Contig 001442:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017G11Sequence108016269571001442 (5)gb|KDP47007.1|2e-42hypothetical protein JCGZ_10734 [Jatropha curcas]
JMFN033H15Sequence572001442 (5)gb|KDP47007.1|2e-52hypothetical protein JCGZ_10734 [Jatropha curcas]
JMSF004P16Sequence197003540 (11)326001442 (5)
JMSF032N21Sequence650010830 (7)ref|XP_009801502.1|2e-118PREDICTED: delta(24)-sterol reductase-like isoform X1 [Nicotiana sylvestris] re538001442 (5)gb|ABD60147.1|3e-43diminuto [Morus alba]
JMSF038O20Sequence655010830 (7)ref|XP_009801502.1|3e-82PREDICTED: delta(24)-sterol reductase-like isoform X1 [Nicotiana sylvestris] re678001442 (5)gb|EYU19065.1|6e-74hypothetical protein MIMGU_mgv1a003798mg [Erythranthe guttata] gb|EYU19066.1| hy

Alignment

This contig is upended


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rJMSF038O20+                                                   TTTGCCCACACAGACTATA
                      ____________________________________________________________
consensus                                                      TTTGCCCACACAGACTATA
 
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rJMSF038O20+          CAGGCTCCCGATCAAGACCATGGTGTACCCCGAGCCAGGATTTGAGCTGCACCGCAGGCA
                      ____________________________________________________________
consensus             CAGGCTCCCGATCAAGACCATGGTGTACCCCGAGCCAGGATTTGAGCTGCACCGCAGGCA
 
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rJMFF017G11+                             CAGATGTACNCTGACGTTGGTGTTTNCTATACACCTGCCTC
rJMSF032N21+                             CAGATGTACACTGACGTTGGTGTNTACTATACACCTGCCTC
JMFN033H15-                              CAGATGTACACTGACGTTGGTGTCTACTATACACCTGCCTC
rJMSF038O20+          GGGCGATACACATTACGCTCAGATGTACACTGACGTTGGTGTCTACTATACACCTGCCTC
                      ____________________________________________________________
consensus             GGGCGATACACATTACGCTCAGATGTACACTGACGTTGGTGTCTACTATACACCTGCCTC
 
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rJMFF017G11+          CGTNTTTAGAGGNGAAGTGTTTGATGGTTCATTGGCTGTGCAACGAATGGAGGAGTGGTT
rJMSF032N21+          CGTCTTTAGAGGCGAAGTGTTTGATGGTTCATTGGCTGTGCAACGAATGGAGGAGTGGTT
JMFN033H15-           CGTCTTTAGAGGCGAAGTGTTTGATGGTTCATTGGCTGTGCAACGAATGGAGGAGTGGTT
rJMSF038O20+          CGTCTTTAGAGGCGAAGTGTTTGATGGTTCATTGGCTGTGCAACGAATGGAGGAGTGGTT
                      ____________________________________________________________
consensus             CGTCTTTAGAGGCGAAGTGTTTGATGGTTCATTGGCTGTGCAACGAATGGAGGAGTGGTT
 
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rJMFF017G11+          GATTGAGAACCNCGGTTTCCAGCCNCAATATGCTGTGTTTGAGTTGACCGAGAAGAACTT
rJMSF032N21+          GATTGAGAACCNCGGTTTCCAGCCNCAATATGCTGTGTNTGAGTTGACCGAGAAGAACTT
JMFN033H15-           GATTGAGAACCACGGTTTCCAGCCACAATATGCTGTGTCTGAGTTGACCGAGAAGAACTT
rJMSF038O20+          GATTGAGAACCNCGGTTTCCAGCCNCAATATGCTGTGTCTGAGTTGACCGAGAAGAACTT
                      ____________________________________________________________
consensus             GATTGAGAACCACGGTTTCCAGCCACAATATGCTGTGTCTGAGTTGACCGAGAAGAACTT
 
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rJMFF017G11+          TTGGAGGATGTTTGATGCTGGGCTNTACGAGCNCTGCAGACGCAAGTATAAGGCCGTGGG
rJMSF032N21+          NTGGAGGATGTTTGATGCTGGGCTNTACGAGCNCTGCAGACGCAAGTATAAGGCCGTGGG
JMFN033H15-           CTGGAGGATGTTTGATGCTGGGCTCTACGAGCACTGCAGACGCAAGTATAAGGCCGTGGG
rJMSF038O20+          CTGGAGGATGTTTGATGCTGGGCTCTACGAGCNCTGCAGACGCAAGTATAAGGCCGTGGG
                      ____________________________________________________________
consensus             CTGGAGGATGTTTGATGCTGGGCTCTACGAGCACTGCAGACGCAAGTATAAGGCCGTGGG
 
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rJMFF017G11+          CNCCTTCATGAGCGTGTNCTNCAAATNGAAGAAAGGAAGGAAGACCGAGAAGGAGGTGCA
rJMSF032N21+          CNCCTTCATGAGCGTGTACTACAAATCGAAGAAAGGAAGGAAGACCGAGAAGGAGGTGCN
rJMSF004P16+                                AAATCGAAGAAAGGAAGGAAGACCGAGAAGGAGGTGCA
JMFN033H15-           CACCTTCATGAGCGTGTACTACAAATCGAAGAAAGGAAGGAAGACCGAGAAGGAGGTGCA
rJMSF038O20+          CACCTTCATGAGCGTGTACTACAAATCGAAGAAAGGAAGGAAGACCGAGAAGGAGGTGCA
                      ____________________________________________________________
consensus             CACCTTCATGAGCGTGTACTACAAATCGAAGAAAGGAAGGAAGACCGAGAAGGAGGTGCA
 
