Contig 001462:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF036F06Sequence571001462 (9)ref|XP_009611505.1|4e-32PREDICTED: uncharacterized protein LOC104104985 isoform X1 [Nicotiana tomentosi737001462 (9)ref|XP_009799156.1|6e-75PREDICTED: uncharacterized protein LOC104245264 isoform X1 [Nicotiana sylvestri
JMSF018K21Sequence230001462 (9)757001462 (9)ref|XP_009799156.1|5e-74PREDICTED: uncharacterized protein LOC104245264 isoform X1 [Nicotiana sylvestri
JMSF030E06Sequence588001462 (9)ref|XP_009611506.1|2e-41PREDICTED: uncharacterized protein LOC104104985 isoform X2 [Nicotiana tomentosi774001462 (9)ref|XP_009799156.1|6e-74PREDICTED: uncharacterized protein LOC104245264 isoform X1 [Nicotiana sylvestri
JMSF041G04Sequence831015829611001462 (9)ref|XP_009799164.1|3e-41PREDICTED: uncharacterized protein LOC104245264 isoform X2 [Nicotiana sylvestri
JMSF043J07Sequence742001462 (9)ref|XP_009611506.1|4e-79PREDICTED: uncharacterized protein LOC104104985 isoform X2 [Nicotiana tomentosi745001462 (9)ref|XP_009799156.1|2e-65PREDICTED: uncharacterized protein LOC104245264 isoform X1 [Nicotiana sylvestri

Alignment

This contig is upended


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JMFF036F06- GC
                      ____________________________________________________________
consensus GC
 
. : . : . : . : . : . :
JMFF036F06- GGTGGGCGCCATTCATTTCTCAAGAGCACAGAAAGTATCAGAAAGAGAGGTCGATCATGG
JMSF030E06- AAGAGCACAGAAAGTATCAGAAAGAGAGGTCGATCATGG
JMSF018K21- AGAGCACAGAAAGTATCAGAAAGAGAGGTCGATCATGG
JMSF043J07- AAGAGCACAGAAAGTATCAGAAAGAGAGGTCGATCATGG
                      ____________________________________________________________
consensus GGTGGGCGCCATTCATTTCTCAAGAGCACAGAAAGTATCAGAAAGAGAGGTCGATCATGG
 
. : . : . : . : . : . :
JMFF036F06- CGATTTCGCTCAACTCTGTCGTGAGCTTGAATTCATCCCTGCAGGCAAACTACCAGCGTG
JMSF030E06- CGATTTCGCTCAACTCTGTCGTGAGCTTGAATTCATCC------GCAAACTACCAGCGTG
JMSF018K21- CGATTTCGCTCAACTCTGTCGTGAGCTTGAATTCATCC------GCAAACTACCAGCGTG
JMSF043J07- CGATTTCGCTCAACTCTGTCGTGAGCTTGAATTCATCC------GCAAACTACCAGCGTG
                      ____________________________________________________________
consensus CGATTTCGCTCAACTCTGTCGTGAGCTTGAATTCATCC------GCAAACTACCAGCGTG
 
. : . : . : . : . : . :
JMFF036F06- CATCAAAGGGAATCTCTGTGCAGAAGGCTCTCCAGTTGGCTTGTCCCTCACAGAAGGTGT
JMSF030E06- CATCAAAGGGAATCTCTGTGCAGAAGGCTCTCCAGTTGGCTTGTCCCTCACAGAAGGTGT
JMSF018K21- CATCAAAGGGAATCTCTGTGCAGAAGGCTCTCCAGTTGGCTTGTCCCTCACAGAAGGTGT
JMSF043J07- CATCAAAGGGAATCTCTGTGCAGAAGGCTCTCCAGTTGGCTTGTCCCTCACAGAAGGTGT
                      ____________________________________________________________
consensus CATCAAAGGGAATCTCTGTGCAGAAGGCTCTCCAGTTGGCTTGTCCCTCACAGAAGGTGT
 
