Contig 001424:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF029C10+                                     CTCAGATGGTGAAATTCACTCGGCATTCATGGA
                      ____________________________________________________________
consensus                                        CTCAGATGGTGAAATTCACTCGGCATTCATGGA
 
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rJMSF029C10+          GATGAAATATTGTATGTTGGTGATCATATATATACAGATGTTAGCCAATCCAAAGTCAAT
rJMSF035A04+                                     ATATATNCAGATGNTAGCCAATCCAAAGTCCAT
                      ____________________________________________________________
consensus             GATGAAATATTGTATGTTGGTGATCATATATATACAGATGTTAGCCAATCCAAAGTCCAT
 
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rJMSF029C10+          CTGCGATGGAGGACAGCATTGATTTGCAGAGAACTTGAAGAAGAGTATAATGCATTGATT
rJMSF035A04+          CTGCGATGGAGGACAGCA-TGATTNGCAGAGAACTTGAAGAAGAGTATAATGCATTGATT
                      ____________________________________________________________
consensus             CTGCGATGGAGGACAGCATTGATTTGCAGAGAACTTGAAGAAGAGTATAATGCATTGATT
 
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rJMSF029C10+          CGTAGTCAAGGTCATCGAGCATTGCTGATGGAGCTAATTAGTCAGAAGGAGGTTGTAGGA
rJMSF035A04+          CGTAGTCAAGGTCATCGAGCATTGCTGANGGAGCTAATTAGTCAGAAGGAGGTTGTAGGA
                      ____________________________________________________________
consensus             CGTAGTCAAGGTCATCGAGCATTGCTGATGGAGCTAATTAGTCAGAAGGAGGTTGTAGGA
 
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rJMSF029C10+          GGTCTCTTTAACCAACTTCGGCTTGCTCTGCAGAGGAGAACAATGGAGCGACCTGCACAA
rJMSF035A04+          GGTCTCTTTAACCAACTTCGGCTTGCTCTGCAGAGGAGAACAATGGAGCGACCTGCACAA
                      ____________________________________________________________
consensus             GGTCTCTTTAACCAACTTCGGCTTGCTCTGCAGAGGAGAACAATGGAGCGACCTGCACAA
 
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rJMSF029C10+          ACTCTTGCTGCTACCAATATGGATGATAAAGAACTCACTGAAAGCATTCAGAAGCTACTT
rJMSF035A04+          ACTCTTGCTGCTACCA--ATGGATGATAAAGAACTCACTGAAAGCATTCAGAAGCTACTT
                      ____________________________________________________________
consensus             ACTCTTGCTGCTACCAATATGGATGATAAAGAACTCACTGAAAGCATTCAGAAGCTACTT
 
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rJMSF029C10+          ATTGTTATGCAAAGACTGGATGAGAAGATTGCTCTGATGTTAGAAGCAGATGGAGAGCAT
rJMSF035A04+          ATTGTTATGCAAAGACTGGATGAGAAGATTGCTCTGATGTTAGAAGCAGATGGAGAGCAT
                      ____________________________________________________________
consensus             ATTGTTATGCAAAGACTGGATGAGAAGATTGCTCTGATGTTAGAAGCAGATGGAGAGCAT
 
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rJMSF029C10+          TTTAACAGAAGGTGGGGTTTCATTTCACGGGCAGGCCTTTGGGACAAAAGCCACTTAATG
rJMSF035A04+          TTTAACAGAAGGTGGGGTTTCATTTCACGGGCAGGCCTTTGGGACAAAAGCCACTTAATG
                      ____________________________________________________________
consensus             TTTAACAGAAGGTGGGGTTTCATTTCACGGGCAGGCCTTTGGGACAAAAGCCACTTAATG
 
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rJMSF029C10+          CGGCAAATTGAGAAGTATGCTGATATTTATACATCAAGGGTTTCAAATTTTCTCCAATAT
rJMSF035A04+          CGGCAAATTGAGAAGTATGCTGATATTTATACATCAAGGGTTTCAAATTTTCTCCAATAT
                      ____________________________________________________________
consensus             CGGCAAATTGAGAAGTATGCTGATATTTATACATCAAGGGTTTCAAATTTTCTCCAATAT
 
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rJMSF029C10+          ACACCTTTCATGTATTTCCATGCTCAAGAACAGTCTCTTGCTCATGATTCATATTCGTTC
rJMSF035A04+          ACACCTTTCATGTATTTCCATGCTCAAGAACAGTCTCTTGCTCATGATTCATATTCGTTC
                      ____________________________________________________________
consensus             ACACCTTTCATGTATTTCCATGCTCAAGAACAGTCTCTTGCTCATGATTCATATTCGTTC
 
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rJMSF029C10+          CACGGTCTAAGAGTTGATAAATCAGATGAGGGCAATGGCAACGGCAACAGATATTCTCTC
rJMSF035A04+          CACGGTCTAAGAGTTGATAAATCAGATGAGGGCAATGGCAACGGCAACAGATATTCTCTC
                      ____________________________________________________________
consensus             CACGGTCTAAGAGTTGATAAATCAGATGAGGGCAATGGCAACGGCAACAGATATTCTCTC
 
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rJMSF029C10+          TAATAACATCATGTGCCGGTAGGTGCAATCTGAAGTTGATAACTGTAGCATATAATCGAT
rJMSF035A04+          TAATAACATCATGTGCCGGTAGGTGCAATCTGAAGTTGATAACTGTAGCATATAATCGAT
                      ____________________________________________________________
consensus             TAATAACATCATGTGCCGGTAGGTGCAATCTGAAGTTGATAACTGTAGCATATAATCGAT
 
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rJMSF029C10+          AATTCACTGTGTTGTACAATGTGAAACTAGTGCTAGTACAACGGGGATAACTGTATTTGA
rJMSF035A04+          AATTCACTGTGTTGTACAATGTGAAACTAGTGCTAGTACAACGGGGATAACTGTATTTGA
                      ____________________________________________________________
consensus             AATTCACTGTGTTGTACAATGTGAAACTAGTGCTAGTACAACGGGGATAACTGTATTTGA
 
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rJMSF029C10+          ATTGTGTACCAAGGTAAAGAAATTCAGTATAGATTTGCCT                    
rJMSF035A04+          ATTGTGTACCAAGGTAAAGAAATTCAGTATAGATTTGCCTTAATTTCTTCTTTTATCGTG
                      ____________________________________________________________
consensus             ATTGTGTACCAAGGTAAAGAAATTCAGTATAGATTTGCCTTAATTTCTTCTTTTATCGTG