| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF014F11 | Sequence | 594 | 005150 (7) | emb|CDH92856.1| | 2e-86 | omega-6 fatty acid desaturase, partial [Sesamum radiatum] | 828 | 001402 (9) | gb|ABZ05022.1| | 9e-125 | delta-12 fatty acid desaturase [Davidia involucrata] |
| JMFF028H03 | Sequence | 495 | 010308 (2) | emb|CDH92856.1| | 8e-57 | omega-6 fatty acid desaturase, partial [Sesamum radiatum] | 638 | 001402 (9) | gb|AIC34705.1| | 2e-85 | omega-6 fatty acid desaturase [Rhus chinensis] gb|AIC34706.1| omega-6 fatty acid |
| JMFF033H18 | Sequence | 571 | 005150 (7) | emb|CDH92856.1| | 7e-97 | omega-6 fatty acid desaturase, partial [Sesamum radiatum] | 728 | 001402 (9) | gb|AIC34705.1| | 2e-99 | omega-6 fatty acid desaturase [Rhus chinensis] gb|AIC34706.1| omega-6 fatty acid |
| JMFF045M08 | Sequence | 628 | 010308 (2) | emb|CDH92856.1| | 3e-90 | omega-6 fatty acid desaturase, partial [Sesamum radiatum] | 620 | 001402 (9) | gb|AIC34705.1| | 3e-77 | omega-6 fatty acid desaturase [Rhus chinensis] gb|AIC34706.1| omega-6 fatty acid |
| JMFF049J02 | Sequence | 631 | 005150 (7) | emb|CDH92856.1| | 1e-82 | omega-6 fatty acid desaturase, partial [Sesamum radiatum] | 582 | 001402 (9) | gb|AIC34705.1| | 1e-74 | omega-6 fatty acid desaturase [Rhus chinensis] gb|AIC34706.1| omega-6 fatty acid |
| JMSF016O19 | Sequence | 252 | 005150 (7) | emb|CDH92856.1| | 6e-07 | omega-6 fatty acid desaturase, partial [Sesamum radiatum] | 755 | 001402 (9) | gb|AIC34705.1| | 2e-116 | omega-6 fatty acid desaturase [Rhus chinensis] gb|AIC34706.1| omega-6 fatty acid |
| JMSF030B23 | Sequence | 637 | 005150 (7) | emb|CDH92856.1| | 9e-99 | omega-6 fatty acid desaturase, partial [Sesamum radiatum] | 730 | 001402 (9) | gb|AIC34705.1| | 2e-100 | omega-6 fatty acid desaturase [Rhus chinensis] gb|AIC34706.1| omega-6 fatty acid |
| JMSF042N07 | Sequence | 783 | 005150 (7) | emb|CDP17521.1| | 3e-134 | unnamed protein product [Coffea canephora] | 692 | 001402 (9) | gb|AIC34705.1| | 6e-101 | omega-6 fatty acid desaturase [Rhus chinensis] gb|AIC34706.1| omega-6 fatty acid |
| JMSF048H05 | Sequence | 646 | 005150 (7) | emb|CDH92856.1| | 2e-102 | omega-6 fatty acid desaturase, partial [Sesamum radiatum] | 692 | 001402 (9) | gb|AIC34705.1| | 6e-101 | omega-6 fatty acid desaturase [Rhus chinensis] gb|AIC34706.1| omega-6 fatty acid |
This contig is upended
. : . : . : . : . : . :
rJMFF014F11+ TAACAATGA
____________________________________________________________
consensus TAACAATGA
. : . : . : . : . : . :
