Contig 001488:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF008L21Sequence267007730 (3)ref|XP_006446860.1|3e-18hypothetical protein CICLE_v10015616mg [Citrus clementina] gb|ESR60100.1| hypoth734001488 (2)ref|XP_009782424.1|4e-59PREDICTED: O-acyltransferase WSD1-like isoform X1 [Nicotiana sylvestris]
JMSF049D11Sequence693007730 (3)ref|XP_009782424.1|4e-82PREDICTED: O-acyltransferase WSD1-like isoform X1 [Nicotiana sylvestris]778001488 (2)ref|XP_009782424.1|1e-74PREDICTED: O-acyltransferase WSD1-like isoform X1 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF008L21+                                                    GGAGGTTATAAGTCGGTG
rJMSF049D11+          GAATGCACGGCGCTGGTGCTGTTCAACACGAGGGCGATGGGAGGAGGTTATAAGTCGGTG
                      ____________________________________________________________
consensus             GAATGCACGGCGCTGGTGCTGTTCAACACGAGGGCGATGGGAGGAGGTTATAAGTCGGTG
 
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rJMSF008L21+          AGCGAGATGATCCAANCCCNACGCGGAAATGCCATGGGGAAACCGGATCACGTTTCTCCC
rJMSF049D11+          AGCGAGATGATCAAA-CCCAACGCGGAAATGCCATGGGGAAACCGGATCACGTTTCTCCC
                      ____________________________________________________________
consensus             AGCGAGATGATCCAANCCCAACGCGGAAATGCCATGGGGAAACCGGATCACGTTTCTCCC
 
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rJMSF008L21+          CTTCGCGATACCCAAACTGCGCTCCCCCGGCGACGGCGACTCGTCCAATCCCCTCCGGTT
rJMSF049D11+          CTTCGCGATACCCAAACTGCGCTCCCCCGGCGACGGCGACTCGTCCAATCCCCTCCGGTT
                      ____________________________________________________________
consensus             CTTCGCGATACCCAAACTGCGCTCCCCCGGCGACGGCGACTCGTCCAATCCCCTCCGGTT
 
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rJMSF008L21+          CATCTACAACGCCCACCGCATGGTCAAGCGGCAACGCTATTCCGCGTCCCTCTATCTCAC
rJMSF049D11+          CATCTACAACGCCCACCGCATGGTCAAGCGGCAACGCTATTCCGCGTCCCTCTATCTCAC
                      ____________________________________________________________
consensus             CATCTACAACGCCCACCGCATGGTCAAGCGGCAACGCTATTCCGCGTCCCTCTATCTCAC
 
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rJMSF008L21+          CGGCCAGTTCCTCGAATTCACCAGAAAGCTCAGGGGCCTTGAGGCAACTGCACAGTTCTT
rJMSF049D11+          CGGCCAGTTCCTCGAATTCACCAGAAAGCTCAGGGGCCTTGAGGCAACTGCACAGTTCTT
                      ____________________________________________________________
consensus             CGGCCAGTTCCTCGAATTCACCAGAAAGCTCAGGGGCCTTGAGGCAACTGCACAGTTCTT
 
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rJMSF008L21+          ACGTAGAACGTTAAAGAACACAAGTATTACCATGACGAACATAATCGGTCCGGTGGAAGA
rJMSF049D11+          ACGTAGAACGTTAAAGAACACAAGTATTACCATGACGAACATAATCGGTCCGGTGGAAGA
                      ____________________________________________________________
consensus             ACGTAGAACGTTAAAGAACACAAGTATTACCATGACGAACATAATCGGTCCGGTGGAAGA
 
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rJMSF008L21+          AACCACCCTTTGTAACCATCCAATAAAGGGCATGTACTTCGCTGTATCTGGAGCCCCTCA
rJMSF049D11+          AACCACCCTTTGTAACCATCCAATAAAGGGCATGTACTTCGCTGTATCTGGAGCCCCTCA
                      ____________________________________________________________
consensus             AACCACCCTTTGTAACCATCCAATAAAGGGCATGTACTTCGCTGTATCTGGAGCCCCTCA
 
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rJMSF008L21+          GAATTTATTGGTGACGATGTTGAGCTACGCGGGAAAACTGAGAGTCACCATTTGTTCGGA
rJMSF049D11+          GAATTTATTGGTGACGATGTTGAGCTACGCGGGAAAACTGAGAGTCACCATTTGTTCGGA
                      ____________________________________________________________
consensus             GAATTTATTGGTGACGATGTTGAGCTACGCGGGAAAACTGAGAGTCACCATTTGTTCGGA
 
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rJMSF008L21+          GAAAGATTTCATAGATGGGAAGAAACTGAAGTCATGTATTGAGTCTGCTTTTGATGAAAT
rJMSF049D11+          GAAAGATTTCATAGATGGGAAGAAACTGAAGTCATGTATTGAGTCTGCTTTTGATGAAAT
                      ____________________________________________________________
consensus             GAAAGATTTCATAGATGGGAAGAAACTGAAGTCATGTATTGAGTCTGCTTTTGATGAAAT
 
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rJMSF008L21+          CTTCAGATTAACACTCAAGTCTTCTCCACCACGTGCATGAATATATATACACATATATAG
rJMSF049D11+          CTTCAGATTAACACTCAAGTCTTCTCCACCACGTGCATGAATATATATACACATATATAG
                      ____________________________________________________________
consensus             CTTCAGATTAACACTCAAGTCTTCTCCACCACGTGCATGAATATATATACACATATATAG
 
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rJMSF008L21+          TCTATAAGTATTCCTGCATGCATATGCTTATATATGCATGTGTATGTAATTTTGTGTTGT
rJMSF049D11+          TCTATAAGTATTCCTGCATGCATATGCTTATATATGCATGTGTATGTAATTTTGTGTTGT
                      ____________________________________________________________
consensus             TCTATAAGTATTCCTGCATGCATATGCTTATATATGCATGTGTATGTAATTTTGTGTTGT
 
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rJMSF008L21+          TTTCTCCAACATCTATATACGTCAAAGGTTATGAAGTTAGCCGTGTTAAGTTTACTATGG
rJMSF049D11+          TTTCTCCAACATCTATATACGTCAAAGGTTATGAAGTTAGCCGTGTTAAGTTTACTATGG
                      ____________________________________________________________
consensus             TTTCTCCAACATCTATATACGTCAAAGGTTATGAAGTTAGCCGTGTTAAGTTTACTATGG
 
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rJMSF008L21+          GTTCGGGTCAAGCTCATGTGAAAAGGTTATGAGTTCAACTATATATATATGTCTAT    
rJMSF049D11+          GTTCGGGTCAAGCTCATGTG-AAAGGTTATGAGTTCAACTATATATATATGTCTATGTGT
                      ____________________________________________________________
consensus             GTTCGGGTCAAGCTCATGTGAAAAGGTTATGAGTTCAACTATATATATATGTCTATGTGT