Contig 001427:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF022C05Sequence606000467 (10)ref|XP_006341679.1|98.6PREDICTED: uncharacterized protein LOC102589286 [Solanum tuberosum]766001427 (6)ref|XP_009786426.1|1e-99PREDICTED: uncharacterized protein LOC104234548 isoform X1 [Nicotiana sylvestri
JMSF023H22Sequence580000467 (10)ref|XP_006341679.1|92.8PREDICTED: uncharacterized protein LOC102589286 [Solanum tuberosum]803001427 (6)ref|XP_009786426.1|2e-105PREDICTED: uncharacterized protein LOC104234548 isoform X1 [Nicotiana sylvestri
JMSF036C22Sequence633000467 (10)ref|XP_006341679.1|93.6PREDICTED: uncharacterized protein LOC102589286 [Solanum tuberosum]682001427 (6)ref|XP_009786426.1|4e-52PREDICTED: uncharacterized protein LOC104234548 isoform X1 [Nicotiana sylvestri
JMSF038G05Sequence628000467 (10)ref|XP_006341679.1|93.6PREDICTED: uncharacterized protein LOC102589286 [Solanum tuberosum]944001427 (6)ref|XP_009786426.1|7e-129PREDICTED: uncharacterized protein LOC104234548 isoform X1 [Nicotiana sylvestri
JMSF043J02Sequence756000467 (10)ref|XP_006341679.1|94.0PREDICTED: uncharacterized protein LOC102589286 [Solanum tuberosum]810001427 (6)ref|XP_009786426.1|4e-112PREDICTED: uncharacterized protein LOC104234548 isoform X1 [Nicotiana sylvestri
JMSF052I12Sequence612000467 (10)ref|XP_006341679.1|98.6PREDICTED: uncharacterized protein LOC102589286 [Solanum tuberosum]936001427 (6)ref|XP_009786426.1|1e-132PREDICTED: uncharacterized protein LOC104234548 isoform X1 [Nicotiana sylvestri

Alignment

This contig is upended


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rJMSF052I12+             CCAAAATTAAAATCACTTGTTGAGTCGATGGCTAGAATGTGGGAGACCATGAAGGGA
rJMSF038G05+                                    GTCGATGGCTAGAATGTGGGAGACCATGAAGGGA
                      ____________________________________________________________
consensus                CCAAAATTAAAATCACTTGTTGAGTCGATGGCTAGAATGTGGGAGACCATGAAGGGA
 
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rJMSF052I12+          CATCATGAGAATCAATGTCAGATCGTGCTAGCTCTGAGGTCTCTGGATATGTCGCAGTCC
rJMSF038G05+          CATCATGAGAATCAATGTCAGATCGTGCTAGCTCTGAGGTCTCTGGATATGTCGCAGTCC
                      ____________________________________________________________
consensus             CATCATGAGAATCAATGTCAGATCGTGCTAGCTCTGAGGTCTCTGGATATGTCGCAGTCC
 
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rJMSF052I12+          CCCAAAGAAACAAGTGAGCACCACTATGAACGCACTTACCAGTTAGGTGTTGTTGTACAA
rJMSF043J02+          CCCAAAGAAACAAGTGAGCACCACTATGAACGCACTTACCAGTTAGGTGTTGTTGTACAA
rJMSF023H22+                                  TATGAACGCACTTACCAGTTAGGTGTTGTTGTACAA
rJMSF038G05+          CCCAAAGAAACAAGTGAGCACCACTATGAACGCACTTACCAGTTAGGTGTTGTTGTACAA
                      ____________________________________________________________
consensus             CCCAAAGAAACAAGTGAGCACCACTATGAACGCACTTACCAGTTAGGTGTTGTTGTACAA
 
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rJMSF052I12+          GAGTGGCATTCACAGTTTGAGAAAATGATAATCCACCAGAAGGAATATATTAGAGGCCTG
rJMSF043J02+          GAGTGGCATTCACAGTTTGAGAAAATGATAATCCACCAGAAGGAATATATTAGAGGCCTG
rJMSF023H22+          GAGTGGCATTCACAGNTTGAGAAAATGATAATCCACCAGAAGGAATATATTAGAGGCCTG
rJMSF022C05+          GAGTGGCATTCACAGTTTGAGAAAATGATAATCCACCAGAAGGAATATATTAGAGGCCTG
rJMSF038G05+          GAGTGGCATTCACAGTTTGAGAAAATGATAATCCACCAGAAGGAATATATTAGAGGCCTG
                      ____________________________________________________________
consensus             GAGTGGCATTCACAGTTTGAGAAAATGATAATCCACCAGAAGGAATATATTAGAGGCCTG
 
