Contig 001466:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF010N22Sequence754001466 (3)ref|XP_009617477.1|7e-84PREDICTED: cysteine-rich receptor-like protein kinase 10, partial [Nicotiana to
JMSF038F05Sequence686002372 (3)ref|XP_009626038.1|1e-34PREDICTED: putative receptor-like protein kinase At4g00960 [Nicotiana tomentosi900001466 (3)ref|XP_009617477.1|3e-103PREDICTED: cysteine-rich receptor-like protein kinase 10, partial [Nicotiana to
JMSF044F14Sequence811002372 (3)ref|XP_009785802.1|2e-51PREDICTED: putative receptor-like protein kinase At4g00960 isoform X2 [Nicotian793001466 (3)ref|XP_009617477.1|3e-89PREDICTED: cysteine-rich receptor-like protein kinase 10, partial [Nicotiana to

Alignment

This contig is upended


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rJMSF038F05+                                           TATAAAATTCTTCTTCAATTCTGTCAT
                      ____________________________________________________________
consensus                                              TATAAAATTCTTCTTCAATTCTGTCAT
 
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rJMSF038F05+          TCAAATTTGATGTTGCATGCGACCTTGTAGACCCTATCAAAAGAGAAATTTTGGATTGGG
                      ____________________________________________________________
consensus             TCAAATTTGATGTTGCATGCGACCTTGTAGACCCTATCAAAAGAGAAATTTTGGATTGGG
 
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rJMSF038F05+          AAACGCGTTATAAAATCATAGGTGGCATTTCCAAGGGGCTTCTTTACCTCCATGAGGACT
rJMSF044F14+                                                        CCTCCATGAGGACT
                      ____________________________________________________________
consensus             AAACGCGTTATAAAATCATAGGTGGCATTTCCAAGGGGCTTCTTTACCTCCATGAGGACT
 
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rJMSF038F05+          CTCGTTTTCGCATCATTCATCGTGATCTCAAAGCAAGCAATGTTCTACTGGATGCAGAGA
rJMSF010N22+             GTTTTCGCATCATTCATCGTGATCTCAAAGCAAGCAATGTTNTACTGGATGCAGAGA
rJMSF044F14+          CTCGTTTTCGCATCATTCATCGTGATCTCAAAGCAAGCAATGTGCTACTGGATGCAGAGA
                      ____________________________________________________________
consensus             CTCGTTTTCGCATCATTCATCGTGATCTCAAAGCAAGCAATGTTCTACTGGATGCAGAGA
 
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rJMSF038F05+          TGAATCCAAAAATTTCAGACTTTGGCATGGCGAGGCTGTTTGAAGTAGATGAAAGCCAAG
rJMSF010N22+          TGAATCCAAAAATTTCAGACTTTGGCATGGCGAGGCTGTTTGAAGTAGATGAAAGCCAAG
rJMSF044F14+          TGAATCCAAAAATTTCAGACTTTGGCATGGCGAGGCTGTTTGAAGTAGATGAAAGCCAAG
                      ____________________________________________________________
consensus             TGAATCCAAAAATTTCAGACTTTGGCATGGCGAGGCTGTTTGAAGTAGATGAAAGCCAAG
 
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rJMSF038F05+          GCAGTACAAGCAGAATTGTGGGAACTTATGGATATATGGCACCGGAGTATGCAATGCACG
rJMSF010N22+          GCAGTACAAGCAGAATTGTGGGAACTTATGGATATATGGCACCGGAGTATGCAATGCACG
rJMSF044F14+          GCAGTACAAGCAGAATTGTGGGAACTTATGGATATATGGCACCGGAGTATGCAATGCACG
                      ____________________________________________________________
consensus             GCAGTACAAGCAGAATTGTGGGAACTTATGGATATATGGCACCGGAGTATGCAATGCACG
 
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rJMSF038F05+          GCCAATTTTCAGTTAAATCTGATGTGTTTAGTTTTGGAGTGTTGGTCTTAGAAATTTTAA
rJMSF010N22+          GCCAATTTTCAGTTAAATCTGATGTGTTTAGTTTTGGAGTGTTGGTCTTAGAAATTTTAA
rJMSF044F14+          GCCAATTTTCAGTTAAATCTGATGTGTTTAGTTTTGGAGTGTTGGTCTTAGAAATTTTAA
                      ____________________________________________________________
consensus             GCCAATTTTCAGTTAAATCTGATGTGTTTAGTTTTGGAGTGTTGGTCTTAGAAATTTTAA
 
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rJMSF038F05+          GTGGACAAAAGAATAATTGTTTCAAAAACGGGGAATCTGTTCAAGACCTTCTGAGCTATG
rJMSF010N22+          GTGGACAAAAGAATAATTGTTTCAAAAACGGGGAATCTGTTCAAGACCTTCTGAGCTATG
rJMSF044F14+          GTGGACAAAAGAATAATTGTTTCAAAAACGGGGAATCTGTTCAAGACCTTCTGAGCTATG
                      ____________________________________________________________
consensus             GTGGACAAAAGAATAATTGTTTCAAAAACGGGGAATCTGTTCAAGACCTTCTGAGCTATG
 
