| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF013H03 | Sequence | 590 | 005260 (5) | ref|XP_011038086.1| | 2e-50 | PREDICTED: subtilisin-like protease SBT3.5 [Populus euphratica] | 678 | 001463 (4) | ref|XP_006365013.1| | 4e-90 | PREDICTED: subtilisin-like protease-like [Solanum tuberosum] |
| JMSF019I04 | Sequence | 257 | 005260 (5) | ref|XP_004509477.1| | 3e-14 | PREDICTED: subtilisin-like protease SDD1-like isoform X1 [Cicer arietinum] | 756 | 001463 (4) | ref|XP_006365013.1| | 6e-105 | PREDICTED: subtilisin-like protease-like [Solanum tuberosum] |
| JMSF019O10 | Sequence | 346 | 005260 (5) | 787 | 001463 (4) | ref|XP_006365013.1| | 1e-113 | PREDICTED: subtilisin-like protease-like [Solanum tuberosum] | |||
| JMSF043K05 | Sequence | 669 | 005260 (5) | ref|XP_006370742.1| | 3e-69 | hypothetical protein POPTR_0001s460001g, partial [Populus trichocarpa] gb|ERP673 | 827 | 001463 (4) | ref|XP_006365013.1| | 2e-110 | PREDICTED: subtilisin-like protease-like [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
rJMSF019O10+ CCCCCATGTAACGGGGATTGTAGCCTTGATAAAA
rJMSF019I04+ TGATAAAA
rJMSF043K05+ TTCTATGGCTTGCCCCCCATGTAACGGGGATTGTAGCCTTGATAAAA
____________________________________________________________
consensus TTCTATGGCTTGCCCCCCATGTAACGGGGATTGTAGCCTTGATAAAA
. : . : . : . : . : . :
rJMSF019O10+ GCTGTGCATCCATCATGGTCTCCATCTGCGATAAAATCAGCAATCATGACAACGGCTACG
rJMSF019I04+ GCTGTGCATCCATCATGGTCTCCATCTGCGATAAAATCAGCAATCATGACAACGGCTACG
rJMSF043K05+ GCTGTGCATCCATCATGGTCTCCATCTGCGATAAAATCAGCAATCATGACAACGGCTACG
____________________________________________________________
consensus GCTGTGCATCCATCATGGTCTCCATCTGCGATAAAATCAGCAATCATGACAACGGCTACG
. : . : . : . : . : . :
rJMSF019O10+ GTTTTGAACAAGCATCACAAACCCATCTCTGCTGATCCCGATGGGAGAAGGGCCAATGCG
rJMSF019I04+ GTTTTGAACAAGCATCACAAACCCATCTCTGCTGATCCCGATGGGAGAAGGGCCAATGCG
rJMFF013H03+ CAAGCATCACAAACCCATTTCTGCTGATCCCGATGGGAGAAGGGCCAATGCG
rJMSF043K05+ GTTTTGAACAAGCATCACAAACCCATCTCTGCTGATCCCGATGGGAGAAGGGCCAATGCG
____________________________________________________________
consensus GTTTTGAACAAGCATCACAAACCCATCTCTGCTGATCCCGATGGGAGAAGGGCCAATGCG
. : . : . : . : . : . :
rJMSF019O10+ TTTGATTTTGGTTCTGGTTTTGTTAACCCAGCAAGAGTCCTTGATCCTGGTTTGGTCTAC
rJMSF019I04+ TTTGATTTTGGTTCTGGTTTTGTTAACCCAGCAAGAGTCCTTGATCCTGGTTTGGTCTAC
rJMFF013H03+ TTTGATTTTGGTTCTGGTTTTGTTAACCCAGCAAGAGTCCTTGATCCTGGTTTGGTCTAC
