Contig 001446:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF018M17+                                   TCGGACATATGTCCATGAGAGTGTCTATGATGAAT
rJMSF039H21+             GACAATGTTGCTGTGCTGGATCTCGGACATATGTCCATGAGAGTGTCTATGATGAAT
                      ____________________________________________________________
consensus                GACAATGTTGCTGTGCTGGATCTCGGACATATGTCCATGAGAGTGTCTATGATGAAT
 
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rJMSF018M17+          TTGTGGAGAAAGCAAAGGCACGTGCTTTAAAACGTGCAGTTGGTGATCCATTCCTGGCAA
rJMSF039H21+          TTGTGGAGAAAGCAAAGGCACGTGCTTTAAAACGTGCAGTTGGTGATCCATTCCTGGCAA
                      ____________________________________________________________
consensus             TTGTGGAGAAAGCAAAGGCACGTGCTTTAAAACGTGCAGTTGGTGATCCATTCCTGGCAA
 
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rJMSF018M17+          ATACAGAACAAGGTCCTCAGATTGATTCGGAACAATTTGAAAAGATCCTGAAGTATATTA
rJMSF039H21+          ATACAGAACAAGGTCCTCAGATTGATTCGGAACAATTTGAAAAGATCCTGAAGTATATTA
                      ____________________________________________________________
consensus             ATACAGAACAAGGTCCTCAGATTGATTCGGAACAATTTGAAAAGATCCTGAAGTATATTA
 
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rJMSF018M17+          AACTCGGCGTTGAAGGTGGAGCTACACTTGAAGCGGGGGGCGATAGACTAGGTACTAAGG
rJMSF039H21+          AACTCGGCGTTGAAGGTGGAGCTACACTTGGAGCGGGGGGCGATAGACTAGGTACTAAGG
                      ____________________________________________________________
consensus             AACTCGGCGTTGAAGGTGGAGCTACACTTGGAGCGGGGGGCGATAGACTAGGTACTAAGG
 
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rJMSF018M17+          GCTACTACATTAAGCCAACAGTTTTCTCCAATGTCAAGGATAATATGTTGATAGCAACGG
rJMSF039H21+          GCTACTACATTAAGCCAACAGTTTTCTCCAATGTCAAGGATAATATGTTGATAGCAACGG
                      ____________________________________________________________
consensus             GCTACTACATTAAGCCAACAGTTTTCTCCAATGTCAAGGATAATATGTTGATAGCAACGG
 
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rJMSF018M17+          ATGAGATCTTTGGTCCAGTACAGTCGATCTTGAAATTCAGTGATCTCGATGATGTGGTCC
rJMSF039H21+          ATGAGATCTTTGGTCCAGTACAGTCGATCTTGAAATTCAGTGATCTCGATGATGTGGTCC
                      ____________________________________________________________
consensus             ATGAGATCTTTGGTCCAGTACAGTCGATCTTGAAATTCAGTGATCTCGATGATGTGGTCC
 
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rJMSF018M17+          GGAGAGCAAATGCCTCCCGGTATGGTCTAGCTGCAGGGGTCTTCACACAGAACATTGACA
rJMSF039H21+          GGAGAGCAAATGCCTCCCGGTATGGTCTAGCTGCAGGGGTCTTCACACAGAACATTGACA
                      ____________________________________________________________
consensus             GGAGAGCAAATGCCTCCCGGTATGGTCTAGCTGCAGGGGTCTTCACACAGAACATTGACA
 
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rJMSF018M17+          CCGCAAACACTTTGACCCGAGCATTGAGAGTGGGGACTGTATGGATTAACTGCTTCGACA
rJMSF039H21+          CCGCAAACACTTTGACCCGAGCATTGAGAGTGGGGACTGTATGGATTAACTGCTTCGACA
                      ____________________________________________________________
consensus             CCGCAAACACTTTGACCCGAGCATTGAGAGTGGGGACTGTATGGATTAACTGCTTCGACA
 
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rJMSF018M17+          CCTTTGATGCAGCGATTCCTTTCGGTGGATATAAGATGAGTGGACAAGGAAGAGAAAAGG
rJMSF039H21+          CCTTTGATGCAGCGATTCCTTTCGGTGGATATAAGATGAGTGGACAAGGAAGAGAAAAGG
                      ____________________________________________________________
consensus             CCTTTGATGCAGCGATTCCTTTCGGTGGATATAAGATGAGTGGACAAGGAAGAGAAAAGG
 
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rJMSF018M17+          GAGAATACAGTCTGAAGAACTACTTGCAGGTTAAGGCGGTCGTCACGCCATTGACAAACC
rJMSF039H21+          GAGAATACAGTCTGAAGAACTACTTGCAGGTTAAGGCGGTCGTCACGCCATTGACAAACC
                      ____________________________________________________________
consensus             GAGAATACAGTCTGAAGAACTACTTGCAGGTTAAGGCGGTCGTCACGCCATTGACAAACC
 
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rJMSF018M17+          CTGCATGGTTATGATCATCCTCTCCTCATGATCAATAAGGAGATGAGCAGTATCATACAT
rJMSF039H21+          CTGCATGGTTATGATCATCCTCTCCTCATGATCAATAAGGAGAT-AGCAGTATCATACAT
                      ____________________________________________________________
consensus             CTGCATGGTTATGATCATCCTCTCCTCATGATCAATAAGGAGATGAGCAGTATCATACAT
 
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rJMSF018M17+          TGTTTCAATAACGATGATGATGATAATGTTATCTTGCCCCTGCTTCTATATTACCTATGT
rJMSF039H21+          TGTTTCAATAACGATGATGATGATAATGTTATCTTGCCCCTGCTTCTATATTACCTATGT
                      ____________________________________________________________
consensus             TGTTTCAATAACGATGATGATGATAATGTTATCTTGCCCCTGCTTCTATATTACCTATGT
 
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rJMSF018M17+          TTCTTGAGTATACTTAGTAAAGACTCCTTC                              
rJMSF039H21+          TTCTTGAGTATACTTAGTAAAGACTCCTTCAGTGACATATTTTTATAGTCTCTTACTGGA
                      ____________________________________________________________
consensus             TTCTTGAGTATACTTAGTAAAGACTCCTTCAGTGACATATTTTTATAGTCTCTTACTGGA
 
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rJMSF039H21+          ATGTTACTGGTTCTTGTGCCTGCTTGCTTCTTTGATGCTCGCTCTGTACCAGCCTATACT
                      ____________________________________________________________
consensus             ATGTTACTGGTTCTTGTGCCTGCTTGCTTCTTTGATGCTCGCTCTGTACCAGCCTATACT