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rJMSF052I12+          AACGATTGGTTGAAGCTAAATCTGGTTCCTATTGATACAAATCTGAAGGAAAAGGTTTCA
rJMSF043J02+          AACGATTGGTTGAAGCTAAATCTGGTTCCTATTGATACAAATCTGAAGGAAAAGGTTTCA
rJMSF023H22+          AACGATTGGTTGAAGCTAAATCTGGTTCCTATTGATACAAATCTGAAGGAAAAGGTTTCA
rJMSF022C05+          AACGATTGGTTGAAGCTAAATCTGGTTCCTATTGATACAAATCTGAAGGAAAAGGTTTCA
rJMSF038G05+          AACGATTGGTTGAAGCTAAATCTGGTTCCTATTGATACAAATCTGAAGGAAAAGGTTTCA
                      ____________________________________________________________
consensus             AACGATTGGTTGAAGCTAAATCTGGTTCCTATTGATACAAATCTGAAGGAAAAGGTTTCA
 
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rJMSF052I12+          TCCCCACAAAGGCCCCAGAACCCTCCAATTCTTGCACTTCTGCATGCCTGGCAAGATCTG
rJMSF043J02+          TCCCCACAAAGGCCCCAGAACCCTCCAATTCTTGCACTTCTGCATGCCTGGCAAGATCTG
rJMSF023H22+          TCCCCACAAAGGCCCCAGAACCCTCCAATTCTTGCACTTCTGCATGCCTGGCAAGATCTG
rJMSF022C05+          TCCCCACAAAGGCCCCAGAACCCTCCAATTCTTGCACTTCTGCATGCCTGGCAAGATCTG
rJMSF038G05+          TCCCCACAAAGGCCCCAGAACCCTCCAATTCTTGCACTTCTGCATGCCTGGCAAGATCTG
rJMSF036C22+                                                  TGCATGCCTGGCAAGATCTG
                      ____________________________________________________________
consensus             TCCCCACAAAGGCCCCAGAACCCTCCAATTCTTGCACTTCTGCATGCCTGGCAAGATCTG
 
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rJMSF052I12+          ATTGGGAAGCTTCCTGATGAGCTTGCTAAAACCGCTATTTATAGC-TTTTCTGCTGTTGT
rJMSF043J02+          ATTGGGAAGCTTCCTGATGAGCTTGCTAAAACCGCTATTTATAGC-TTTTCTGCTGTTGT
rJMSF023H22+          ATTGGGAAGCTTCCTGATGAGCTTGCTAAAACCGCTATTTATAGC-TTTTCTGCTGTTGT
rJMSF022C05+          ATTGGGAAGCTTCCTGATGAGCTTGCTAAAACCGCTATTTATAGC-TTTTCTGCTGTTGT
rJMSF038G05+          ATTGGGAAGCTTCCTGATGAGCTTGCTAAAACCGCTATTTATAGC-TTTTCTGCTGTTGT
rJMSF036C22+          ATTGGGAAGCTTCCTGATGAGCTTGCTAAAACCGCTATTTATAGCTTTTTCTGCTGTTGT
                      ____________________________________________________________
consensus             ATTGGGAAGCTTCCTGATGAGCTTGCTAAAACCGCTATTTATAGC-TTTTCTGCTGTTGT
 
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rJMSF052I12+          AAATACCATCGTGCAACATCAACTAGATGAGATGAAATTGAAGGACAGGTGTAAGGATAC
rJMSF043J02+          AAATACCATCGTGCAACATCAACTAGATGAGATGAAATTGAAGGACAGGTGTAAGGATAC
rJMSF023H22+          AAATACCATCGTGCAACATCAACTAGATGAGATGAAATTGAAGGACAGGTGTAAGGATAC
rJMSF022C05+          AAATACCATCGTGCAACATCAACTAGATGAGATGAAATTGAAGGACAGGTGTAAGGATAC
rJMSF038G05+          AAATACCATCGTGCAACATCAACTAGATGAGATGAAATTGAAGGACAGGTGTAAGGATAC
rJMSF036C22+          AAATACCATCGTGCAACATCAACTAGATGAGATGAAATTGAAGGACAGGTGTAAGGATAC
                      ____________________________________________________________
consensus             AAATACCATCGTGCAACATCAACTAGATGAGATGAAATTGAAGGACAGGTGTAAGGATAC
 
