Contig 001440:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF038H13-                                                                GAGGAGG
JMSF037H13-                                                                GAGGAGG
                      ____________________________________________________________
consensus                                                                  GAGGAGG
 
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JMSF038H13-           ACACTATCACCTATCCGCCACCGCCCTTCCCGGTGGCTCACGGCGGAAGTCATCGGGCTC
JMSF037H13-           ACACTATCACCTATCCGCCACCGCCCTTCCCGGTGGCTCACGGCGGAAGTCATCGGGCTC
                      ____________________________________________________________
consensus             ACACTATCACCTATCCGCCACCGCCCTTCCCGGTGGCTCACGGCGGAAGTCATCGGGCTC
 
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JMSF038H13-           TCCACTGNTCCAGCGTTAACTTCAGTGTCTCTCGTACTAGAGTTTTCAAGTCGGAAATGT
JMSF037H13-           TCCACTG-TCCAGCGTTAACTTCAGTGTCTCTCGTACTAGAGTTTTCAAGTCGGAAATGT
                      ____________________________________________________________
consensus             TCCACTGNTCCAGCGTTAACTTCAGTGTCTCTCGTACTAGAGTTTTCAAGTCGGAAATGT
 
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JMSF038H13-           CAGTTCCGTCGCCCCCCGAAGATCACATTGTCTTATGCGTTGGAGGTGCGACGGTGGACT
JMSF037H13-           CAGTTCCGTCGCCCCCCGAAGATCGCATTGTCTTAGGCGTTGGAGGTGCGACGGTGGACT
                      ____________________________________________________________
consensus             CAGTTCCGTCGCCCCCCGAAGATCGCATTGTCTTATGCGTTGGAGGTGCGACGGTGGACT
 
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JMSF038H13-           TCTTGGCGGTGGTGGCTTCTTACCCTAAGCCCGATGATAAAATTCNAAGCACCAGCTTTG
JMSF037H13-           TCTTGGCGGTGGTGGCTTCTTACCCTAAGCCCGATGATAAAATTCGAAGCACCAGCTTTG
                      ____________________________________________________________
consensus             TCTTGGCGGTGGTGGCTTCTTACCCTAAGCCCGATGATAAAATTCGAAGCACCAGCTTTG
 
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JMSF038H13-           AGGTTCAAGGAGGTGGCAACACTGGAAATGCTTTGACTTGTGCAGCTCGACTTGGCCTTA
JMSF037H13-           AGGTTCAAGGAGGTGGCAACACTGGAAATGCTTTGACTTGTGCAGCTCGACTTGGCCTTA
                      ____________________________________________________________
consensus             AGGTTCAAGGAGGTGGCAACACTGGAAATGCTTTGACTTGTGCAGCTCGACTTGGCCTTA
 
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JMSF038H13-           ATCCAAGGATTATTTCCAAGGTTGCTAATGATGGACAAGGCAAAGGAATATTGGATGAAC
JMSF037H13-           ATCCAAGGATTATTTCCAAGGTTGCTAATGATGGACAAGGCAAAGGAATATTGGATGAAC
                      ____________________________________________________________
consensus             ATCCAAGGATTATTTCCAAGGTTGCTAATGATGGACAAGGCAAAGGAATATTGGATGAAC
 
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JMSF038H13-           TANATGGGGATGGTGTTGACACNTCTTTCATGGNGGTATCCGAGGGAGGCAATTCACCTT
JMSF037H13-           TAGATGGGGATGGTGTTGACACGTCTTTCATGGTGGTATCCGAGGGAGGCAATTCACCTT
rJMSF038H13+                                                         GGCAATTCACCTT
                      ____________________________________________________________
consensus             TAGATGGGGATGGTGTTGACACGTCTTTCATGGTGGTATCCGAGGGAGGCAATTCACCTT
 