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rJMSF038F05+          CTTGGACACAGTGGCGGGGAGGGACAGCATTGAATCTGGTAGATCCCTTTCTTCGAGGAA
rJMSF010N22+          CTTGGACACAGTGGCGGGGAGGGACAGCATTGAATCTGGTAGATCCCTTTCTTCGAGGAA
rJMSF044F14+          CTTGGACACAGTGGCGGGGAGGGACAGCATTGAATCTGGTAGATCCCTTTCTTCGAGGAA
                      ____________________________________________________________
consensus             CTTGGACACAGTGGCGGGGAGGGACAGCATTGAATCTGGTAGATCCCTTTCTTCGAGGAA
 
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rJMSF038F05+          ATTCAGGTTCAGTGCCTGAAATAATGAGATGCATACACATGGGGTTGCTGTGTGTTCAAG
rJMSF010N22+          ATTCAGGTTCAGTGCCTGAAATAATGAGATGCATACACATGGGGTTGCTGTGTGTTCAAG
rJMSF044F14+          ATTCAGGTTCAGTGCCTGAAATAATGAGATGCATACACATGGGGTTGCTGTGTGTTCAAG
                      ____________________________________________________________
consensus             ATTCAGGTTCAGTGCCTGAAATAATGAGATGCATACACATGGGGTTGCTGTGTGTTCAAG
 
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rJMSF038F05+          AAAATGTTGCAGACAGACCAACAATGTCCACAGTTGTTCTCGTACTAAGTAGTTCTTCTC
rJMSF010N22+          AAAATGTTGCAGACAGACCAACAATGTCCACAGTTGTTCTCGTACTAAGTAGTTCTTCTC
rJMSF044F14+          AAAATGTTGCAGACAGACCAACAATGTCCACAGTTGTTCTCGTACTAAGTAGTTCTTCTC
                      ____________________________________________________________
consensus             AAAATGTTGCAGACAGACCAACAATGTCCACAGTTGTTCTCGTACTAAGTAGTTCTTCTC
 
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rJMSF038F05+          TGAGTCTTCCATTGCCATCCGCACCAGCATTCTTCATGCACAGTACTATAAGCCCTGAGG
rJMSF010N22+          TGAGTCTTCCATTGCCATCCGCACCAGCATTCTTCATGCACAGTACTATAAGCCCTGAGG
rJMSF044F14+          TGAGTCTTCCATTGCCATCCGCACCAGCATTCTTCATGCACAGTACTATAAGCCCTGAGG
                      ____________________________________________________________
consensus             TGAGTCTTCCATTGCCATCCGCACCAGCATTCTTCATGCACAGTACTATAAGCCCTGAGG
 
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rJMSF038F05+          CTCCCCTGCTGCTTAATGAAGCAGCAGCAGCAGCTTATTCATCGTCTCAAAATGAGGCCT
rJMSF010N22+          CTCCCCTGCTGCTTAATGAAGCAGCAGCAGCAGCTTATTCATCGTCTCAAAATGAGGCCT
rJMSF044F14+          CTCCCCTGCTGCTTAATGAAGCAGCAGCAGCAGCTTATTCATCGTCTCAAAATGAGGCCT
                      ____________________________________________________________
consensus             CTCCCCTGCTGCTTAATGAAGCAGCAGCAGCAGCTTATTCATCGTCTCAAAATGAGGCCT
 
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rJMSF038F05+          CCATTACTGAGTTACACCCCAGATGAAATCCATCCATTTTCGACCTCCGGCCTCATGATC
rJMSF010N22+          CCATTACTGAGTTACACCCCAGATGAAATCCATCCATTTTCGACCTCCGGCCTCATGATC
rJMSF044F14+          CCATTACTGAGTTACACCCCAGATGAAATCCATCCATTTTCGACCTCCGGCCTCATGATC
                      ____________________________________________________________
consensus             CCATTACTGAGTTACACCCCAGATGAAATCCATCCATTTTCGACCTCCGGCCTCATGATC
 
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rJMSF038F05+          CAACTTCCTTATTGAAGAATATTAAGAATAAAGATCAAACATGTCACCGAACTGTA-CTT
rJMSF010N22+          CAACTTCCTTATTGAAGAATATTAAGAATAAAGATCAAACATGTCACCGAACTGTACCTT
rJMSF044F14+          CAACTTCCTTATTGAAGAATATTAAGAATAAAGATCAAACATGTCACCGAACTGTA-CTT
                      ____________________________________________________________
consensus             CAACTTCCTTATTGAAGAATATTAAGAATAAAGATCAAACATGTCACCGAACTGTA-CTT
 
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rJMSF038F05+          GATAGTATAATTAGGTTACTGAACCTAAAAAAAA                          
rJMSF010N22+          GATAGTATAATTAGGTTACTGAACCTAAAAAAAA                          
rJMSF044F14+          GATAGTATAATTAGGTTACTGAACCTAAAAAAAAACTATAATTATATCTTAAACTACCAA
                      ____________________________________________________________
consensus             GATAGTATAATTAGGTTACTGAACCTAAAAAAAAACTATAATTATATCTTAAACTACCAA