Contig 001443:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF023L24Sequence693010708 (3)ref|XP_006368037.1|1e-61PREDICTED: aspartic proteinase-like protein 1-like [Solanum tuberosum]757001443 (3)ref|XP_009804210.1|4e-83PREDICTED: aspartic proteinase-like protein 1 isoform X2 [Nicotiana sylvestris]
JMSF027P23Sequence665010708 (3)ref|XP_006368037.1|3e-62PREDICTED: aspartic proteinase-like protein 1-like [Solanum tuberosum]640001443 (3)ref|XP_009804210.1|9e-71PREDICTED: aspartic proteinase-like protein 1 isoform X2 [Nicotiana sylvestris]
JMSF039A08Sequence694010708 (3)ref|XP_009804209.1|8e-72PREDICTED: aspartic proteinase-like protein 1 isoform X1 [Nicotiana sylvestris]825001443 (3)ref|XP_009606652.1|8e-102PREDICTED: aspartic proteinase-like protein 1 isoform X2 [Nicotiana tomentosifo

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF039A08+ GGTTCCACATTCATTCTCTTTATGNTTTGACCAGAGCCATTCTGG
                      ____________________________________________________________
consensus GGTTCCACATTCATTCTCTTTATGNTTTGACCAGAGCCATTCTGG
 
. : . : . : . : . : . :
rJMSF023L24+ GAAATCAAAGATTTACCCCC-TTTTGCCACC
rJMSF039A08+ GAGAATTTTCTTTGGTGATCAAGGGCCTGGAAATCAAAGATTTACCCCCTTTTTGCCACT
                      ____________________________________________________________
consensus GAGAATTTTCTTTGGTGATCAAGGGCCTGGAAATCAAAGATTTACCCCCTTTTTGCCACT
 
. : . : . : . : . : . :
rJMSF023L24+ TGAAGGGAATTATAACAAATACATTGTGGAGGTGGAACATTATTGCGTTGAGAGTTCCTG
rJMSF039A08+ TGAAGGGAATTATAACAAATACATTGTGGAGGTGGAACATTATTGCGTTGAGAGTTCCTG
                      ____________________________________________________________
consensus TGAAGGGAATTATAACAAATACATTGTGGAGGTGGAACATTATTGCGTTGAGAGTTCCTG
 
. : . : . : . : . : . :
rJMSF023L24+ TTTAAAGCAATCTGGATTTCGAGCACAAGTTGATAGTGGTTCATCTTTCACTCTCCTACC
rJMSF027P23+ TCTGGATTTCGAGCACAAGTTGATAGTGGTTCATCTTTCACTCTCCTACC
rJMSF039A08+ TTTAAAGCAATCTGGATTTCGAGCACAAGTTGATAGTGGTTCATCTTTCACTCTCCTACC
                      ____________________________________________________________
consensus TTTAAAGCAATCTGGATTTCGAGCACAAGTTGATAGTGGTTCATCTTTCACTCTCCTACC
 
. : . : . : . : . : . :
rJMSF023L24+ ATACGAGACCTATAAGAAAGTTGTTAATAAGTTTGATGAACTAATGAATGCTACAAGGTC
rJMSF027P23+ ATACGAGACCTATAAGAAAGTTGTTAATAAGTTTGATGAACTAATGAATGCTACAAGGTC
rJMSF039A08+ ATACGAGACCTATAAGAAAGTTGTTAATAAGTTTGATGAACTAATGAATGCTACAAGGTC
                      ____________________________________________________________
consensus ATACGAGACCTATAAGAAAGTTGTTAATAAGTTTGATGAACTAATGAATGCTACAAGGTC
 
. : . : . : . : . : . :
rJMSF023L24+ TAGCATAGATGTCTTTCACTACTGCTACAAGGCTCGTTCAGAGGGTTTACCAAATATTCC
rJMSF027P23+ TAGCATAGATGTCTTTCACTACTGCTACAAGGCTCGTTCAGAGGGTTTACCAAATATTCC
rJMSF039A08+ TAGCATAGATGTCTTTCACTACTGCTACAAGGCTCGTTCAGAGGGTTTACCAAATATTCC
                      ____________________________________________________________
consensus TAGCATAGATGTCTTTCACTACTGCTACAAGGCTCGTTCAGAGGGTTTACCAAATATTCC
 
. : . : . : . : . : . :
rJMSF023L24+ CAGTATGAAGCTCATCCTTTCTGCCAACCAGAGTTTTGTGATTCAAAATCCCATGTTTCC
rJMSF027P23+ CAGTATGAAGCTCATCCTTTCTGCCAACCAGAGTTTTGTGATTCAAAATCCCATGTTTCC
rJMSF039A08+ CAGTATGAAGCTCATCCTTTCTGCCAACCAGAGTTTTGTGATTCAAAATCCCATGTTTCC
                      ____________________________________________________________
consensus CAGTATGAAGCTCATCCTTTCTGCCAACCAGAGTTTTGTGATTCAAAATCCCATGTTTCC
 