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JMSF038H13-           TCA                                                         
JMSF037H13-           TCAGCTATCATTGTTGACAGTCAAACGAAAACTCGCACTTGCATACATACTCCAGGAGAG
rJMSF038H13+          TCAGCTATCATTGTTGACAGTCAAACGAAAACTCGCACTTGCATACATACTCCAGGAGAG
                      ____________________________________________________________
consensus             TCAGCTATCATTGTTGACAGTCAAACGAAAACTCGCACTTGCATACATACTCCAGGAGAG
 
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JMSF037H13-           CCACCCATGAAACCAGAAGAGCTATCCCAATCACATTTGCTATCTGCTATTGATGGAGCA
rJMSF038H13+          CCACCCATGAAACCAGAAGAGCTATCCCAATCACATTTGCTATCTGCTATTGATGGAGCA
                      ____________________________________________________________
consensus             CCACCCATGAAACCAGAAGAGCTATCCCAATCACATTTGCTATCTGCTATTGATGGAGCA
 
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JMSF037H13-           AGAATTGTCTATTTTGATGGAAGATTGTATGAAACTGCTTGCGTTGTGGCAAAGGAGGCA
rJMSF037H13+                                              GCTTGCGTTGTGGCAAAGGAGGCA
rJMSF038H13+          AGAATTGTCTATTTTGATGGAAGATTGTATGAAACTGCTTGCGTTGTGGCAAAGGAGGCA
                      ____________________________________________________________
consensus             AGAATTGTCTATTTTGATGGAAGATTGTATGAAACTGCTTGCGTTGTGGCAAAGGAGGCA
 
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JMSF037H13-           AGTAGTAGGAGCATACCCATTTTAGTTGATGCGGAAAGGGCAAGGGACGGACTGGATGAT
rJMSF037H13+          AGTAGTAGGAGCATACCCATTTTAGTTGATGCGGAAAGGGCAAGGGACGGACTGGATGAT
rJMSF038H13+          AGTAGTAGGAGCATACCCATTTTAGTTGATGCGGAAAGGGCAAGGGACGGACTGGATGAT
                      ____________________________________________________________
consensus             AGTAGTAGGAGCATACCCATTTTAGTTGATGCGGAAAGGGCAAGGGACGGACTGGATGAT
 
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JMSF037H13-           CTTTTGANCTTTGCTA                                            
rJMSF037H13+          CTTTTGAACTTTGCTAGTTATGTTGTATGCTCAACAAAGTTTCCACAGGCATGGACCGAC
rJMSF038H13+          CTTTTGAACTTTGCTAGTTATGTTGTATGCTCAACAAAGTTTCCACAGGCATGGACCGAC
                      ____________________________________________________________
consensus             CTTTTGAACTTTGCTAGTTATGTTGTATGCTCAACAAAGTTTCCACAGGCATGGACCGAC
 
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rJMSF037H13+          ACCCCTACTCTTCCAAGTGCACTTATTTCCATGCTTATACGATTACCAAATGTAAAATTT
rJMSF038H13+          ACCCCTACTCTTCCAAGTGCACTTATTTCCATGCTTATACGATTACCAAATGTAAAATTT
                      ____________________________________________________________
consensus             ACCCCTACTCTTCCAAGTGCACTTATTTCCATGCTTATACGATTACCAAATGTAAAATTT
 
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rJMSF037H13+          GTGGTTGTGACATTGGGTGAAGAGGGTTGCATAATGCTAGAAAGGACTGAAACTGAGTCC
rJMSF038H13+          GTGGTTGTGACATTGGGTGAAGAGGGTTGCATAATGCTAGAAAGGACTGAAACTGAGTCC
                      ____________________________________________________________
consensus             GTGGTTGTGACATTGGGTGAAGAGGGTTGCATAATGCTAGAAAGGACTGAAACTGAGTCC
 