. : . : . : . : . : . :
JMFF036F06- GGCTACGCAGGGATGTAAAGGAGACAAAGTGGAGTTTCAATCTCTTAGTTGCAAATACCG
JMSF030E06- GGTTACGCAGGGATGTAAAGGAGACAAAGTGGAGTTTCAATCTCTTAGTTGCAAATACCG
JMSF018K21- GGTTACGCAGGGATGTAAAGGAGACAAAGTGGAGTTTCAATCTCTTAGTTGCAAATACCG
JMSF043J07- GGTTACGCAGGGATGTAAAGGAGACAAAGTGGAGTTTCAATCTCTTAGTTGCAAATACCG
rJMSF030E06+ AAATACCG
                      ____________________________________________________________
consensus GGTTACGCAGGGATGTAAAGGAGACAAAGTGGAGTTTCAATCTCTTAGTTGCAAATACCG
 
. : . : . : . : . : . :
JMFF036F06- ATCGTGTTGAGACTGAGAGCTTAAATTCCTCTGTGGAGAATCCTTCACCGTCTGAGTCTT
JMSF030E06- ATCGTGTTGAGACTGAGAGCTTAAATTCCTCTGTGGAGAATCCTTCACCGTCTGAGTCTT
JMSF018K21- ATCGTGTTGAGACTGA
JMSF043J07- ATCGTGTTGAGACTGAGAGCTTAAATTCCTCTGTGGAGAATCCTTCACCGTCTGAGTCTT
rJMSF030E06+ ATCGTGTTGAGACTGAGAGCTT-AATTCCTCTGTGGAGAATCCTTCACCGTCTGAGTCTT
rJMFF036F06+ TT
                      ____________________________________________________________
consensus ATCGTGTTGAGACTGAGAGCTTAAATTCCTCTGTGGAGAATCCTTCACCGTCTGAGTCTT
 
. : . : . : . : . : . :
JMFF036F06- CAAGAATCGAGACTGAAGATCAACCTAGTGCTCAAGCTGATTCAGCTCCGGAAGGATCTG
JMSF030E06- CAAGAATCGAGACTGAAGATCAACCTAGTGCTCAAGCTGATTCAGCTCCGGAAGGATCTG
JMSF043J07- CAATAATCGAGACTGAAGATCAACCTAGTGCTCAAGCTGATTCAGCTCCGGAAGGATCTG
rJMSF030E06+ CAAGAATCGAGACTGAAGATCAACCTAGTGCTCAAGCTGATTCAGCTCCGGAAGGATCTG
rJMFF036F06+ CAAGAATCGAGACTGAAGATCAACNTAGTGCTCAAGCTGATTCAGCTCCGGAAGGATCTG
rJMSF018K21+ AAGAATCGAGACTGAAGATCAACCTAGTGCTCAAGCTGATTCAGCTCCGGAAGGATCTG
                      ____________________________________________________________
consensus CAAGAATCGAGACTGAAGATCAACCTAGTGCTCAAGCTGATTCAGCTCCGGAAGGATCTG
 
. : . : . : . : . : . :
JMFF036F06- ATGGTTCCAATGGATTACTAACTTCCAAAAACTTGAAAGAGGATGCGTCTTCTGTAACTA
JMSF030E06- ATGGTTCCAATGGATTACTAACTTCCAAAAACTTGAAAGAGGATGCGTCTTCTGTAACTA
JMSF043J07- ATGGTTCCAATGGATTACTAACTTCCAAAAACTTGAAAGAGGATGCGTCTTCTGTAACTA
rJMSF030E06+ ATGGTTCCAATGGATTACTAACTTCCAAAAACTTGAAAGAGGATGCGTCTTCTGTAACTA
rJMFF036F06+ ATGGTTCCAATGGATTACTAACTTCCAAAAACTTGAAAGAGGATGCGTCTTCTGTAACTA
rJMSF018K21+ ATGGTTCCAATGGATTACTAACTTCCAAAAACTTGAAAGAGGATGCGTCTTCTGTAACTA
rJMSF043J07+ AAAGAGGATGCGTCTTCTGTAACTA
                      ____________________________________________________________
consensus ATGGTTCCAATGGATTACTAACTTCCAAAAACTTGAAAGAGGATGCGTCTTCTGTAACTA
 
