Contig 001474:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF045J01Sequence769009526 (3)emb|CBI35979.3|2e-63unnamed protein product [Vitis vinifera]737001474 (2)ref|XP_009589395.1|112PREDICTED: uncharacterized protein LOC104086767 [Nicotiana tomentosiformis]
JMSF050J03Sequence676009526 (3)emb|CBI35979.3|2e-63unnamed protein product [Vitis vinifera]722001474 (2)ref|XP_006343009.1|3e-24PREDICTED: dentin sialophosphoprotein-like [Solanum tuberosum]

Alignment

This contig is upended


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rJMSF050J03+                                               AGGATCCAGAGTTCAGGGTACCG
                      ____________________________________________________________
consensus                                                  AGGATCCAGAGTTCAGGGTACCG
 
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rJMSF050J03+          ATTAATGGTTTCTCACAATATAAAGAATATGTGGAGGAGTATCATGAGAAGTATGAGAAA
rJMSF045J01+                           ATATAAAGAATATGTGGAGGAGTATCATGAGAAGTATGAGAAA
                      ____________________________________________________________
consensus             ATTAATGGTTTCTCACAATATAAAGAATATGTGGAGGAGTATCATGAGAAGTATGAGAAA
 
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rJMSF050J03+          TATTGCTTGCTGAAGAAAACCTTGGAGTCCTACAGGTTTGAGTTCTTTGAACTTGGAAAG
rJMSF045J01+          TATTGCTTGCTGAAGAAAACCTTGGAGTCNTACAGGTTTGAGTTCTTTGAACTTGGAAAG
                      ____________________________________________________________
consensus             TATTGCTTGCTGAAGAAAACCTTGGAGTCCTACAGGTTTGAGTTCTTTGAACTTGGAAAG
 
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rJMSF050J03+          GACTTAGACATCTGTAAAGGAAAGGACATGGAGAGGTACTATGAAATTTTGGCACGGTTG
rJMSF045J01+          GACTTAGACATCTGTAAAGGAAAGGACATGGAGAGGTACTATGAAATTTTGGCACGGTTG
                      ____________________________________________________________
consensus             GACTTAGACATCTGTAAAGGAAAGGACATGGAGAGGTACTATGAAATTTTGGCACGGTTG
 
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rJMSF050J03+          AAGGATTCTTATTGCCAATATGGACCAGGACATAAACGACTAAAGAAAATATTCATCGTG
rJMSF045J01+          AAGGATTCTTATTGCCAATATGGACCAGGACATAAACGACTAAAGAAAATATTCATCGTG
                      ____________________________________________________________
consensus             AAGGATTCTTATTGCCAATATGGACCAGGACATAAACGACTAAAGAAAATATTCATCGTG
 
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rJMSF050J03+          CTTCACAAAGAACTGAAGCATTTGAAACAGATGATCAATGACTTTGCTGCTTCATATTGC
rJMSF045J01+          CTTCACAAAGAACTGAAGCATTTGAAACAGATGATCAATGACTTTGCTGCTTCATATTGC
                      ____________________________________________________________
consensus             CTTCACAAAGAACTGAAGCATTTGAAACAGATGATCAATGACTTTGCTGCTTCATATTGC
 
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rJMSF050J03+          AAAGATCGATAAACGGATTTCTTCTCCAGTTTTGCCTGTATCCATGCTTACTACAGTTTG
rJMSF045J01+          AAAGATCGATAAACGGATTTCTTCTCCAGTTTTGCCTGTATCCATGCTTACTACAGTTTG
                      ____________________________________________________________
consensus             AAAGATCGATAAACGGATTTCTTCTCCAGTTTTGCCTGTATCCATGCTTACTACAGTTTG
 
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rJMSF050J03+          TTCTCATATCTTCCATGGTTGAAGGCCATTCAACATAATGGTTAGATTTTTCCAAAGAGG
rJMSF045J01+          TTCTCATATCTTCCATGGNTGAAGGCCATTCAACATAATGGTTAGATTTTTCCAAAGAGG
                      ____________________________________________________________
consensus             TTCTCATATCTTCCATGGTTGAAGGCCATTCAACATAATGGTTAGATTTTTCCAAAGAGG
 
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rJMSF050J03+          CTTATTGAAATGTGATTAGTAACCTAAGCCTCCTATTCTGATATCTTCCTCGATCTGAAG
rJMSF045J01+          CTTATTGAAATGTGATTAGTAACCTAAGCCTCCTATTCTGATATCTTCCTCGATCTGAAG
                      ____________________________________________________________
consensus             CTTATTGAAATGTGATTAGTAACCTAAGCCTCCTATTCTGATATCTTCCTCGATCTGAAG
 
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rJMSF050J03+          TAGGCGACCAGCCGATCACCTTCTTCTTCTTCTTGCAAGCGATGGTCGTTTTTTGTTAGC
rJMSF045J01+          TAGGCGACCAGCCGATCACCTTCTTCTTCTTCTTGCAAGCGATGGTCGTTTTTTGTTAGC
                      ____________________________________________________________
consensus             TAGGCGACCAGCCGATCACCTTCTTCTTCTTCTTGCAAGCGATGGTCGTTTTTTGTTAGC
 
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rJMSF050J03+          AGAAGCAACGGTTGCCGGAACCCTAAAATATCTACATTACCGGTTGATAAACAATTATTA
rJMSF045J01+          AGAAGCAACGGTTGCCGGAACCCTAAAATATCTACATTACCGGTTGATAAACAATTNTTA
                      ____________________________________________________________
consensus             AGAAGCAACGGTTGCCGGAACCCTAAAATATCTACATTACCGGTTGATAAACAATTATTA
 
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rJMSF050J03+          TGCTTAAATGCAAAAAAAATGACAAGTTGCTGTATTTAATTGTACTCCGTAACTTTTTAA
rJMSF045J01+          TGCTTAAATGCAAAAAAAATGACAAGTTGCTGTATTTAATTGTACTCCGTAACTTTTTAA
                      ____________________________________________________________
consensus             TGCTTAAATGCAAAAAAAATGACAAGTTGCTGTATTTAATTGTACTCCGTAACTTTTTAA
 
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rJMSF050J03+          AGTTTAAGGCTTAATTGTTTTTTCGTATGAAGTTCAAGG                     
rJMSF045J01+          AGTTTAAGGCTTAATTGTTTTTTCGTATGAAGTTCAAGGNATATTTGACAATTTTCAATA
                      ____________________________________________________________
consensus             AGTTTAAGGCTTAATTGTTTTTTCGTATGAAGTTCAAGGNATATTTGACAATTTTCAATA