Contig 001422:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF007G03Sequence283009203 (3)700001422 (3)ref|XP_011076637.1|285PREDICTED: uncharacterized protein LOC105160836 [Sesamum indicum]
JMSF016B20Sequence260009203 (3)805001422 (3)ref|XP_009759205.1|348PREDICTED: uncharacterized protein LOC104211781, partial [Nicotiana sylvestris]
JMSF034F14Sequence547010335 (50)ref|XP_006343129.1|2e-19PREDICTED: putative lipid-transfer protein DIR1-like [Solanum tuberosum]645001422 (3)ref|XP_011076637.1|249PREDICTED: uncharacterized protein LOC105160836 [Sesamum indicum]

Alignment

This contig is upended


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rJMSF016B20+                                                    ACAGTATGAAAGCGTAAA
                      ____________________________________________________________
consensus                                                       ACAGTATGAAAGCGTAAA
 
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rJMSF016B20+          GAAAANTTTTGGAAGAGANTGACTATGTTATAACAGATACTGTCAGAGGAACTGTCGTAG
                      ____________________________________________________________
consensus             GAAAANTTTTGGAAGAGANTGACTATGTTATAACAGATACTGTCAGAGGAACTGTCGTAG
 
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rJMSF016B20+          ACTTTTTTACGGTGTGGCTTCCCGCCCCCACGATTTCTTTCCTACCTGCAGCCAGCGATG
                      ____________________________________________________________
consensus             ACTTTTTTACGGTGTGGCTTCCCGCCCCCACGATTTCTTTCCTACCTGCAGCCAGCGATG
 
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rJMSF016B20+          CTAACATGCCCGAAAGCATCGAAGCGTTAAAGGGTCTCCTCGGTTCCATCCCGGATAATG
rJMSF007G03+                          CATCGAAGCGTTAAAGGGTCTCCTCGGTTNCATCCCGGATAATG
                      ____________________________________________________________
consensus             CTAACATGCCCGAAAGCATCGAAGCGTTAAAGGGTCTCCTCGGTTCCATCCCGGATAATG
 
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rJMSF016B20+          CGTTTCAAAAAAGCATTGCAGGGAAGGACTGGGGATTGAGCCACCGAGTTGCGTCAGTCA
rJMSF007G03+          CGTTTCAAAAAAGCATTGCAGGGAAGGACTGGGGATTGAGCCACCGAGTTGCGTCAGTCA
rJMSF034F14+                                   GGACTGGGGATTGAGCCACCGAGTTGCGTCAGTCA
                      ____________________________________________________________
consensus             CGTTTCAAAAAAGCATTGCAGGGAAGGACTGGGGATTGAGCCACCGAGTTGCGTCAGTCA
 
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rJMSF016B20+          TTGTTGGCGGTCTTAAACTCGCCAGCGTTGGATTCATTTCGAGTATCGGAGCAGTGACTT
rJMSF007G03+          TTGTNGGCGGTCTTAAACTCGCCAGCGTTGGATTCATTTCGAGTATCGGAGCAGTGACTT
rJMSF034F14+          TNGTTGGCGGTCTTAAACTCGCCAGCGTTGGATTCATTTCGAGTATCGGAGCAGTGACTT
                      ____________________________________________________________
consensus             TTGTTGGCGGTCTTAAACTCGCCAGCGTTGGATTCATTTCGAGTATCGGAGCAGTGACTT
 
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rJMSF016B20+          CTTCCAATATCTTGTTTGGAATGCGTAAGATAATAAACCCGACTCTTGCTAATAAGACGC
rJMSF007G03+          CTTCCAATATCTTGTTTGGAATGCGTAAGATAATAAACCCGACTCTTGNTAATAAGACGC
rJMSF034F14+          CTTCCAATATCTTGTTTGGAATGCGTAAGATAATAAACCCGACTCTTGCTAATAAGACGC
                      ____________________________________________________________
consensus             CTTCCAATATCTTGTTTGGAATGCGTAAGATAATAAACCCGACTCTTGCTAATAAGACGC
 