. : . : . : . : . : . :
JMFF036F06- CAAAGCCAGCCTTGAAAAGGTCTCCATTGACAGCTAGAGAAAAACTTAGGGCGGCTCGTG
JMSF030E06- CAAAGCCAGCCTTGAAAAGGTCTCCATTGACAGCTAGAGAAAAACTTAGGGCGGCTCGTG
JMSF043J07- CAAAGCCAGCCTTGAAAAGGTCTCCATTGACAGCTAGAGAAAAACTTAGGGCGGCTCGTG
rJMSF030E06+ CAAAGCCAGCCTTGAAAAGGTCTCCATTGACAGCTAGAGAAAAACTTAGGGCGGCTCGTG
rJMFF036F06+ CAAAGCCAGCCTTGAAAAGGTCTCCATTGACAGCTAGAGAAAAACTTAGGGCGGCTCGTG
rJMSF018K21+ CAAAGCCAGCCTTGAAAAGGTCTCCATTGACAGCTAGAGAAAAACTTAGGGCGGCTCGTG
rJMSF043J07+ CAAAGCCAGCCTTGAAAAGGTCTCCATTGACAGCTAGAGAAAAACTTAGGGCGGCTCGTG
                      ____________________________________________________________
consensus CAAAGCCAGCCTTGAAAAGGTCTCCATTGACAGCTAGAGAAAAACTTAGGGCGGCTCGTG
 
. : . : . : . : . : . :
JMFF036F06- TTCTTAGCCGTTACAATAATGAATCAAAAGCAGCCTCTAAACCAGATATGGGAAGCAAAC
JMSF030E06- TTCTTAGCCGTTACAATAATGAATCAAAAGCAGCCTCTAAACCAGATATGGGAAGCAAAC
JMSF043J07- TTCTTAGCCGTTACAATAATGAATCAAAAGCAGCCTCTAAACCAGATATGGGAAGCAAAC
rJMSF030E06+ TTCTTAGCCGTTACAATAATGAATCAAAAGCAGCCTCTAAACCAGATATGGGAAGCAAAC
rJMFF036F06+ TTCTTAGCCGTTACAATAATGAATCAAAAGCAGCCTCTAAACCAGATATGGGAAGCAAAC
rJMSF018K21+ TTCTTAGCCGTTACAATAATGAATCAAAAGCAGCCTCTAAACCAGATATGGGAAGCAAAC
rJMSF041G04+ AAAGCAGCCTCTAAACCAGATAT-GGAAGCAAAC
rJMSF043J07+ TTCTTAGCCGTTACAATAATGAATCAAAAGCAGCCTCTAAACCAGATATGGGAAGCAAAC
                      ____________________________________________________________
consensus TTCTTAGCCGTTACAATAATGAATCAAAAGCAGCCTCTAAACCAGATATGGGAAGCAAAC
 
. : . : . : . : . : . :
JMFF036F06- TACTTGAGGTTTTACGTGAGTCTGAAAAG
JMSF030E06- TACTTGAGGTTTTACGTGAGTCTGAAAAGGGTAAAAAAGGCCTTCCAGAGGCACCTAATA
JMSF043J07- TACTTGAGGTTTTACGTGAGTCTGAAAAGGGTAAAAAAGGCCTTCCAGAGGCACCTAATA
rJMSF030E06+ TACTTGAGGTTTTACGTGAGTCTGAAAAGGGTAAAAAAGGCCTTCCAGAGGCACCTAATA
rJMFF036F06+ TACTTGAGGTTTTACGTGAGTCTGAAAAGGGTAAAAAAGGCCTTCCAGAGGCACCTAATA
rJMSF018K21+ TACTTGAGGTTTTACGTGAGTCTGAAAAGGGTAAAAAAGGCCTTCCAGAGGCACCTAATA
rJMSF041G04+ TACTTGAGGTTTTACGTGAGTCTGAAAAGGGTAAAAAAGGCCTTCCAGAGGCACCTAATA
rJMSF043J07+ TACTTGAGGTTTTACGTGAGTCTGAAAAGGGTAAAAAAGGCCTTCCAGAGGCACCTAATA
                      ____________________________________________________________
consensus TACTTGAGGTTTTACGTGAGTCTGAAAAGGGTAAAAAAGGCCTTCCAGAGGCACCTAATA
 
