Contig 001408:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF012D07Sequence451002311 (4)ref|XP_006405868.1|3e-50hypothetical protein EUTSA_v100276400mg, partial [Eutrema salsugineum] gb|ESQ473164001408 (2)
JMSF031A08Sequence662002311 (4)ref|XP_006372512.1|7e-100hypothetical protein POPTR_0017s023401g, partial [Populus trichocarpa] gb|ERP503177001408 (2)

Alignment

This contig is upended


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rJMSF012D07+                                                                   NTN
                      ____________________________________________________________
consensus                                                                      NTN
 
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rJMSF012D07+          TTTTTTTTTTTTTTTGGTGTGGTGTAGAGAGCACAACATTTATATCAAATGTGGGAACAA
rJMSF031A08+             TTTTTTTTTTTTTTTGTGGTGTAGAGAGCACAACATTTATATCAAATGTGGGAACAA
                      ____________________________________________________________
consensus             TTTTTTTTTTTTTTTTTTGTGGTGTAGAGAGCACAACATTTATATCAAATGTGGGAACAA
 
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rJMSF012D07+          CCACATTGGTAGGCAGCCTGTTAAGGAAAATTNCAGGAAAAAAAGGTACAAACAGCAAAC
rJMSF031A08+          CCACATTGGTAGGCAGCCTGTTAAGGAAAATTACAGGAAAAAAAGGTACAAACAGCAAAC
                      ____________________________________________________________
consensus             CCACATTGGTAGGCAGCCTGTTAAGGAAAATTACAGGAAAAAAAGGTACAAACAGCAAAC
 
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rJMSF012D07+          CAAAATTACATTGCCATTT                                         
rJMSF031A08+          CAAAATTACATTGCCATTTATGNGAATTTTANGTATGGCACTAAGGCTTCAGGTCTGCTG
                      ____________________________________________________________
consensus             CAAAATTACATTGCCATTTATGNGAATTTTANGTATGGCACTAAGGCTTCAGGTCTGCTG