAAAGATCTTTTCTTCTGATCATGGAAAGCCTTTACCCGCTTCAATAGACATAAAGGGA
 
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rJMSF008B14+          ATAAATTACACGATAAAAGCTGGCGAAACATTTGCAGACTACCACCGCCTATTAGCTCCT
rJMSF049J24+          ATAAATTACACGATAAAAGCTGGCGAAACATTTGCAGACTACCACCGCCTATTAGCTCCT
                      ____________________________________________________________
consensus             ATAAATTACACGATAAAAGCTGGCGAAACATTTGCAGACTACCACCGCCTATTAGCTCCT
 
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rJMSF008B14+          GGCAACAATTATGAAGTTGTGGCAACGATGCCGGGATACAAGTCAAAGAGCACTCACATC
rJMSF049J24+          GGCAACAATTATGAAGTTGTGGCAACGATGCCGGGATACAAGTCAAAGAGCACTCACATC
                      ____________________________________________________________
consensus             GGCAACAATTATGAAGTTGTGGCAACGATGCCGGGATACAAGTCAAAGAGCACTCACATC
 
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rJMSF008B14+          ATTTTGGGGGAAGAAGCCATGACAGTGGACTTTATTCTTGATCCGGTAATCGCTAATGCA
rJMSF049J24+          ATTTTGGGGGAAGAAGCCATGACAGTGGACTTTATTCTTGATCCGGTAATCGCTAATGCA
                      ____________________________________________________________
consensus             ATTTTGGGGGAAGAAGCCATGACAGTGGACTTTATTCTTGATCCGGTAATCGCTAATGCA
 
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rJMSF008B14+          GATGATGGCTCCTTGCAGAAGAGCTGGGATAACAACTTCTTGCCATGGTGGCAGTCGAAA
rJMSF049J24+          GATGATGGCTCCTTGCAGAAGAGCTGGGATAACAACTTCTTGCCATGGTGGCAGTCGAAA
                      ____________________________________________________________
consensus             GATGATGGCTCCTTGCAGAAGAGCTGGGATAACAACTTCTTGCCATGGTGGCAGTCGAAA
 
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rJMSF008B14+          CTTTTTATTATTTTGATTCTAATATTGACTTTCCTTTGCATCTTATTGAGGAGTAGATTA
rJMSF049J24+          CTTTTTATTATTTTGATTCTAATATTGACTTTCCTTTGCATCTTATTGAGGAGTAGATTA
                      ____________________________________________________________
consensus             CTTTTTATTATTTTGATTCTAATATTGACTTTCCTTTGCATCTTATTGAGGAGTAGATTA
 
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rJMSF008B14+          TTAAACCGGTCCAAACATAGACAGAATGCAGGGTTAAAAAGGCCTCAATTATAAGGTTTT
rJMSF049J24+          TTAAACCGGTCCAAACATAGACAGAATGCAGGGTTAAAAAGGCCTCAATTATAAGGTTTT
                      ____________________________________________________________
consensus             TTAAACCGGTCCAAACATAGACAGAATGCAGGGTTAAAAAGGCCTCAATTATAAGGTTTT
 
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rJMSF008B14+          TGAGTTTGCCTTCCTCAAGAGAATCTGTACCTTATAATGTAAAATTTTTA          
rJMSF049J24+          TGAGTTTGCCTTCCTCAAGAGAATCTGTACCTTATAATGTAAAATTTTTATATTACAATA
                      ____________________________________________________________
consensus             TGAGTTTGCCTTCCTCAAGAGAATCTGTACCTTATAATGTAAAATTTTTATATTACAATA