. : . : . : . : . : . :
JMSF030E06- ATCTATTTGATGAT
JMSF043J07- ATCTATTTGATGATAGCAAAAGAGGGCTTCCAAAACCGGGCTGGACTTTCGAGCTTCCAG
rJMSF030E06+ ATCTATTTGATGATAGCAAAAGAGGGCTTCCAAAACCGGGCTGGACTTTCGAGCTTCCAG
rJMFF036F06+ ATCTATTTGATGATAGCAAAAGAGGGCTTCCAAAACCGGGCTGGACTTTCGAGCTTCCAG
rJMSF018K21+ ATCTATTTGATGATAGCAAAAGAGGGCTTCCAAAACCGGGCTGGACTTTCGAGCTTCCAG
rJMSF041G04+ ATCTATTTGATGGTAGCAAAAGAGGGCTTCCAAAACCGGGCTGGACTTTCGAGCTTCCAG
rJMSF043J07+ ATCTATTTGATGATAGCAAAAGAGGGCTTCCAAAACCGGGCTGGACTTTCGAGCTTCCAG
                      ____________________________________________________________
consensus ATCTATTTGATGATAGCAAAAGAGGGCTTCCAAAACCGGGCTGGACTTTCGAGCTTCCAG
 
. : . : . : . : . : . :
JMSF043J07- TAGGATTTGACGTGTTTCTCATTGCATTTTCATTTGTATTTATCAGCACAGTAATGTTCG
rJMSF030E06+ TAGGATTTGACGTGTTTCTCATTGCATTTTCATTTGTATTTATCAGCACAGTAATGTTCG
rJMFF036F06+ TAGGATTTGACGTGTTTCTCATTGCATTTTCATTTGTATTTATCAGCACAGTAATGTTCG
rJMSF018K21+ TAGGATTTGACGTGTTTCTCATTGCATTTTCATTTGTATTTATCAGCACAGTAATGTTCG
rJMSF041G04+ TAGGATTTGACGTGTTTCTCATTGCATTTTCATTTGTATTTATCAGCACAGTAATGTTCG
rJMSF043J07+ TAGGATTTGACGTGTTTCTCATTGCATTTTCATTTGTATTTATCAGCACAGTAATGTTCG
                      ____________________________________________________________
consensus TAGGATTTGACGTGTTTCTCATTGCATTTTCATTTGTATTTATCAGCACAGTAATGTTCG
 
. : . : . : . : . : . :
JMSF043J07- CCACAACATACATTGTGTGGAAAGTTGGTGCCATACATTTCAATGAGT
rJMSF030E06+ CCACAACATACATTGTGTGGAAAGTTGGTGCCATACATTTCAATGAGTATTAAGGGTGGT
rJMFF036F06+ CCACAACATACATTGTGTGGAAAGTTGGTGCCATACATTTCAATGAGTATTAAGGGTGGT
rJMSF018K21+ CCACAACATACATTGTGTGGAAAGTTGGTGCCATACATTTCAATGAGTATTAAGGGTGGT
rJMSF041G04+ CCACAACATACATTGTGTGGAAAGTTGGTGCCATACATTTCAATGAGTATTAAGGGTGGT
rJMSF043J07+ CCACAACATACATTGTGTGGAAAGTTGGTGCCATACATTTCAATGAGTATTAAGGGTGGT
                      ____________________________________________________________
consensus CCACAACATACATTGTGTGGAAAGTTGGTGCCATACATTTCAATGAGTATTAAGGGTGGT
 
. : . : . : . : . : . :
rJMSF030E06+ CTCACAGGTATCCTCTTTCCTTCTCCATTTTCTGGACAAGCAACCAAATTTTTGGTAGCA
rJMFF036F06+ CTCACAGGTATCCTCTTTCCTTCTCCATTTTCTGGACAAGCAACCAAATTTTTGGTAGCA
rJMSF018K21+ CTCACAGGTATCCTCTTTCCTTCTCCATTTTCTGGACAAGCAACCAAATTTTTGGTAGCA
rJMSF041G04+ CTCACAGGTATCCTCTTTCCTTCTCCATTTTCTGGACAAGCAACCAAATTTTTGGTAGCA
rJMSF043J07+ CTCACAGGTATCCTCTTTCCTTCTCCATTTTCTGGACAAGCAACCAAATTTTTGGTAGCA
                      ____________________________________________________________
consensus CTCACAGGTATCCTCTTTCCTTCTCCATTTTCTGGACAAGCAACCAAATTTTTGGTAGCA
 
