Contig 001447:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF040J03Sequence678005313 (3)ref|XP_006339418.1|4e-73PREDICTED: BTB/POZ and MATH domain-containing protein 2-like isoform X1 [Solanu835001447 (2)ref|XP_009787612.1|2e-77PREDICTED: BTB/POZ and MATH domain-containing protein 2-like [Nicotiana sylvest
JMSF051F10Sequence677005313 (3)ref|XP_006339418.1|1e-56PREDICTED: BTB/POZ and MATH domain-containing protein 2-like isoform X1 [Solanu731001447 (2)ref|XP_009621647.1|2e-56PREDICTED: BTB/POZ and MATH domain-containing protein 2-like [Nicotiana tomento

Alignment

This contig is upended


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rJMSF040J03+               TGCTGAAGGAAGAGGACACACAATATGTTAAAGTTGAAGAAGTGCAATCTCCGGT
                      ____________________________________________________________
consensus                  TGCTGAAGGAAGAGGACACACAATATGTTAAAGTTGAAGAAGTGCAATCTCCGGT
 
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rJMSF051F10+                                                          ACAAGAATTTGT
rJMSF040J03+          TTTTAAGGCATTGCTCCACTATATATATTGGGATGTGCTTCCTGATTTACAAGAATTTGT
                      ____________________________________________________________
consensus             TTTTAAGGCATTGCTCCACTATATATATTGGGATGTGCTTCCTGATTTACAAGAATTTGT
 
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rJMSF051F10+          GGGTCTTGAAACTACGGGGGCAGCCACACTGATGGCACAGCATTTGCTTGCTGCAGCAGA
rJMSF040J03+          GGGTCTTGAAACTACGGGGGCAGCCACACTGATGGCACAGCATTTGCTTGCTGCAGCAGA
                      ____________________________________________________________
consensus             GGGTCTTGAAACTACGGGGGCAGCCACACTGATGGCACAGCATTTGCTTGCTGCAGCAGA
 
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rJMSF051F10+          CCGATATGGACTTGAGAGGCTGAAAGTGCTATGTGAGGCTAAACTTACGGAGGGTGTATC
rJMSF040J03+          CCGATATGGACTTGAGAGGCTGAAAGTGCTATGTGAGGCTAAACTTACGGAGGGTGTATC
                      ____________________________________________________________
consensus             CCGATATGGACTTGAGAGGCTGAAAGTGCTATGTGAGGCTAAACTTACGGAGGGTGTATC
 
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rJMSF051F10+          CATCAATACAGTTGCCACGACCTTAGCTTTGGCTGATCAGCATCAATGTGTCCAACTGAA
rJMSF040J03+          CATCAATACAGTTGCCACGACCTTAGCTTTGGCTGATCAGCATCAATGTGTCCAACTGAA
                      ____________________________________________________________
consensus             CATCAATACAGTTGCCACGACCTTAGCTTTGGCTGATCAGCATCAATGTGTCCAACTGAA
 
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rJMSF051F10+          ATCTGTTTGTCTGAAATTCATTGCTTCATCTGAAAATTTGAAAGCTGTGATGGAGACAGA
rJMSF040J03+          ATCTGTTTGTCTGAAATTCATTGCTTCATCTGAAAATTTGAAAGCTGTGATGGAGACAGA
                      ____________________________________________________________
consensus             ATCTGTTTGTCTGAAATTCATTGCTTCATCTGAAAATTTGAAAGCTGTGATGGAGACAGA
 
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rJMSF051F10+          AGGATTTGAACACTTAAAGGAGAGCTGCCCTGCTGTCATCACCGAGCTGCTTAATTACGT
rJMSF040J03+          AGGATTTGAACACTTAAAGGAGAGCTGCCCTGCTGTCATCACCGAGCTGCTTAATTACGT
                      ____________________________________________________________
consensus             AGGATTTGAACACTTAAAGGAGAGCTGCCCTGCTGTCATCACCGAGCTGCTTAATTACGT
 
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rJMSF051F10+          GGCTAAGGTAGGTCCACCACCAGGGACAACCATTGAGCGGGGTGTAATCACACTTGATGG
rJMSF040J03+          GGCTAAGGTAGGTCCACCACCAGGGACAACCATTGAGCGGGGTGTAATCACACTTGATGG
                      ____________________________________________________________
consensus             GGCTAAGGTAGGTCCACCACCAGGGACAACCATTGAGCGGGGTGTAATCACACTTGATGG
 
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rJMSF051F10+          CGGTGATGTGCATGGAAGAAGAGTAAAGCAGAGGTTACAGTTACAGGCGTCATAGTAATC
rJMSF040J03+          CGGTGATGTGCATGGAAGAAGAGTAAAGCAGAGGTTACAGTTACAGGCGTCATAGTAATC
                      ____________________________________________________________
consensus             CGGTGATGTGCATGGAAGAAGAGTAAAGCAGAGGTTACAGTTACAGGCGTCATAGTAATC
 
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rJMSF051F10+          TGTTGCAGCGACATCATTCGGTTACAGCTGACTCGATCTGTGATCTTGACTACTAGTGCC
rJMSF040J03+          TGTTGCAGCGACATCATTCGGTTACAGCTGACTCGATCTGTGATCTTGACTACTAGTGCC
                      ____________________________________________________________
consensus             TGTTGCAGCGACATCATTCGGTTACAGCTGACTCGATCTGTGATCTTGACTACTAGTGCC
 
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rJMSF051F10+          AGGACCAAAAAAAGAGGAAAGCAATTGCCTTTGAGTTAGAATCTCATGATTTCCATCATT
rJMSF040J03+          AGGACCAAAAAAAGAGGAAAGCAATTGCCTTTGAGTTAGAATCTCATGATTTCCATCATT
                      ____________________________________________________________
consensus             AGGACCAAAAAAAGAGGAAAGCAATTGCCTTTGAGTTAGAATCTCATGATTTCCATCATT
 
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rJMSF051F10+          AGCTCCACGGCTCTCTCCGAATACAAAAATGATGAAAAAGAAAGTGCAATATAATGTACT
rJMSF040J03+          AGCTCCACGGCTCTCTCCGAATACAAAAATGATGAAAAAGAAAGTGCAATATAATGTACT
                      ____________________________________________________________
consensus             AGCTCCACGGCTCTCTCCGAATACAAAAATGATGAAAAAGAAAGTGCAATATAATGTACT
 
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rJMSF051F10+          AATGGAAGAATTTGGACCATTTGGTTTGTAGTTTCTGTTATATTGATACAAATTCAGTTT
rJMSF040J03+          AATGGAAGAATTTGGACCATTTGGTTTGTAGTTTCTGTTATATTGATACAAATTCAGTTT
                      ____________________________________________________________
consensus             AATGGAAGAATTTGGACCATTTGGTTTGTAGTTTCTGTTATATTGATACAAATTCAGTTT
 
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rJMSF051F10+          CATAACATGAATGCTACGGGAAGTGACCAAAAATCAATTGGTTTACTTCAC         
rJMSF040J03+          CATAACATGAATGCTACGGGAAGTGACCAAAAATCAATTGGTTTACTTCACCAATATGTT
                      ____________________________________________________________
consensus             CATAACATGAATGCTACGGGAAGTGACCAAAAATCAATTGGTTTACTTCACCAATATGTT