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rJMFF017G11+          GGATGCCGAGAAAGAGAAAGCTGAAGTCGAGACCCCTGATTGTGATTAGTGTTTTGCATC
rJMSF032N21+          GGATGCCGAGAAAGAGAAAGCTGAAGTCGAGACCCCTGATTGTGATTAGTGTTTTGCATC
rJMSF004P16+          GGATGCCGAGAAAGAGAAAGCTGAAGTCGAGACCCCTGATTGNGATTAGTGTTTTGCATC
JMFN033H15-           GGATGCCGAGAAAGAGAAAGCTGAAGTCGAGACCCCTGATTGTGATTAGTGTTTTGCATC
rJMSF038O20+          GGATGCCGAGAAAGAGAAAGCTGAAGTCGAGACCCCTGATTGTGATTAGTGTTTTGCATC
                      ____________________________________________________________
consensus             GGATGCCGAGAAAGAGAAAGCTGAAGTCGAGACCCCTGATTGTGATTAGTGTTTTGCATC
 
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rJMFF017G11+          GTATTGATTTTAGGTTGGAGTGGTGATTAGTNTTTTGCATCGTATCGATTTTAGGTTGGG
rJMSF032N21+          GTATTGATTTTAGGTTGGAGTGGNGATTAGTCTTTTGCATCGTATCGATTTTAGGTTGGG
rJMSF004P16+          GNATTGATTTTAGGTTGGAGTGGTGATTAGTCTTNTGCATCGTATCGATTTTAGGTTGGG
JMFN033H15-           GTATTGATTTTAGGTTGGAGTGGTGATTAGTCTTTTGCATCGTATCGATTTTAGGTTGGG
rJMSF038O20+          GTATTGATTTTAGGTTGGAGTGGTGATTAGTCTTTTGCATCGTATCGATTTTAGGTTGGG
                      ____________________________________________________________
consensus             GTATTGATTTTAGGTTGGAGTGGTGATTAGTCTTTTGCATCGTATCGATTTTAGGTTGGG
 
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rJMFF017G11+          GTTTGGACTCGAANGTCGTGGTTAGGGTTCATGTGTTTGTGGCCATTTGTCATTTCTGTA
rJMSF032N21+          GTTTGGACTCGAANGTCGTGGTTAGGGTTCANGTGTTTGTGGCCNTTTGTCNTTTCTGTA
rJMSF004P16+          GTTTGGACTCGAANGTCGTGGTTAGGGTTCNNGTGTNTGTGGCCNTTTGNCATNTCCGTA
JMFN033H15-           GTTTGGACTCGAATGTCGTGGTTAGGGTTCATGTGTTTGTGGCCATTTGTCATTTCTGTA
rJMSF038O20+          GTTTGGACTCGAATGTCGTGGTTAGGGTTCATGTGTTTGTGGCCNTTTGTCATTTCTGTA
                      ____________________________________________________________
consensus             GTTTGGACTCGAATGTCGTGGTTAGGGTTCATGTGTTTGTGGCCATTTGTCATTTCTGTA
 
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rJMFF017G11+          GTTTTTTTTTTTCTTTCTGAAGTTTGTGTATTTGGGTTCAGTACTCTGACTCTTTTATCT
rJMSF032N21+          GTTTTTTTTTTTCTTTCTGAAGTTTGTGTATTTGGGTTTAGTACTCTGACTCTTTTATCT
rJMSF004P16+          GTTTNTTTTTTTCTTTCTGAAGTTTGTGTATTTGGGTTTAGTACTCTGACTCTTTTATCT
JMFN033H15-           GTTTTTTTTTTTCTTTCTGAAGTTTGTGTATTTGGGTTTAGTACTCTGACTCTTTTATCT
rJMSF038O20+          G-TTTTTTTTTTCTTTCTGAAGTTTGTGTATTTGGGTTTAGTACTCTGACTCTTTTATCT
                      ____________________________________________________________
consensus             GTTTTTTTTTTTCTTTCTGAAGTTTGTGTATTTGGGTTTAGTACTCTGACTCTTTTATCT
 
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rJMFF017G11+          CTGTGTTGGTGAGAGGTTGTATTTCAGTTGTGTCATA                       
rJMSF032N21+          CTGTGTTGGTGAGAGGT                                           
rJMSF004P16+          CTGTGTTGGNGAGAGGTTGTATTTCAGTTGTGTCATA                       
JMFN033H15-           CTGTGTTGGTGAGAGGTTGTATTTCAGTTGTGTCATA                       
rJMSF038O20+          CTGTGTTGGTGAGAGGTTGTATTTCAGTTGTGTCATAAGAGGCCATATTGAACTAATTCA
                      ____________________________________________________________
consensus             CTGTGTTGGTGAGAGGTTGTATTTCAGTTGTGTCATAAGAGGCCATATTGAACTAATTCA