rJMSF016O19+ TTTGGCTTTCAATGTGTCTGGCAGACATT
rJMFF014F11+ CTATTACTCTTACTCTTGGTTGGCCATTATATTTGGCTTTCAATGTGTCTGGCAGACATT
____________________________________________________________
consensus CTATTACTCTTACTCTTGGTTGGCCATTATATTTGGCTTTCAATGTGTCTGGCAGACATT
. : . : . : . : . : . :
rJMSF016O19+ ATGACAGATATGCATGCCATTATGATCCTTATGGCCCCATCTTCAATGCTCGTGAGAGGC
rJMSF048H05+ TCTTCAATGCTCGTGAGAGGC
rJMSF042N07+ TCTTCAATGCTCGTGAGAGGC
rJMFF014F11+ ATGACAGATATGCATGCCATTATGATCCTTATGGCCCAATCTTCAATGCTCGTGAGAGGC
rJMFF033H18+ GTGAGAGGC
rJMSF030B23+ CGTGAGAGGC
____________________________________________________________
consensus ATGACAGATATGCATGCCATTATGATCCTTATGGCCCCATCTTCAATGCTCGTGAGAGGC
. : . : . : . : . : . :
rJMSF016O19+ TTCAGGTCTTCATTTCTGATGCTGGTATTTTTGCTACAACATATGTGCTTTACCGCCTTG
rJMSF048H05+ TTCAGGTCTTCATTTCTGATGCTGGTATTTTTGCTACAACATATGTGCTTTACCGCCTTG
rJMSF042N07+ TTCAGGTCTTCATTTCTGATGCTGGTATTTTTGCTACAACATATGTGCTTTACCGCCTTG
rJMFF014F11+ TTCAGGTCTTCATTTCTGATGCTGGTATTTTTGCTACAACATATGTGCTTTACCGCCTTG
rJMFF033H18+ TTCAGGTCTTCATTTCTGATGCTGGTATTTTTGCTACAACATATGTGCTTTACCGCCTTG
rJMSF030B23+ TTCAGGTCTTCATTTCTGATGCTGGTATTTTTGCTACAACATATGTGCTTTACCGCCTTG
____________________________________________________________
consensus TTCAGGTCTTCATTTCTGATGCTGGTATTTTTGCTACAACATATGTGCTTTACCGCCTTG
. : . : . : . : . : . :
rJMSF016O19+ CTATGCTTAAAGGGATAACTTGGGTCATCTGCATCTATGGGGTTCCTTTGCTTATTGTCA
rJMSF048H05+ CTATGCTTAAAGGGATAACTTGGGTCATCTGCATCTATGGGGTTCCTTTGCTTATTGTCA
rJMSF042N07+ CTATGCTTAAAGGGATAACTTGGGTCATCTGCATCTATGGGGTTCCTTTGCTTATTGTCA
rJMFF014F11+ CTATGCTTAAAGGGATAACTTGGGTCATCTGCATCTATGGGGTTCCTTTGCTTATTGTCA
rJMFF028H03+ CTATGCTTAAAGGGATAACTTGGGTCATCTGCATCTATGGGGTTCCTTTGCTTATTGTCA
rJMFF045M08+ ATGGGGTTCCTTGCTTTATTGTCA
rJMFF049J02+ TTGTCA
rJMFF033H18+ CTATGCTTAAAGGGATAACTTGGGTCATCTGCATCTATGGGGTTCCTTTGCTTATTGTCA
rJMSF030B23+ CTATGCTTAAAGGGATAACTTGGGTCATCTGCATCTATGGGGTTCCTTTGCTTATTGTCA
____________________________________________________________
consensus CTATGCTTAAAGGGATAACTTGGGTCATCTGCATCTATGGGGTTCCTTTGCTTATTGTCA
. : . : . : . : . : . :
rJMSF016O19+ ATGGCTTTCTTGTTCTGATCACATATCTGCAGCACACCCACCCAGCATTGCCACACTATG
rJMSF048H05+ ATGGCTTTCTTGTTCTGATCACATATCTGCAGCACACCCACCCAGCATTGCCACACTATG
rJMSF042N07+ ATGGCTTTCTTGTTCTGATCACATATCTGCAGCACACCCACCCAGCATTGCCACACTATG
rJMFF014F11+ ATGGCTTTCTTGTTCTGATCACATATCTGCAGCACACCCACCCAGCATTGCCACACTATG
rJMFF028H03+ ATGGCTTTCTTGTTCTGATCACATATCTGCAGCACACCCACCCAGCATTGCCACACTATG
rJMFF045M08+ ATGGCTTTCTNGTTCTGATCACATATCTGCAGCACACCCACCCAGCATTGCCACACTATG
rJMFF049J02+ ATGGCTTTCTTGTTCTGATCACATATCTGCAGCACACCCACCCAGCATTGCCACACTATG