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rJMSF052I12+          AAGAAAGGAGCTTGAAAAGAGGACCAGGCAATTTGAGGACTGGTATCATAAGTATATGCA
rJMSF043J02+          AAGAAAGGAGCTTGAAAAGAGGACCAGGAAATTTGAGGACTGGTATCATAAGTATATGCA
rJMSF023H22+          AAGAAAGGAGCTTGAAAAGAGGACCAGGCAATTTGAGGACTGGTATCATAAGTATATGCA
rJMSF022C05+          AAGAAAGGAGCTTGAAAAGAGGACCAGGCAATTTGAGGACTGGTATCATAAGTATATGCA
rJMSF038G05+          AAGAAAGGAGCTTGAAAAGAGGACCAGGCAATTTGAGGACTGGTATCATAAGTATATGCA
rJMSF036C22+          AAGAAAGGAGCTTGAAAAGAGGACCAGGCAATTTGAGGACTGGTATCATAAGTATATGCA
                      ____________________________________________________________
consensus             AAGAAAGGAGCTTGAAAAGAGGACCAGGCAATTTGAGGACTGGTATCATAAGTATATGCA
 
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rJMSF052I12+          ACGGAGAACTCCAAACGATGACACAGAACAAGATGGACCTCACGAGGATAACAATGTAAT
rJMSF043J02+          ACGGAGAACTCCAAACGATGACACAGAACAAGATGGACCTCACGAGGATAACAATGTAAT
rJMSF023H22+          ACGGAGAACTCCAAACGATGACACAGAACAAGATGGACCTCACGAGGATAACAATGTAAT
rJMSF022C05+          ACGGAGAACTCCAAACGATGACACAGAACAAGATGGACCTCACGAGGATAACAATGTAAT
rJMSF038G05+          ACGGAGAACTCCAAACGATGACACAGAACAAGATGGACCTCACGAGGATAACAATGTAAT
rJMSF036C22+          ACGGAGAACTCCAAACGATGACACAGAACAAGATGGACCTCACGAGGATAACAATGTAAT
                      ____________________________________________________________
consensus             ACGGAGAACTCCAAACGATGACACAGAACAAGATGGACCTCACGAGGATAACAATGTAAT
 
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rJMSF052I12+          CGAGCGACAACTACAACTAGAAGCACTGAAGCAGAGGTTGAAAGAGGAGGAGGAGGCCTA
rJMSF043J02+          CGAGCGACAACTACAACTAGAAGCACTGAAGCAGAGGTTGAAAGAGGAGGAGGAGGCCTA
rJMSF023H22+          CGAGCGACAACTACAACTAGAAGCACTGAAGCAGAGGTTGAAAGAGGAGGAGGAGGCCTA
rJMSF022C05+          CGAGCGACAACTACAACTAGAAGCACTGAAGCAGAGGTTGAAAGAGGAGGAGGAGGCCTA
rJMSF038G05+          CGAGCGACAACTACAACTAGAAGCACTGAAGCAGAGGTTGAAAGAGGAGGAGGAGGCCTA
rJMSF036C22+          CGAGCGACAACTACAACTAGAAGCACTGAAGCAGAGGTTGAAAGAGGAGGAGGAGGCCTA
                      ____________________________________________________________
consensus             CGAGCGACAACTACAACTAGAAGCACTGAAGCAGAGGTTGAAAGAGGAGGAGGAGGCCTA
 
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rJMSF052I12+          CATGAGGCAGTGTATGCAGGTCAGAGTGAAGTCACTGACTAGTTTAAGAACAGGCCTTCC
rJMSF043J02+          CATGAGGCAGTGTATGCAGGTCAGAGTGAAGTCACTGACTAGTTTAAGAACAGGCCTTCC
rJMSF023H22+          CATGAGGCAGTGTATGCAGGTCAGAGTGAAGTCACTGACTAGTTTAAGAACAGGCCTTCC
rJMSF022C05+          CATGATGCAGTGTATGCAGGTCAGAGTGAAGTCACTGACTAGTTTAAGAACAGGCCTTCC
rJMSF038G05+          CATGAGGCAGTGTATGCAGGTCAGAGTGAAGTCACTGACTAGTTTAAGAACAGGCCTTCC
rJMSF036C22+          CATGAGGCAGTGTATGCAGGTCAGAGTGAAGTCACTGACTAGTTTAAGAACAGGCCTTCC
                      ____________________________________________________________
consensus             CATGAGGCAGTGTATGCAGGTCAGAGTGAAGTCACTGACTAGTTTAAGAACAGGCCTTCC
 
