Contig 001451:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF037A17Sequence521005246 (4)ref|XP_009775599.1|126PREDICTED: uncharacterized protein LOC104225490 [Nicotiana sylvestris] ref|XP_00707001451 (4)emb|CDP08657.1|2e-48unnamed protein product [Coffea canephora]
JMSF024G16Sequence677005246 (4)ref|XP_009775599.1|185PREDICTED: uncharacterized protein LOC104225490 [Nicotiana sylvestris] ref|XP_00775001451 (4)emb|CDP08657.1|1e-50unnamed protein product [Coffea canephora]
JMSF041B12Sequence563005246 (4)ref|XP_009775599.1|163PREDICTED: uncharacterized protein LOC104225490 [Nicotiana sylvestris] ref|XP_00625001451 (4)emb|CDP08657.1|5e-25unnamed protein product [Coffea canephora]
JMSF052O03Sequence640005246 (4)ref|XP_009775599.1|182PREDICTED: uncharacterized protein LOC104225490 [Nicotiana sylvestris] ref|XP_00939001451 (4)emb|CDP08657.1|7e-50unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF052O03+                              CCTAAAGCCCCGCTCTTCTGGACAGAAGAATATAAATACC
                      ____________________________________________________________
consensus                                 CCTAAAGCCCCGCTCTTCTGGACAGAAGAATATAAATACC
 
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rJMSF024G16+                          CTCTCGAGAAAAGTGTGTATCATAAACAGTGGGAAGAGCATTTG
rJMSF052O03+          CGGACACAAAGAAACACTCTCGAGAAAAGTGTGTATCATAAACAGTGGGAAGAGCATTTG
                      ____________________________________________________________
consensus             CGGACACAAAGAAACACTCTCGAGAAAAGTGTGTATCATAAACAGTGGGAAGAGCATTTG
 
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rJMSF024G16+          CAGCTTGGTACCAACACGCCATTGAGTGACTGCAACCAAAGACCTATGCCCGAAACAAAT
rJMFF037A17+                                           AACCAAAGACNTATGCCNGAAACAAAT
rJMSF052O03+          CAGCTTGGTACCAACACGCCATTGAGTGACTGCAACCAAAGACCTATGCCCGAAACAAAT
                      ____________________________________________________________
consensus             CAGCTTGGTACCAACACGCCATTGAGTGACTGCAACCAAAGACCTATGCCCGAAACAAAT
 
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rJMSF024G16+          GCAAACGATAACGATTCCAACAAGGCTCAAATCTTGGAAGCGCTCCGTCATTCTCAAACT
rJMFF037A17+          GCAAACGATAACGATTCCAACAAGGCTCAAATCTTGGAAGCGCTCCGTCATTCTCAAACT
rJMSF052O03+          GCAAACGATAACGATTCCAACAAGGCTCAAATCTTGGAAGCGCTCCGTCATTCTCAAACT
                      ____________________________________________________________
consensus             GCAAACGATAACGATTCCAACAAGGCTCAAATCTTGGAAGCGCTCCGTCATTCTCAAACT
 
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rJMSF024G16+          CGGGCAAGGCAGGCAGAGATCGCAGCAAAGAAAGCCTCCGCAGAAAAGGAGCGTGTTGTC
rJMFF037A17+          CGGGCAAGGCAGGCAGAGATCGCAGCAAAGAAAGCCTCCGCAGAAAAGGAGCGTGTTGTC
rJMSF052O03+          CGGGCAAGGCAGGCAGAGATCGCAGCAAAGAAAGCCTCCGCAGAAAAGGAGCGTGTTGTC
                      ____________________________________________________________
consensus             CGGGCAAGGCAGGCAGAGATCGCAGCAAAGAAAGCCTCCGCAGAAAAGGAGCGTGTTGTC
 