rJMSF043K05+ TTTGATTTTGGTTCTGGTTTTGTTAACCCAGCAAGAGTCCTTGATCCTGGTTTGGTCTAC
____________________________________________________________
consensus TTTGATTTTGGTTCTGGTTTTGTTAACCCAGCAAGAGTCCTTGATCCTGGTTTGGTCTAC
. : . : . : . : . : . :
rJMSF019O10+ GATGCACAGCCAGCAGATTACAAAGCATTCCTCTGCTCAATTGGTTACAATGAGAGATCA
rJMSF019I04+ GATGCACAGCCAGCAGATTACAAAGCATTCCTCTGCTCAATTGGTTACAATGAGAGATCA
rJMFF013H03+ GATGCACAGCCAGCAGATTACAAAGCATTCCTCTGCTCAATTGGTTACAATGAGAGATCA
rJMSF043K05+ GATGCACAGCCAGCAGATTACAAAGCATTCCTCTGCTCAATTGGTTACAATGAGAGATCA
____________________________________________________________
consensus GATGCACAGCCAGCAGATTACAAAGCATTCCTCTGCTCAATTGGTTACAATGAGAGATCA
. : . : . : . : . : . :
rJMSF019O10+ CTGCACTTGATCACCGGAGACAACAGCACCTGTGATCAGACACTTCAATCACCATCCGCC
rJMSF019I04+ CTGCACTTGATCACCGGAGACAACAGCACCTGTGATCAGACACTTCAATCACCATCCGCC
rJMFF013H03+ CTGCACTTGATCACCGGAGACAACAGCACCTGTGATCAGACACTTCAATCACCATCCGCC
rJMSF043K05+ CTGCACTTGATCACCGGAGACAACAGCACCTGTGATCAGACACTTCAATCACCATCCGCC
____________________________________________________________
consensus CTGCACTTGATCACCGGAGACAACAGCACCTGTGATCAGACACTTCAATCACCATCCGCC
. : . : . : . : . : . :
rJMSF019O10+ CTTAACTACCCATCCATTACAGTGCCAGCCCTCATCCACAAGTTCTCGGTGACCAGAACT
rJMSF019I04+ CTTAACTACCCATCCATTACAGTGCCAGCCCTCATCCACAAGTTCTCGGTGACCAGAACT
rJMFF013H03+ CTTAACTACCCATCCATTACAGTGCCAGCCCTCATCCACAAGTTCTCGGTGACCAGAACT
rJMSF043K05+ CTTAACTACCCATCCATTACAGTGCCAGCCCTCATCCACAAGTTCTCGGTGACCAGAACT
____________________________________________________________
consensus CTTAACTACCCATCCATTACAGTGCCAGCCCTCATCCACAAGTTCTCGGTGACCAGAACT
. : . : . : . : . : . :
rJMSF019O10+ GTAACAAACGTGGGAGAGCCAAGAAGCTCATACAAGGCAGTCGTGTTTCCTCCAAGAGGA
rJMSF019I04+ GTAACAAACGTGGGAGAGCCAAGAAGCTCATACAAGGCAGTCGTGTTTCCTCCAAGAGGA
rJMFF013H03+ GTAACAAACGTGGGAGAGCCAAGAAGCTCATACAAGGCAGTCGTGTTTCCTCCAAGAGGA
rJMSF043K05+ GTAACAAACGTGGGAGAGCCAAGAAGCTCATACAAGGCAGTCGTGTTTCCTCCAAGAGGA
____________________________________________________________
consensus GTAACAAACGTGGGAGAGCCAAGAAGCTCATACAAGGCAGTCGTGTTTCCTCCAAGAGGA
. : . : . : . : . : . :
rJMSF019O10+ ATCAATGTGACTGTGGTGCCTAGACGACTCACCTTCAAGCATTACGGTCAGAAGCTTAAC
rJMSF019I04+ ATCAATGTGACTGTGGTGCCTAGACGACTCACCTTCAAGCATTACGGTCAGAAGCTTAAC
rJMFF013H03+ ATCAATGTGACTGTGGTGCCTAGACGACTCACCTTCAAGCATTACGGTCAGAAGCTTAAC