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rJMSF052I12+          CGAACTTTTTCATGCAATGTCAGAATTTTCTCGTGCTTGTTCGATTATGTACCAGACTTT
rJMSF043J02+          CGAACTTTTTCATGCAATGTCAGAATTTTCTCGTGCTTGTTCGATTATGTACCAGACTTT
rJMSF023H22+          CGAACTTTTTCATGCAATGTCAGAATTTTCTCGTGCTTGTTCGATTATGTACCAGACTTT
rJMSF022C05+          CGAACTTTTTCATGCAATGTCAGAATTTTCTCGTGCTTGTTCGATTATGTACCAGACTTT
rJMSF038G05+          CGAACTTTTTCATGCAATGTCAGAATTTTCTCGTGCTTGTTCGATTATGTACCAGACTTT
rJMSF036C22+          CGAACTTTTTCATGCAATGTCAGAATTTTCTCGTGCTTGTTCGATTATGTACCAGACTTT
                      ____________________________________________________________
consensus             CGAACTTTTTCATGCAATGTCAGAATTTTCTCGTGCTTGTTCGATTATGTACCAGACTTT
 
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rJMSF052I12+          GGAGTCCATCACACATCCGCTTAACAGAGAGAGCACATAACCGGGTAATGTTTGGCCTCA
rJMSF043J02+          GGAGTCCATCACACATCCGCTTAACAGAGAGAGCACATAACCGGGTAATGTTTGGCCTCA
rJMSF023H22+          GGAGTCCATCACACATCCGCTTAACAGAGAGAGCACATAACCGGGTAATGTTTGGCCTCA
rJMSF022C05+          GGAGTCCATCACACATCCGCTTAACAGAGAGAGCACATAACCGGGTAATGTTTGGCCTCA
rJMSF038G05+          GGAGTCCATCACACATCCGCTTAACAGAGAGAGCACATAACCGGGTAATGTTTGGCCTCA
rJMSF036C22+          GGAGTCCATCACACATCCGCTTAACAGAGAGAGCACATAACCGGGTAATGTTTGGCCTCA
                      ____________________________________________________________
consensus             GGAGTCCATCACACATCCGCTTAACAGAGAGAGCACATAACCGGGTAATGTTTGGCCTCA
 
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rJMSF052I12+          CAAGATTTTGCGTTGTTCATAATTTACTCAGAATACATTACATTACATTGTATTGTGTTC
rJMSF043J02+          CAAGATTTTGCGTTGTTCATAATTTACTCAGAATACATTACATTACATTGTATTGTGTTC
rJMSF023H22+          CAAGATTTTGCGTTGTTCATAATTTACTCAGAATACATTACATTACATTGTATTGTGTTC
rJMSF022C05+          CAAGATTTTGCGTTGTTCATAATTTACTCAGAATACATTACATTACATTGTATTGTGTTC
rJMSF038G05+          CAAGATTTTGCGTTGTTCATAATTTACTCAGAATACATTACATTACATTGTATTGTGTTC
rJMSF036C22+          CAAGATTTTGCGTTGTTCATAATTTACTCAGAATACATTACATTACATTGTATTGTGTTC
                      ____________________________________________________________
consensus             CAAGATTTTGCGTTGTTCATAATTTACTCAGAATACATTACATTACATTGTATTGTGTTC
 
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rJMSF052I12+          TGTCATTTTGTGTGCTGAGAAACCCAAAAA                              
rJMSF043J02+          TGTCATTTTGTGTGCTGAGAAACCCAAAAAC                             
rJMSF023H22+          TGTCATTTTGTGTGCTGAGAAACCCAAAAAC                             
rJMSF022C05+          TGTCATTTTGTGTGCTGAGAAACCCAAAAAC                             
rJMSF038G05+          TGTCATTTTGTGTGCTGAGAAACCCAAAAACAATGTGATGTGATATTTTACTATGTAATT
rJMSF036C22+          TGTCATTTTGTGTGCTGAGAAACCCAAAAACAATGTGATGTGATATTTTACTATGTAATT
                      ____________________________________________________________
consensus             TGTCATTTTGTGTGCTGAGAAACCCAAAAACAATGTGATGTGATATTTTACTATGTAATT
 
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rJMSF038G05+          TTC                                                         
rJMSF036C22+          TTCAATAGTCAACATGGTACTGAGTTCCTTGAATGAACTTTTCATTTCTCAAGTGCTCTG
                      ____________________________________________________________
consensus             TTCAATAGTCAACATGGTACTGAGTTCCTTGAATGAACTTTTCATTTCTCAAGTGCTCTG