Contig 001464:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF043L13+                 TTTTTTTTTTGACAGAGATAGTATTTATAACTATGAAAAAACAGTGATATTTTA
                      ____________________________________________________________
consensus                   TTTTTTTTTTGACAGAGATAGTATTTATAACTATGAAAAAACAGTGATATTTTA
 
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JMSF043L13+           TAAATAAAATATCAAAGTACTTCCTATTTATAGCAATTAATACTATTATTATTGCGGCGA
                      ____________________________________________________________
consensus             TAAATAAAATATCAAAGTACTTCCTATTTATAGCAATTAATACTATTATTATTGCGGCGA
 
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JMSF043L13+           CAATGCAACATGATACCCTACATCCACGCACACCAAAATCATGTGCGTGGCAGCGTATTA
                      ____________________________________________________________
consensus             CAATGCAACATGATACCCTACATCCACGCACACCAAAATCATGTGCGTGGCAGCGTATTA
 
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JMSF043L13+           CGCGTCTAGTCTGGATGATGGACGGCTACTGCTTGTTCGTCATCATCTTTTTAAACTCCT
JMFN003E16+                                                                AACTCCT
rJMSF043L13-                                                               AACTCCT
                      ____________________________________________________________
consensus             CGCGTCTAGTCTGGATGATGGACGGCTACTGCTTGTTCGTCATCATCTTTTTAAACTCCT
 
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JMSF043L13+           CGAAGCTCACGCTGCCGTCGCCGTCGGAATCCACCGATTTGATCATCCCGACGCAGGCGT
JMFN003E16+           CGAAGCTCACGCTGCCGTCGCCGTCGGAATCCACCGATTTGATCATCCCGACGCAGGCGT
rJMSF043L13-          CGAAGCTCACGCTGCCGTCGCCGTCGGAATCCACCGATTTGATCATCCCGACGCAGGCGT
                      ____________________________________________________________
consensus             CGAAGCTCACGCTGCCGTCGCCGTCGGAATCCACCGATTTGATCATCCCGACGCAGGCGT
 
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JMSF043L13+           CCATGGTGCAGTGCTCGCCGAGGCGGGTGAGGATCTTGTGCAGCTCCGCGGCGGAGATTA
JMFN003E16+           CCATGGTGCAGTGCTCGCCGAGGCGGGTGAGGATCTTGTGCAGCTCCGCGGCGGAGATTA
rJMSF043L13-          CCATGGTGCAGTGCTCGCCGAGGCGGGTGAGGATCTTGTGCAGCTCCGCGGCGGAGATTA
                      ____________________________________________________________
consensus             CCATGGTGCAGTGCTCGCCGAGGCGGGTGAGGATCTTGTGCAGCTCCGCGGCGGAGATTA
 
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JMSF043L13+           AGCCGTTCCTATCCTCGTCGTAGAGGTCGAACGCCTCGCGGAGCTCGTTCATGCCGCCAT
JMFN003E16+           AGCCGTTCCTATCCTCGTCGTAGAGGTCGAACGCCTCGCGGAGCTCGTTCATGCCGCCAT
rJMSF043L13-          AGCCGTTCCTATCCTCGTCGTAGAGGTCGAACGCCTCGCGGAGCTCGTTCATGCCGCCAT
                      ____________________________________________________________
consensus             AGCCGTTCCTATCCTCGTCGTAGAGGTCGAACGCCTCGCGGAGCTCGTTCATGCCGCCAT
 
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JMSF043L13+           CGCCGTCGCCCTTGCAGAAGCCGGCGAACTCCTGGAGGTTGATGAATCCGTCCTTGTCGG
JMFN003E16+           CGCCGTCGCCCTTGCAGAAGCCGGCGAACTCCTGGAGGTTGATGAATCCGTCCTTGTCGG
rJMSF043L13-          CGCCGTCGCCCTTGCAGAAGCCGGCGAACTCCTGGAGGTTGATGAATCCGTCCTTGTCGG
                      ____________________________________________________________
consensus             CGCCGTCGCCCTTGCAGAAGCCGGCGAACTCCTGGAGGTTGATGAATCCGTCCTTGTCGG
 
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JMSF043L13+           TGTCTATTCCCTCCATAATCCTCCCCAGTTCCTCATGCGAGATGTCGGATCCCAGGGCCT
JMFN003E16+           TGTCTATTCCCTCCATAATCCTCCCCAGTTCCTCAGGCGAGATGTCGGATCCCAGGGCCT
rJMSF043L13-          TGTCTATTCCCTCCATAATCCTCCCCAGTTCCTCATGCGAGATGTCGGATCCCAGGGCCT
                      ____________________________________________________________
consensus             TGTCTATTCCCTCCATAATCCTCCCCAGTTCCTCATGCGAGATGTCGGATCCCAGGGCCT
 
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JMSF043L13+           TCATGACGCCGGCGAGCTCCTCCGCCGAGATCTTGCCGTCGCCGTTGGAGTCGAACCGCT
JMFN003E16+           TCATGACGCCGGCGAGCTCCTCCGCCGAGATCTTGCCGTCGCCGTTGGAGTCGAACCGCT
rJMSF043L13-          TCATGACGCCGGCGAGCTCCTCCGCCGAGATCTTGCCGTCGCCGTTGGAGTCGAACCGCT
                      ____________________________________________________________
consensus             TCATGACGCCGGCGAGCTCCTCCGCCGAGATCTTGCCGTCGCCGTTGGAGTCGAACCGCT
 
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JMSF043L13+           CGAACACCTTCTGAACCTCCTGCGGGTCCTGCAGGTTCACCGTCGGCCTCGTACTAGGGT
JMFN003E16+           CGAACACCTTCTGAACCTCCTGCGGGTCCTGCAGGTTCACCGTCGGCCTCGTACTAGGGT
rJMSF043L13-          CGAACACCTTCTGAACCTCCTGCGGGTCCTGCAGGTTCACCGTCGGCCTCGTACTAGGGT
                      ____________________________________________________________
consensus             CGAACACCTTCTGAACCTCCTGCGGGTCCTGCAGGTTCACCGTCGGCCTCGTACTAGGGT
 
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JMSF043L13+           TTGCATTCGTCGCCATTGCCGTTAATATTTGAGAGATAGAGAAGATTTAGTTCACCTACC
JMFN003E16+           TTGCATTCGTCGCCATTGCCGTTAATATTTGAGAGATAGA                    
rJMSF043L13-          TTGCATTCGTCGCCATTGCCGTTAATATTTGAGAGATAGAGAAGATTTAGTTCACCTACC
                      ____________________________________________________________
consensus             TTGCATTCGTCGCCATTGCCGTTAATATTTGAGAGATAGAGAAGATTTAGTTCACCTACC