Contig 001414:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF032E20Sequence690004772 (10)ref|XP_008392230.1|2e-104PREDICTED: zinc-metallopeptidase, peroxisomal-like [Malus domestica]713001414 (2)ref|XP_009798227.1|6e-90PREDICTED: zinc-metallopeptidase, peroxisomal [Nicotiana sylvestris]
JMSF040B13Sequence641004772 (10)ref|XP_008392230.1|7e-94PREDICTED: zinc-metallopeptidase, peroxisomal-like [Malus domestica]803001414 (2)ref|XP_009798227.1|3e-116PREDICTED: zinc-metallopeptidase, peroxisomal [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF040B13+                    CAAGTGATGAAANTTCTGCTCTCCATCATTATATACAGGTGCATCAAGAT
                      ____________________________________________________________
consensus                       CAAGTGATGAAANTTCTGCTCTCCATCATTATATACAGGTGCATCAAGAT
 
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rJMSF040B13+          GATTTCTTGCTGAATGTCAAACTTCAGCTTTTTGCTCTGATGGCAAAGCAGCCAGCTTTT
                      ____________________________________________________________
consensus             GATTTCTTGCTGAATGTCAAACTTCAGCTTTTTGCTCTGATGGCAAAGCAGCCAGCTTTT
 
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rJMSF040B13+          CATCAACTTAGATCAGTTGAGCAACTTGGCTATATTACTGTGCTTCTGACCCGGAATGAT
rJMSF032E20+                 TTAGATCAGTTGAGCAACTTGGCTATATTACTGTACTTCTGACCCGGAATGAT
                      ____________________________________________________________
consensus             CATCAACTTAGATCAGTTGAGCAACTTGGCTATATTACTGTGCTTCTGACCCGGAATGAT
 
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rJMSF040B13+          TTCGGTGTTCTTGGAGTGCAATTTATCATTCAATCTACAGCTAAGGACCCTAAACATATT
rJMSF032E20+          TTCGGTGTTCTTGGAGTGCAATTTATCATTCAATCTACAGCTAAGGACCCTAAACATATT
                      ____________________________________________________________
consensus             TTCGGTGTTCTTGGAGTGCAATTTATCATTCAATCTACAGCTAAGGACCCTAAACATATT
 
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rJMSF040B13+          GACTCACGAGTCGAGGAATTTTTGAAGATGTTTGAGAGTAAACTTTATGAGATGGCAGAT
rJMSF032E20+          GACTCACGAGTCGAGGAATTTTTGAAGATGTTTGAGAGTAAACTTTATGAGATGGCAGAT
                      ____________________________________________________________
consensus             GACTCACGAGTCGAGGAATTTTTGAAGATGTTTGAGAGTAAACTTTATGAGATGGCAGAT
 
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rJMSF040B13+          GATGAATTTAAGAGCAATGTCACTGCACTTATCGATATGAAGCTTGAGAAGCACAAGAAT
rJMSF032E20+          GATGAATTTAAGAGCAATGTCACTGCACTTATCGATGTGAAGCTTGAGAAGCACAAGAAT
                      ____________________________________________________________
consensus             GATGAATTTAAGAGCAATGTCACTGCACTTATCGATGTGAAGCTTGAGAAGCACAAGAAT
 
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rJMSF040B13+          TTACGAGAAGAATCTCGATTTTACTGGAGGGAAATTTTTGATGGGACTCTAAAATTTGAT
rJMSF032E20+          TTACGAGAAGAATCTCGATTTTACTGGAGGGAAATTTTTGATGGGACTCTAAAATTTGAT
                      ____________________________________________________________
consensus             TTACGAGAAGAATCTCGATTTTACTGGAGGGAAATTTTTGATGGGACTCTAAAATTTGAT
 
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rJMSF040B13+          AGGAGGGAACATGAGGTTGAAGCACTCAAGAAGCTGACTAAAAAAGACCTGATTGAATTC
rJMSF032E20+          AGGAGGGAACATGAGGTTGAAGCACTCAAGAAGCTGACTAAAAAAGACCTGATTGAATTC
                      ____________________________________________________________
consensus             AGGAGGGAACATGAGGTTGAAGCACTCAAGAAGCTGACTAAAAAAGACCTGATTGAATTC
 
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rJMSF040B13+          TTTGACGAACACATAAAAGCTGGTGCCCCGCAGAAGAAGTCACTAAGCATCCAAGTATAT
rJMSF032E20+          TTTGACGAACACATAAAAGCTGGTGCCCCGCAGAAGAAGTCACTAAGCATCCAAGTATAT
                      ____________________________________________________________
consensus             TTTGACGAACACATAAAAGCTGGTGCCCCGCAGAAGAAGTCACTAAGCATCCAAGTATAT
 
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rJMSF040B13+          GGCAGCTCTCATTCTGCCGAGTTCAAGGCACACCAAAATGAGCCGGTTGAACAACACGTT
rJMSF032E20+          GGCAGCTCTCATTCTGCCGAGTTCAAGGCACACCAAAATGAGCCGGTTGAACAACACGTT
                      ____________________________________________________________
consensus             GGCAGCTCTCATTCTGCCGAGTTCAAGGCACACCAAAATGAGCCGGTTGAACAACACGTT
 
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rJMSF040B13+          GTTCGGGTAGAAGATATATTCAGTTTCAGGCGATCTCACGAGCTCTACGGTTCATTCAAA
rJMSF032E20+          GTTCGGGTAGAAGATATATTCAGTTTCAGGCGATCTCACGAGCTCTACGGTTCATTCAAA
                      ____________________________________________________________
consensus             GTTCGGGTAGAAGATATATTCAGTTTCAGGCGATCTCACGAGCTCTACGGTTCATTCAAA
 
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rJMSF040B13+          GGAGGCCTTGGTTTTATGAAGCTGTAGGAGGTGAGAGTGCCTCAGCGGCTCAGATCAGCA
rJMSF032E20+          GGAGGCCTTGGTTTTATGAAGCTGTAGGAGGTGAGAGTGCCTCAGCGGCTCAGATCAGCA
                      ____________________________________________________________
consensus             GGAGGCCTTGGTTTTATGAAGCTGTAGGAGGTGAGAGTGCCTCAGCGGCTCAGATCAGCA
 
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rJMSF040B13+          TTGTGTGAGTTAAAAAGCCTTTGTTTTGAACTCTTCATTTTATAGAAGTTCAGAAAATAA
rJMSF032E20+          TTGTGTGAGTTAAAAAGCCTTTGTTTTGAACTCTTCATTTTATAGAAGTTCAGAAAATAA
                      ____________________________________________________________
consensus             TTGTGTGAGTTAAAAAGCCTTTGTTTTGAACTCTTCATTTTATAGAAGTTCAGAAAATAA
 
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rJMSF040B13+          TGGATTAGTGATGGTATACATTTGCCACAACTA                           
rJMSF032E20+          TGGATTAGTGATGGTATACATTTGCCACAACTATTTGTTACCAACCAGGGCAATACATAT
                      ____________________________________________________________
consensus             TGGATTAGTGATGGTATACATTTGCCACAACTATTTGTTACCAACCAGGGCAATACATAT