Contig 001405:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF030E12Sequence686001405 (3)ref|XP_009757327.1|1e-117PREDICTED: probable pinoresinol-lariciresinol reductase 3 isoform X2 [Nicotiana745001405 (3)ref|XP_011088413.1|4e-112PREDICTED: probable pinoresinol-lariciresinol reductase 3 isoform X2 [Sesamum i
JMSF036G20Sequence115021125ref|XP_007042165.1|3e-05Adenine nucleotide alpha hydrolases-like superfamily protein isoform 1 [Theobro731001405 (3)ref|XP_011088413.1|2e-108PREDICTED: probable pinoresinol-lariciresinol reductase 3 isoform X2 [Sesamum i

Alignment

This contig is upended


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JMSF030E12-                            GGAGTTTCGGAAGCCGGAGCTCCGGTGGTTAGGACTTAGGATA
                      ____________________________________________________________
consensus                              GGAGTTTCGGAAGCCGGAGCTCCGGTGGTTAGGACTTAGGATA
 
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JMSF030E12-           ACGACGGCGGTATGGAGATGAAGGCGGAGAAGAGCAAGATATTAGTAATCGGAGTAACAG
                      ____________________________________________________________
consensus             ACGACGGCGGTATGGAGATGAAGGCGGAGAAGAGCAAGATATTAGTAATCGGAGTAACAG
 
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JMSF030E12-           GGCGGCTAGGTTTTGAGCTAGCTAAGGCCAGCATCAACGCCTCTCATCCTACATTCGGCC
                      ____________________________________________________________
consensus             GGCGGCTAGGTTTTGAGCTAGCTAAGGCCAGCATCAACGCCTCTCATCCTACATTCGGCC
 
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JMSF030E12-           TCGTCAGAGACTCCGCATTTTCCGATCCCCACAAATCACAAAAACTTCACTTGCTCTCCC
                      ____________________________________________________________
consensus             TCGTCAGAGACTCCGCATTTTCCGATCCCCACAAATCACAAAAACTTCACTTGCTCTCCC
 
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JMSF030E12-           ACTCCGGCGTCACGCTTCTTAAGGGTTCATTGCAAGATGAAGAAAGCCTCATTGAAGCAA
                      ____________________________________________________________
consensus             ACTCCGGCGTCACGCTTCTTAAGGGTTCATTGCAAGATGAAGAAAGCCTCATTGAAGCAA
 
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JMSF030E12-           TCAAGCGAGTTGATGTTGTAATATGTGCCGTTTCATCGAAGCAAGTCCCGGAGCAAAAGC
                      ____________________________________________________________
consensus             TCAAGCGAGTTGATGTTGTAATATGTGCCGTTTCATCGAAGCAAGTCCCGGAGCAAAAGC
 
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JMSF030E12-           TTCTTATTCCGGCTATCAAAAAAGCTGGTTGCGTCAAGAGGTTCATTCCTTCAGAATTTG
rJMSF036G20+                                                          CTTCAGAATTTG
rJMSF030E12+                                             AAGAGGTTCANTCCTTCAGAATTTG
                      ____________________________________________________________
consensus             TTCTTATTCCGGCTATCAAAAAAGCTGGTTGCGTCAAGAGGTTCATTCCTTCAGAATTTG
 
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JMSF030E12-           GGTTGGATGCTGACAAAACACGGGTTTCCAACATGGATAACAACTTCTATTCAAATAAAG
rJMSF036G20+          GGNTGGATGCTGACAAAACACGGGTTTCCAACATGGATAACAACTTCTATTCAAATAAAG
rJMSF030E12+          GGTTGGATGCTGACAAAACACGGGTTTCCAACATGGATAACAACTTCTATTCAAATAAAG
                      ____________________________________________________________
consensus             GGTTGGATGCTGACAAAACACGGGTTTCCAACATGGATAACAACTTCTATTCAAATAAAG
 
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JMSF030E12-           CTGAAATTAGGCGAATTGTTGAAGCTGAAGGCATTCCTTACACCTTGGTCTGCTGCAACT
rJMSF036G20+          CTGAAATTAGGCGAATTGTTGAAGCTGAAGGCATTCCTTACACCTTGGTCTGCTGCAACT
rJMSF030E12+          CTGAAATTAGGCGAATTGTTGAAGCTGAAGGCATTCCTTACACCTTGGTCTGCTGCAACT
                      ____________________________________________________________
consensus             CTGAAATTAGGCGAATTGTTGAAGCTGAAGGCATTCCTTACACCTTGGTCTGCTGCAACT
 
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JMSF030E12-           TCTTCACAAGTTATTTATTGCCATCGCTTGTTCAGCCAGGCCTGAAAGCCCCTCCNAGAG
rJMSF036G20+          TCTTCACAAGTTATTTATTGCCATCGCTTGTTCAGCCAGGCCTGAAAGCCCCTCCAAGAG
rJMSF030E12+          TCTTCACAAGTTATTTATTGCCATCGCTTGTTCAGCCAGGCCTGAAAGCCCCTCCAAGAG
                      ____________________________________________________________
consensus             TCTTCACAAGTTATTTATTGCCATCGCTTGTTCAGCCAGGCCTGAAAGCCCCTCCAAGAG
 