. : . : . : . : . : . :
rJMSF023L24+ TATCCTCAACTATCAGGGAGTCAAATGTTACTGTTTAGGTGTACTGCCAATTGAAGGAAT
rJMSF027P23+ TATCCTCAACTATCAGGGAGTCAAATGTTACTGTTTAGGTGTACTGCCAATTGAAGGAAT
rJMSF039A08+ TATCCTCAACTATCAGGGAGTCAAATGTTACTGTTTAGGTGTACTGCCAATTGAAGGAAT
                      ____________________________________________________________
consensus TATCCTCAACTATCAGGGAGTCAAATGTTACTGTTTAGGTGTACTGCCAATTGAAGGAAT
 
. : . : . : . : . : . :
rJMSF023L24+ ATATGGATTAATTGGACAAAACTTTATGACTGGATACCGGATGGTATTTGATTGGGAGAA
rJMSF027P23+ ATATGGATTAATTGGACAAAACTTTATGACTGGATACCGGATGGTATTTGATTGGGAGAA
rJMSF039A08+ ATATGGATTAATTGGACAAAACTTTATGACTGGATACCGGATGGTATTTGATTGGGAGAA
                      ____________________________________________________________
consensus ATATGGATTAATTGGACAAAACTTTATGACTGGATACCGGATGGTATTTGATTGGGAGAA
 
. : . : . : . : . : . :
rJMSF023L24+ TTTGAAGTTGGGTTGGTCTGCTTCTAATTGTAAAGATTTGGATGATAATGATAAGGTTCC
rJMSF027P23+ TTTGAAGTTGGGTTGGTCTGCTTCTAATTGTAAAGATTTGGATGATAATGATAAGGTTCC
rJMSF039A08+ TTTGAAGTTGGGTTGGTCTGCTTCTAATTGTAAAGATTTGGATGATAATGATAAGGTTCC
                      ____________________________________________________________
consensus TTTGAAGTTGGGTTGGTCTGCTTCTAATTGTAAAGATTTGGATGATAATGATAAGGTTCC
 
. : . : . : . : . : . :
rJMSF023L24+ TGTAACGCCTACCCCAGGCGGTTTATCAGCAAGTCCATTGCCAACAAACGAGCAGCAGAG
rJMSF027P23+ TGTAACGCCTACCCCAGGCGGTTTATCAGCAAGTCCATTGCCAACAAACGAGCAGCAGAG
rJMSF039A08+ TGTAACGCCTACCCCAGGCGGTTTATCAGCAAGTCCATTGCCAACAAACGAGCAGCAGAG
                      ____________________________________________________________
consensus TGTAACGCCTACCCCAGGCGGTTTATCAGCAAGTCCATTGCCAACAAACGAGCAGCAGAG
 
. : . : . : . : . : . :
rJMSF023L24+ AACCCCCAACGGTCATGCAGTCGCCCCTGCCCTCGCTGGTAGGGCTCCTCCAAGACCATC
rJMSF027P23+ AACCCCCAACGGTCATGCAGTCGCCCCTGCCCTCGCTGGTAGGGCTCCTCCAAGACCATC
rJMSF039A08+ AACCCCCAACGGTCATGCAGTCGCCCCTGCCCTCGCTGGTAGGGCTCCTCCAAGACCATC
                      ____________________________________________________________
consensus AACCCCCAACGGTCATGCAGTCGCCCCTGCCCTCGCTGGTAGGGCTCCTCCAAGACCATC
 
. : . : . : . : . : . :
rJMSF023L24+ TGCAGCATCACCTTGTACCATTCACTATCAGCATTGTACTCTGATTCTGATTCTGCTTAT
rJMSF027P23+ TGCAGCATCACCTTGTACCATTCACTATCAGCATTGTACTCTGATTCTGATTCTGCTTAT
rJMSF039A08+ TGCAGCATCACCTTGTACCATTCACTATCAGCATTGTACTCTGATTCTGATTCTGCTTAT
                      ____________________________________________________________
consensus TGCAGCATCACCTTGTACCATTCACTATCAGCATTGTACTCTGATTCTGATTCTGCTTAT
 
. : . : . : . : . : . :
rJMSF023L24+ GCTACAATCATTCGTATGGTTATGTTGCCTGGTTTGATATCTGTGTGCTG
rJMSF027P23+ GCTACAATCATTCGTATGGTTATGTTGCCTGGTTTGATATCTGTGTGCTG
rJMSF039A08+ GCTACAATCATTCGTATGGTTATGTTGCCTGGTTTGATATCTGTGTGCTGGTGTATTTAT
                      ____________________________________________________________
consensus GCTACAATCATTCGTATGGTTATGTTGCCTGGTTTGATATCTGTGTGCTGGTGTATTTAT