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rJMSF024G16+          GAGCTCATCTTCCGGCAAGCGTCGCAGCTTTTTGCCTACAAGCAATGGTTCCATCTTCTG
rJMFF037A17+          GAGCTCATCTTCCGGCAAGCGTCGCAGCTTTTTGCCTACAAGCAATGGTTCCATCTTCTG
rJMSF052O03+          GAGCTCATCTTCCGGCAAGCGTCGCAGCTTTTTGCCTACAAGCAATGGTTCCATCTTCTG
rJMSF041B12+                                                            CCATCTTCTG
                      ____________________________________________________________
consensus             GAGCTCATCTTCCGGCAAGCGTCGCAGCTTTTTGCCTACAAGCAATGGTTCCATCTTCTG
 
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rJMSF024G16+          CAACTCGAGAACCTCTACTTCCAGATCAAGAACAACACGAGCCAGCCGATATCCGGAATA
rJMFF037A17+          CAACTCGAGAACCTCTACTTCCAGATCAAGAACAACACGAGCCAGCCGATATCCGGAATA
rJMSF052O03+          CAACTCGAGAACCTCTACTTCCAGATCAAGAACAACACGAGCCAGCCGATATCCGGAATA
rJMSF041B12+          CAACTCGAGAACCTCTACTTCCAGATCAAGAACAACACGAGCCAGCCGATATCCGGAATA
                      ____________________________________________________________
consensus             CAACTCGAGAACCTCTACTTCCAGATCAAGAACAACACGAGCCAGCCGATATCCGGAATA
 
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rJMSF024G16+          TTTCCCGTAACGTTACCTTGGCTGCCTCAGAAAACAACGAAACAAAGGAAGAACTGGCAC
rJMFF037A17+          TTTCCCGTAACGTTACCTTGGCTGCCTCAGAAAACAACGAAACAAAGGAAGAACTGGCAC
rJMSF052O03+          TTTCCCGTAACGTTACCTTGGCTGCCTCAGAAAACAACGAAACAAAGGAAGAACTGGCAC
rJMSF041B12+          TTTCCCGTAACGTTACCTTGGCTGCCTCAGAAAACAACGAAACAAAGGAAGAACTGGCAC
                      ____________________________________________________________
consensus             TTTCCCGTAACGTTACCTTGGCTGCCTCAGAAAACAACGAAACAAAGGAAGAACTGGCAC
 
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rJMSF024G16+          AAATTTGCCAGAGGGAAACGGGAAAAGCGAGGCTGTCCTAATAAGTACGATTTCGGGAAG
rJMFF037A17+          AAATTTGCCAGAGGGAAACGGGAAAAGCGAGGCTGTCCTAATAAGTACGATTTCGGGAAG
rJMSF052O03+          AAATTTGCCAGAGGGAAACGGGAAAAGCGAGGCTGTCCTAATAAGTACGATTTCGGGAAG
rJMSF041B12+          AAATTTGCCAGAGGGAAACGGGAAAAGCGAGGCTGTCCTAATAAGTACGATTTCGGGAAG
                      ____________________________________________________________
consensus             AAATTTGCCAGAGGGAAACGGGAAAAGCGAGGCTGTCCTAATAAGTACGATTTCGGGAAG
 
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rJMSF024G16+          TATGCACTAATGTTTGCACTGGGTTTGAGTCTTGTTGGCGTGGGCGTGCTCCTCGGATGG
rJMFF037A17+          TATGCACTAATGTTTGCACTGGGTTTGAGTCTTGTTGGCGTGGGCGTGCTCCTCGGATGG
rJMSF052O03+          TATGCACTAATGTTTGCACTGGGTTTGAGTCTTGTTGGCGTGGGCGTGCTCCTCGGATGG
rJMSF041B12+          TATGCACTAATGTTTGCACTGGGTTTGAGTCTTGTTGGCGTGGGCGTGCTCCTCGGATGG
                      ____________________________________________________________
consensus             TATGCACTAATGTTTGCACTGGGTTTGAGTCTTGTTGGCGTGGGCGTGCTCCTCGGATGG
 