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JMSF030E12-           ACAAAGTCAGTATATTTGGAGACGGAACTGTTAAAGGTGTATTCATGAAGGAAAATGATG
rJMSF036G20+          ACAAAGTCAGTATATTTGGAGACGGAACTGTTAAAGGTGTATTCATGAAGGAAAATGATG
rJMSF030E12+          ACAAAGTCAGTATATTTGGAGACGGAACTGTTAAAGGTGTATTCATGAAGGAAAATGATG
                      ____________________________________________________________
consensus             ACAAAGTCAGTATATTTGGAGACGGAACTGTTAAAGGTGTATTCATGAAGGAAAATGATG
 
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JMSF030E12-           TTGCTGCTTTTACCATCAACACAGTGGATGATCCGCGAACATT                 
rJMSF036G20+          TTGCTGCTTTTACCATCAACACAGTGGATGATCCGCGAACATTGAATAAAGTGCTATACC
rJMSF030E12+          TTGCTGCTTTTACCATCAACACAGTGGATGATCCGCGAACATTGAATAAAGTGCTATACC
                      ____________________________________________________________
consensus             TTGCTGCTTTTACCATCAACACAGTGGATGATCCGCGAACATTGAATAAAGTGCTATACC
 
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rJMSF036G20+          TTAGGCCGCCTGGAAATGTATGTTCTATGAATGAGTTGGTTGAGATCTGGGAGGGAAAAA
rJMSF030E12+          TTAGGCCGCCTGGAAATGTATGTTCTATGAATGAGTTGGTTGAGATCTGGGAGGGAAAAA
                      ____________________________________________________________
consensus             TTAGGCCGCCTGGAAATGTATGTTCTATGAATGAGTTGGTTGAGATCTGGGAGGGAAAAA
 
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rJMSF036G20+          TTAGTAAGAAACTGGAGAAGAACTATGTATCAGAAGAGGAACTCCTAATGAAGATTAAAG
rJMSF030E12+          TTAGTAAGAAACTGGAGAAGAACTATGTATCAGAAGAGGAACTCCTAATGAAGATTAAAG
                      ____________________________________________________________
consensus             TTAGTAAGAAACTGGAGAAGAACTATGTATCAGAAGAGGAACTCCTAATGAAGATTAAAG
 
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rJMSF036G20+          CAACTCCCTATCCTGACAATATGGAGATGGTTTTCATATACTCTGCATTTGTCAAAGGGG
rJMSF030E12+          CAACTCCCTATCCTGACAATATGGAGATGGTTTTCATATACTCTGCATTTGTCAAAGGGG
                      ____________________________________________________________
consensus             CAACTCCCTATCCTGACAATATGGAGATGGTTTTCATATACTCTGCATTTGTCAAAGGGG
 
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rJMSF036G20+          ATCAGACCTACTTTGATGTTGAACTGGAAGGGTCACAACTTTATCCACATACAAAATACA
rJMSF030E12+          ATCAGACCTACTTTGATGTTGAACTGGAAGGGTCACAACTTTATCCACATACAAAATACA
                      ____________________________________________________________
consensus             ATCAGACCTACTTTGATGTTGAACTGGAAGGGTCACAACTTTATCCACATACAAAATACA
 
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rJMSF036G20+          CCACCATAAGCGAGTTTCTTGAAACGCTGGTGTAAGATCCCCTGTTGTGGAATATTCATC
rJMSF030E12+          CCACCATAAGCGAGTTTCTTGAAACGCTGGTGTAAGATCCCCTGTTGTGGAATATTCATC
                      ____________________________________________________________
consensus             CCACCATAAGCGAGTTTCTTGAAACGCTGGTGTAAGATCCCCTGTTGTGGAATATTCATC
 
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rJMSF036G20+          TACATTCGGAACTAGTATGTCTCTTTTAATGCATAGCGAGGTTTACAATTCATGCGAGTG
rJMSF030E12+          TACATTCGGAACTAGTATGTCTCTTTTAATGCATAGCGAGGTTTACAATTCATGCGAGTG
                      ____________________________________________________________
consensus             TACATTCGGAACTAGTATGTCTCTTTTAATGCATAGCGAGGTTTACAATTCATGCGAGTG
 
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rJMSF036G20+          CACTTTTCTTTAGTGTCATTGTTGCTTGGACTGGATTGTCAATGTCCTTTTATGAACCT 
rJMSF030E12+          CACTTTTCTTTAGTGTCATTGTTGCTTGGACTGGATTGTCAATGTCCTTTTATGAACCTT
                      ____________________________________________________________
consensus             CACTTTTCTTTAGTGTCATTGTTGCTTGGACTGGATTGTCAATGTCCTTTTATGAACCTT