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rJMSF016B20+          AACAAAACAAAAGATCTCCCGTTCTGAAAACAGCGCTCGTGTATGGAGGCTTTCTTGGAA
rJMSF007G03+          AACAAAACAAAAGATCTCCCGTTCTGAAAACAGCGCTCGTGTATGGAGGCTTTCTTGGAA
rJMSF034F14+          AACAAAACAAAAGATCTCCCGTTCTGAAAACAGCGCTCGTGTATGGAGGCTTTCTTGGAA
                      ____________________________________________________________
consensus             AACAAAACAAAAGATCTCCCGTTCTGAAAACAGCGCTCGTGTATGGAGGCTTTCTTGGAA
 
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rJMSF016B20+          CATCAGCAAATCTTCGGTATCAGATTATTGCAGGAATTATAGAGCACCGGATTTCTGACC
rJMSF007G03+          CATCAGCAAATCTTCGGTATCAGATTATTGCAGGAATTATAGAGCACCGGATTTCTGACC
rJMSF034F14+          CATCAGCAAATCTTCGGTATCAGATTATTGCAGGAATTATAGAGCACCGGATTTCTGACC
                      ____________________________________________________________
consensus             CATCAGCAAATCTTCGGTATCAGATTATTGCAGGAATTATAGAGCACCGGATTTCTGACC
 
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rJMSF016B20+          AATTCTCCGACCAGACATTACTCGTAAATATGCTGTCTTTTGTTGCTCGTACGATCAACT
rJMSF007G03+          AATTCTCCGACCAGACATTACTNGTAAATATGCTGTCTTTTGTTGCTCGTACGATCAACT
rJMSF034F14+          AATTCTCCGACCAGACATTACTCGTAAATATGCTGTCTTTTGTTGCTCGTACGATCAACT
                      ____________________________________________________________
consensus             AATTCTCCGACCAGACATTACTCGTAAATATGCTGTCTTTTGTTGCTCGTACGATCAACT
 
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rJMSF016B20+          CATACTGGGGCACCCAGCAATGGATAGATCTTGCGCGGTTTACAGG              
rJMSF007G03+          CATACTGGGGCACCCAGCAATGGATAGATCTTGCGCGGTTTACAGGGNTGCAACCACGCC
rJMSF034F14+          CATACTGGGGCACCCAGCAATGGATAGATCTTGCGCGGTTTACAGGGCTGCAACCACGCC
                      ____________________________________________________________
consensus             CATACTGGGGCACCCAGCAATGGATAGATCTTGCGCGGTTTACAGGGCTGCAACCACGCC
 
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rJMSF007G03+          AACCACCACGAAAGACTGAACCCGACTCCCAGCTTACTCCAGATTCTGCAAATCGCACTG
rJMSF034F14+          AACCACCACGAAAGACTGAACCCGACTCCCAGCTTACTCCAGATTCTGCAAATCGCACTG
                      ____________________________________________________________
consensus             AACCACCACGAAAGACTGAACCCGACTCCCAGCTTACTCCAGATTCTGCAAATCGCACTG
 
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rJMSF007G03+          CAGTCGAATGCAGCCCCATGGATGATACACATACAGATGAAAGAAATGAAACCAACAACC
rJMSF034F14+          CAGTCGAATGCAGCCCCATGGATGATACACATACAGATGAAAGAAATGAAACCAACAACC
                      ____________________________________________________________
consensus             CAGTCGAATGCAGCCCCATGGATGATACACATACAGATGAAAGAAATGAAACCAACAACC
 
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rJMSF007G03+          AGTAGTTCCATTTTTTTTAGGTTTTCTAGCGCCATAATCTGTAGTTTTTGATTGTTTTGT
rJMSF034F14+          AGTAGTTCCATTTTTTTTAGGTTTTCTAGCGCCATAATCTGTAGTTTTTGATTGTTTTGT
                      ____________________________________________________________
consensus             AGTAGTTCCATTTTTTTTAGGTTTTCTAGCGCCATAATCTGTAGTTTTTGATTGTTTTGT
 
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rJMSF007G03+          TGTATAGTGTTTACCTGTGATATGAAATTNATAGACTTGTAGTTTTCTCAGAATTT    
rJMSF034F14+          TGTATAGTGTTTACCTGTGATATGAAATTTATAGACTTGTAGTTTTCTCAGAATTTGAAG
                      ____________________________________________________________
consensus             TGTATAGTGTTTACCTGTGATATGAAATTTATAGACTTGTAGTTTTCTCAGAATTTGAAG