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rJMSF037H13+          ACTCAATATGAAGAAATAGATATAGACGATTTGTATGAAATACTGAAGCAAAGGAAGGAT
rJMSF038H13+          ACTCAATATGAAGAAATAGATATAGACGATTTGTATGAAATACTGAAGCAAAGGAAGGAT
                      ____________________________________________________________
consensus             ACTCAATATGAAGAAATAGATATAGACGATTTGTATGAAATACTGAAGCAAAGGAAGGAT
 
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rJMSF037H13+          GCTAACACAACCATCCCTACATGCATACCATCGAATGTGGCAAAACTGCGAGCAAAGGGA
rJMSF038H13+          GCTAACACAACCATCCCTACATGCATACCATCGAATGTGGCAAAACTGCGAGCAAAGGGA
                      ____________________________________________________________
consensus             GCTAACACAACCATCCCTACATGCATACCATCGAATGTGGCAAAACTGCGAGCAAAGGGA
 
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rJMSF037H13+          GTAGGGATGGTTTGTGGTAGGCTACTTCTGGGAACAACTGAAAAGATACCGCCTTCTGAA
rJMSF038H13+          GTAGGGATGGTTTGTGGTAGGCTACTTCTGGGAACAACTGAAAAGATACCGCCTTCTGAA
                      ____________________________________________________________
consensus             GTAGGGATGGTTTGTGGTAGGCTACTTCTGGGAACAACTGAAAAGATACCGCCTTCTGAA
 
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rJMSF037H13+          TTAGTTGATACAACCGGTGCTGGAGATGCATTTATCGGTGCAATCCTTTACTCAATCTGT
rJMSF038H13+          TTAGTTGATACAACCGGTGCTGGAGATGCATTTATCGGTGCAATCCTTTACTCAATCTGT
                      ____________________________________________________________
consensus             TTAGTTGATACAACCGGTGCTGGAGATGCATTTATCGGTGCAATCCTTTACTCAATCTGT
 
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rJMSF037H13+          GCTGATATGCCCCCAGAAAAGATGCTGCCATTTGCTGCCCAAGTGGCAGCTATCGGTTGC
rJMSF038H13+          GCTGATATGCCCCCAGAAAAGATGCTGCCATTTGCTGCCCAAGTGGCAGCTATCGGTTGC
                      ____________________________________________________________
consensus             GCTGATATGCCCCCAGAAAAGATGCTGCCATTTGCTGCCCAAGTGGCAGCTATCGGTTGC
 
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rJMSF037H13+          AGAGCCTTGGGTGCCCGAGCTGGTCTTCCCCGACGTGATGACCCTCGCTTGACACCTTTT
rJMSF038H13+          AGAGCCTTGGGTGCCCGAGCTGGTCTTCCCCGACGTGATGACCCTCGCTTGACACCTTTT
                      ____________________________________________________________
consensus             AGAGCCTTGGGTGCCCGAGCTGGTCTTCCCCGACGTGATGACCCTCGCTTGACACCTTTT
 
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rJMSF037H13+          TTAGTGTAGGAGGGCGCCCGAGGGGTGCCCACAATATTGGTCTAGCAAGTCACAGAAACA
rJMSF038H13+          TTAGTGTAGGAGGGCGCCCGAGGGGTGCCCACAATATTGGTCTAGCAAGTCACAGAAACA
                      ____________________________________________________________
consensus             TTAGTGTAGGAGGGCGCCCGAGGGGTGCCCACAATATTGGTCTAGCAAGTCACAGAAACA
 
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rJMSF037H13+          AAAGGATTGTGCTTTTTCTTGTCATGTTCTTGTCCGGGTTTCTCTGGACTGACATTCTGT
rJMSF038H13+          AAAGGATTGTGCTTTTTCTTGTCATGTTCTTGTCCGGGTTTCTCTGGACTGACATTCTGT
                      ____________________________________________________________
consensus             AAAGGATTGTGCTTTTTCTTGTCATGTTCTTGTCCGGGTTTCTCTGGACTGACATTCTGT