Contig 001472:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF030L02+                      CTACTCAGTTGGACATTAGCGCGTGGTTTGAAGTGGAGAATAGCAGCG
rJMSF045H04+                       TACTCAGTTGGACATTAGCGCGTGGTTTGAAGTGGAGAATAGCAGCG
                      ____________________________________________________________
consensus                         CTACTCAGTTGGACATTAGCGCGTGGTTTGAAGTGGAGAATAGCAGCG
 
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rJMSF030L02+          TGGAAGTGGAAGTGGAAGCGGACGGCGGGTACAATTGCAGTAGCAGCGGCGGCGCTGTTA
rJMSF045H04+          TGGAAGTGGAAGTGGAAGCGGACGGCGGGTACAATTGCAGTAGCAGCGGCGGCGCTNTTA
                      ____________________________________________________________
consensus             TGGAAGTGGAAGTGGAAGCGGACGGCGGGTACAATTGCAGTAGCAGCGGCGGCGCTGTTA
 
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rJMSF030L02+          GGCGAGGCGCTTTGGGGCCATTCGGAGTTGTAGTGATTGCAGACGAAACGCTTTCTGAGC
rJMSF045H04+          GGCGAGGCGCTTTGGGGCCATTCGGAGTTGTAGTGATTGCAGACGAAACGCTTTCTGAGC
                      ____________________________________________________________
consensus             GGCGAGGCGCTTTGGGGCCATTCGGAGTTGTAGTGATTGCAGACGAAACGCTTTCTGAGC
 
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rJMSF030L02+          TCACGCCGGTGTACTTCTACATCTCAAAGGGCACCGACGGGAAATCACACACTCATTTCT
rJMSF045H04+          TCACGCCGGTGTACTTCTACATCTCAAAGGGCACCGACGGGNAATCACACACTCATTTCT
                      ____________________________________________________________
consensus             TCACGCCGGTGTACTTCTACATCTCAAAGGGCACCGACGGGAAATCACACACTCATTTCT
 
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rJMSF030L02+          GCACTGACCAAACAAGATCGTCGGAGTCTTCCAGTGTTGGGAAAGACGTTTATGGAAGCA
rJMSF045H04+          GCNCTGACCAAACAAGATCGTCGGAGTCTTCCAGTGTTGGGAAAGACGTTTATGGAAGCA
                      ____________________________________________________________
consensus             GCACTGACCAAACAAGATCGTCGGAGTCTTCCAGTGTTGGGAAAGACGTTTATGGAAGCA
 
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rJMSF030L02+          CGGTGCCTGTTCTTGAGGGTGAACCCTACACTACCAGAATATTGGTGGACCACTCGATCG
rJMSF045H04+          CGGTGCCTGTTCTTGAGGGTGAACCCTACACTNCCAGAATATTGGTGGACCACTCGATCG
                      ____________________________________________________________
consensus             CGGTGCCTGTTCTTGAGGGTGAACCCTACACTACCAGAATATTGGTGGACCACTCGATCG
 
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rJMSF030L02+          TGGAGAGCTTTGCTCAAGGAGGGAGAACGGTGATAACATCAAGAATTTATCCAACGAAAG
rJMSF045H04+          TGGAGAGCTTTGCTCAAGGAGGGAGAACGGTGATAACATCAAGAATTTATCCAACGAAAG
                      ____________________________________________________________
consensus             TGGAGAGCTTTGCTCAAGGAGGGAGAACGGTGATAACATCAAGAATTTATCCAACGAAAG
 
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rJMSF030L02+          CCATATACGGAGCTGCAAGGGTTTTCCTCTTCAACAACGCCACAGAGGCAAGCGTGAAGG
rJMSF045H04+          CCATATACGGAGCTGCAAGGGTTTTCNTCTTCAACAACGCCACAGAGGCAAGCGTGAAGG
                      ____________________________________________________________
consensus             CCATATACGGAGCTGCAAGGGTTTTCCTCTTCAACAACGCCACAGAGGCAAGCGTGAAGG
 
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rJMSF030L02+          CGTCGGTGAAGATCTGGGAAATGGGATCAGCTGACATTAAACCATTCCCTTTCAGCAATG
rJMSF045H04+          CGTCGGTGAAGATCTGGGAAATGGGATCAGCTGACANTAAACCATTCCCTTTCAGCAATG
                      ____________________________________________________________
consensus             CGTCGGTGAAGATCTGGGAAATGGGATCAGCTGACATTAAACCATTCCCTTTCAGCAATG
 
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rJMSF030L02+          AATTGTAATATATATATATATATATACTAATATGTGCACGTTAGTGCTGTTGTTGTTGTT
rJMSF045H04+          AATTGTAATATATATATATATATATNCTAATATGTGCACGTTAGTGCTGTTGTTGTTGTT
                      ____________________________________________________________
consensus             AATTGTAATATATATATATATATATACTAATATGTGCACGTTAGTGCTGTTGTTGTTGTT
 
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rJMSF030L02+          GTACCTTTTTAGGTATTTGGCTTCGTCGCATAATATAATTTAATATGAAGAGATGGAACC
rJMSF045H04+          GTACCTTTTTAGGTATTNNGCTTCGTCGCATAATATAATTTAATANGAAGAGATGGAACC
                      ____________________________________________________________
consensus             GTACCTTTTTAGGTATTTGGCTTCGTCGCATAATATAATTTAATATGAAGAGATGGAACC
 
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rJMSF030L02+          AGCGGTTTGTGCTCAACAAATGAAGAAAT                               
rJMSF045H04+          AGCGGTTTGTNCTCAACAAATGAAGAAATTGGGGTTACATAAGCAAGAATGTATAGAACT
                      ____________________________________________________________
consensus             AGCGGTTTGTGCTCAACAAATGAAGAAATTGGGGTTACATAAGCAAGAATGTATAGAACT