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rJMSF024G16+          ACTATAGGGTGGATGTTTCCGAGTTTCTGAGCTGCGTATCGTGCAGGTATTGTATCGAAT
rJMFF037A17+          ACTATAGGGTGGATGTTTCCGAGTTTCTGAGCTGCGTATCGTGCAGGTATTGTATCGAAT
rJMSF052O03+          ACTATAGGGTGGATGTTTCCGAGTTTCTGAGCTGCGTATCGTGCAGGTATTGTATCGAAT
rJMSF041B12+          ACTATAGGGTGGATGTTTCCGAGTTTCTGAGCTGCGTATCGTGCAGGTATTGTATCGAAT
                      ____________________________________________________________
consensus             ACTATAGGGTGGATGTTTCCGAGTTTCTGAGCTGCGTATCGTGCAGGTATTGTATCGAAT
 
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rJMSF024G16+          TTTTGTGCTTTTAGTGGTGGTTGTGTATATATTCAATCATGGGGGAGTTAGGATACTATA
rJMFF037A17+          TTTTGTGCTTTTAGTGGTGGTTGTGTATATATTCAATCACGGGGGAGTTAGGATACTATA
rJMSF052O03+          TTTTGTGCTTTTAGTGGTGGTTGTGTATATATTCAATCATGGGGGAGTTAGGATACTATA
rJMSF041B12+          TTTTGTGCTTTTAGTGGTGGTTGTGTATATATTCAATCATGGGGGAGTTAGGATACTATA
                      ____________________________________________________________
consensus             TTTTGTGCTTTTAGTGGTGGTTGTGTATATATTCAATCATGGGGGAGTTAGGATACTATA
 
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rJMSF024G16+          TATCTCACCATTTCTTTGGATGTGTTGATTCTATAGGTGTTTAGCTTCTCTCTTTGGTTT
rJMFF037A17+          TATCTCACCATTTCTTTGGATGTGTTGATTCTATAGGTGTTTAGCTTCTCTCTTTGGTTT
rJMSF052O03+          TATCTCACCATTTCTTTGGATGTGTTGATTCTATAGGTGTTTAGCTTCTCTCTTTGGTTT
rJMSF041B12+          TATCTCACCATTTCTTTGGATGTGTTGATTCTATAGGTGTTTAGCTTCTCTCTTTGGTTT
                      ____________________________________________________________
consensus             TATCTCACCATTTCTTTGGATGTGTTGATTCTATAGGTGTTTAGCTTCTCTCTTTGGTTT
 
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rJMSF024G16+          CTCAGATTTAGCTATGCAAATTTGCTTTGTATTGCATTAC                    
rJMFF037A17+          CTCAGATTTAGCTATGCAAATTTGCTTTGTATTGCATTACAAGATCTGTGGTGACAGTTG
rJMSF052O03+          CTCAGATTTAGCTATGCAAATTTGCTTTGTATTGCATTACAAGATCTGTGGTGACAGTTG
rJMSF041B12+          CTCAGATTTAGCTATGCAAATTTGCTTTGTATTGCATTACAAGATCTGTGGTGACAGTTG
                      ____________________________________________________________
consensus             CTCAGATTTAGCTATGCAAATTTGCTTTGTATTGCATTACAAGATCTGTGGTGACAGTTG
 
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rJMFF037A17+          TATGTATATATTTGTGACTC                                        
rJMSF052O03+          TATGTATATATTTGTGACTCAAATCTTATGGAATTTGTTCAATTCTGACATGATTGCAAA
rJMSF041B12+          TATGTATATATTTGTGACTCAAATCTTATGGAATTTGTTCAATTCTGACATGATTGCAAA
                      ____________________________________________________________
consensus             TATGTATATATTTGTGACTCAAATCTTATGGAATTTGTTCAATTCTGACATGATTGCAAA
 
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rJMSF052O03+          TTTCCAATGTTGGTCACATAGTGAGTAGTGA-CACTAGATATATTACTCCGTAGGAAAAA
rJMSF041B12+          TTTCCAATGTTGGTCACATAGTGAGTAGTGACCACTAGATATATTACTCCGTAGGAAAAA
                      ____________________________________________________________
consensus             TTTCCAATGTTGGTCACATAGTGAGTAGTGACCACTAGATATATTACTCCGTAGGAAAAA