. : . : . : . : . : . :
rJMSF030E06+ GAATTTAGGCACTATCAATGCTTTTCTTCCCATCGCCAACTTTTGTGTCTTTACGAAGAA
rJMFF036F06+ GAATTTAGGCACTATCAATGCTTTTCTTCCCATCGCCAACTTTTGTGTCTTTACGAAGAA
rJMSF018K21+ GAATTTAGGCACTATCAATGCTTTTCTTCCCATCGCCAACTTTTGTGTCTTTACGAAGAA
rJMSF041G04+ GAATTTAGGCACTATCAATGCTTTTCTTCCCATCGCCAACTTTTGTGTCTTTACGAAGAA
rJMSF043J07+ GAATTTAGGCACTATCAATGCTTTTCTTCCCATCGCCAACTTTTGTGTCTTTACGAAGAA
                      ____________________________________________________________
consensus GAATTTAGGCACTATCAATGCTTTTCTTCCCATCGCCAACTTTTGTGTCTTTACGAAGAA
 
. : . : . : . : . : . :
rJMSF030E06+ GTACTTGAAGGAGCCCCGATTTTTAAGTCGGAAGAAGGCCTGGGTGGGGGTTTGGAGTAA
rJMFF036F06+ GTACTTGAAGGAGCCCCGATTTTTAAGTCGGAAGAAGGCCTGGGTGGGGGTTTGGAGTAA
rJMSF018K21+ GTACTTGAAGGAGCCCCGATTTTTAAGTCGGAAGAAGGCCTGGGTGGGGGTTTGGAGTAA
rJMSF041G04+ GTACTTGAAGGAGCCCCGATTTTTAAGTCGGAAGAAGGCCTGGGTGGGGGTTTGGAGTAA
rJMSF043J07+ GTACTTGAAGGAGCCCCGATTTTTAAGTCGGAAGAAGGCCTGGGTGGGGGTTTGGAGTAA
                      ____________________________________________________________
consensus GTACTTGAAGGAGCCCCGATTTTTAAGTCGGAAGAAGGCCTGGGTGGGGGTTTGGAGTAA
 
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rJMSF030E06+ GGAAGGGATGGAGATCGAGATAGGCAAGACATACATCAGTGTACAAA
rJMFF036F06+ GGAAGGGATGGAGATCGAGATAGGCAAGATATACATCAGTGTACAAAATGGATCCAAAAC
rJMSF018K21+ GGAAGTGATGGAGATCGAGATAGGCAAGACATACATCAGTGTACAAAATGGATCCAAAAC
rJMSF041G04+ GGAAGGGATGGAGATCGAGATAGGCAAGACATACATCAGTGTACAAAATGGATCCAAAAC
rJMSF043J07+ GGAAGGGATGGAGATCGAGATAGGCAAGACATACATCAGTGTACAAAATGGATCCAAAAC
                      ____________________________________________________________
consensus GGAAGGGATGGAGATCGAGATAGGCAAGACATACATCAGTGTACAAAATGGATCCAAAAC
 
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rJMFF036F06+ TTATTAGTCAAAA
rJMSF018K21+ TTATTAGTCAAAATATTTTCATTTCTTGAATTCCTCTC
rJMSF041G04+ TTATTAGTCAAAATATTTTCATTTCTTGAATTCCTCTCTTTTCCTCTGTGTGATATGCAT
rJMSF043J07+ TTATTAGTCAAAATATTTTCATTTCTTGAATTCCTCTCTTTTCCTCTGTGTGATATGCAT
                      ____________________________________________________________
consensus TTATTAGTCAAAATATTTTCATTTCTTGAATTCCTCTCTTTTCCTCTGTGTGATATGCAT
 
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rJMSF041G04+ AA-CGGAGTATTTATCTTTTTAACTCCATTT
rJMSF043J07+ AANCGGAGTATTTATCTTTTTAACTCCATTTTGAAGGAGTCGAATGTTTAGCAATACACT
                      ____________________________________________________________
consensus AANCGGAGTATTTATCTTTTTAACTCCATTTTGAAGGAGTCGAATGTTTAGCAATACACT