rJMSF043K05+ ATCAATGTGACTGTGGTGCCTAGACGACTCACCTTCAAGCATTACGGTCAGAAGCTTAAC
____________________________________________________________
consensus ATCAATGTGACTGTGGTGCCTAGACGACTCACCTTCAAGCATTACGGTCAGAAGCTTAAC
. : . : . : . : . : . :
rJMSF019O10+ TTCACCTTAAGTTTCAAGATGGCTGCCCCAACACAAGGCTATGTTTTTGGGTCATTCTCA
rJMSF019I04+ TTCACCTTAAGTTTCAAGATGGCTGCTCCAACACAAGGCTATGTTTTTGGGTCATTCTCA
rJMFF013H03+ TTCACCTTAAGTTTCAAGATGGCTGCTCCAACACAAGGCTATGTTTTTGGGTCATTCTCA
rJMSF043K05+ TTCACCTTAAGTTTCAAGATGGCTGCTCCAACACAAGGCTATGTTTTTGGGTCATTCTCA
____________________________________________________________
consensus TTCACCTTAAGTTTCAAGATGGCTGCTCCAACACAAGGCTATGTTTTTGGGTCATTCTCA
. : . : . : . : . : . :
rJMSF019O10+ TGGAGAAGCAAGAAGAACTGGGTAAGATCCCCTCTGGTTGTGAGAGTGGCAGGCTCCAGG
rJMSF019I04+ TGGAGAAGCAAGAAGAACTGGGTAAGATCCCCTCTGGTTGTGAGAGTGGCAGGCTCCAGG
rJMFF013H03+ TGGAGAAGCAAGAAGAACTGGGTAAGATCCCCTCTGGTTGTGAGAGTGGCAGGCTCCAGG
rJMSF043K05+ TGGAGAAGCAAGAAGAACTGGGTAAGATCCCCTCTGGTTGTGAGAGTGGCAGGCTCCAGG
____________________________________________________________
consensus TGGAGAAGCAAGAAGAACTGGGTAAGATCCCCTCTGGTTGTGAGAGTGGCAGGCTCCAGG
. : . : . : . : . : . :
rJMSF019O10+ ACGGGTCTTCCGGTGTAAAACACCTGGAAAAAAGATGATTAAGGATCAGATCATAGGAAG
rJMSF019I04+ ACGGGTCTTCCGGTGTAAAACACCTGGAAAAAAGATGATTAAGGATCAGATCATAGGAAG
rJMFF013H03+ ACGGGTCTTCCGGTGTAAAACACCTGGAAAAAAGATGATTAAGGATCAGATCATAGGAAG
rJMSF043K05+ ACGGGTCTTCCGGTGTAAAACACCTGGAAAAAAGATGATTAAGGATCAGATCATAGGAAG
____________________________________________________________
consensus ACGGGTCTTCCGGTGTAAAACACCTGGAAAAAAGATGATTAAGGATCAGATCATAGGAAG
. : . : . : . : . : . :
rJMSF019O10+ TAATAGTGGATCCAATGTCATTTATTTGTTGCAGAAACCAGAATTTAAGAATACATGTAA
rJMSF019I04+ TAATAGTGGATCCAATGTCATTTATTTGTTGCAGAAACCAGAATTTAAGAATACATGTAA
rJMFF013H03+ TAATAGTGGATCCAATGTCATTTATTTGTTGCAGAAACCAGAATTTAAGAATACATGTAA
rJMSF043K05+ TAATAGTGGATCCAATGTCATTTATTTGTTGCAGAAACCAGAATTTAAGAATACATGTAA
____________________________________________________________
consensus TAATAGTGGATCCAATGTCATTTATTTGTTGCAGAAACCAGAATTTAAGAATACATGTAA
. : . : . : . : . : . :
rJMSF019O10+ TTATATACAATTTATTCT
rJMSF019I04+ TTATATACAATTTATTCT
rJMFF013H03+ TTATATACAATTTATTCT
rJMSF043K05+ TTATATACAATTTATTCTTAAATCTTATTGTTTAATGATGTTTGGTTAATGTAAATCAAT
____________________________________________________________
consensus TTATATACAATTTATTCTTAAATCTTATTGTTTAATGATGTTTGGTTAATGTAAATCAAT