rJMFF033H18+ ATGGCTTTCTTGTTCTGATCACATATCTGCAGCACACCCACCCAGCATTGCCACACTATG
rJMSF030B23+ ATGGCTTTCTTGTTCTGATCACATATCTGCAGCACACCCACCCAGCATTGCCACACTATG
____________________________________________________________
consensus ATGGCTTTCTTGTTCTGATCACATATCTGCAGCACACCCACCCAGCATTGCCACACTATG
. : . : . : . : . : . :
rJMSF016O19+ ACTCGTCCGAGTGGGATTGGCTAAGGGGAGCTTTGGCCACCGTCGATAGAGATTATGGAG
rJMSF048H05+ ACTCGTCCGAGTGGGATTGGCTAAGGGGAGCTTTGGCCACCGTCGATAGAGATTATGGAG
rJMSF042N07+ ACTCGTCCGAGTGGGATTGGCTAAGGGGAGCTTTGGCCACCGTCGATAGAGATTATGGAG
rJMFF014F11+ ACTCGTCCGAGTGGGATTGGCTAAGGGGAGCTTTGGCCACCGTCGATAGAGATTATGGAG
rJMFF028H03+ ACTCGTCCGAGTGGGATTGGCTAAGGGGAGCTTTGGCCACCGTCGATAGAGATTATGGAG
rJMFF045M08+ ACTCGTCCGAGTGGGATTGGCTAAGGGGAGCTTTGGCCACCGTCGATAGAGATTATGGAG
rJMFF049J02+ ACTCGTCCGAGTGGGATTGGCTAAGGGGAGCTTTGGCCACCGTCGATAGAGATTATGGAG
rJMFF033H18+ ACTCGTCCGAGTGGGATTGGCTAAGGGGAGCTTTGGCCACCGTCGATAGAGATTATGGAG
rJMSF030B23+ ACTCGTCCGAGTGGGATTGGCTAAGGGGAGCTTTGGCCACCGTCGATAGAGATTATGGAG
____________________________________________________________
consensus ACTCGTCCGAGTGGGATTGGCTAAGGGGAGCTTTGGCCACCGTCGATAGAGATTATGGAG
. : . : . : . : . : . :
rJMSF016O19+ TGCTAAACAAGGTTTTCCACAACATAACCGACACTCATATAGCTCACCATCTCTTTTCAA
rJMSF048H05+ TGCTAAACAAGGTTTTCCACAACATAACCGACACTCATATAGCTCACCATCTCTTTTCAA
rJMSF042N07+ TGCTAAACAAGGTTTTCCACAACATAACCGACACTCATATAGCTCACCATCTCTTTTCAA
rJMFF014F11+ TGCTAAACAAGGTTTTCCACAACATAACCGACACTCATATAGCTCACCATCTCTTTTCAA
rJMFF028H03+ TGCTAAACAAGGTTTTCCACAACATAACCGACACTCATATAGCTCACCATCTCTTTTCAA
rJMFF045M08+ TGCTAAACAAGGTTTTCCACAACATAACCGACACTCATATAGCTCACCATCTCTTTTCAA
rJMFF049J02+ TGCTAAACAAGGTTTTCCACAACATAACCGACACTCATATAGCTCACCATCTCTTTTCAA
rJMFF033H18+ TGCTAAACAAGGTTTTCCACAACATAACCGACACTCATATAGCTCACCATCTCTTTTCAA
rJMSF030B23+ TGCTAAACAAGGTTTTTCACAACATAACCGACACTCATATAGCTCACCATCTCTTTTCAA
____________________________________________________________
consensus TGCTAAACAAGGTTTTCCACAACATAACCGACACTCATATAGCTCACCATCTCTTTTCAA
. : . : . : . : . : . :
rJMSF016O19+ CCATGCCACACTACAATGCAATGGAGGCAACCAAAGCAATCAGGCCGATACTTGGAGAGT
rJMSF048H05+ CCATGCCACACTACAATGCAATGGAGGCAACCAAAGCAATCAGGCCGATACTTGGAGAGT
rJMSF042N07+ CCATGCCACACTACAATGCAATGGAGGCAACCAAAGCAATCAGGCCGATACTTGGAGAGT
rJMFF014F11+ CCATGCCACACTACAATGCAATGGAGGCAACCAAAGCAATCAGGCCGATACTTGGAGAGT
rJMFF028H03+ CCATGCCACACTACAATGCAATGGAGGCAACCAAAGCAATCAGGCCGATACTTGGAGAGT
rJMFF045M08+ CCATGCCACACTACAATGCAATGGAGGCAACCAAAGCAATCAGGCCGATACTTGGAGAGT
rJMFF049J02+ CCATGCCACACTACAATGCAATGGAGGCAACCAAAGCAATCAGGCCGATACTTGGAGAGT
rJMFF033H18+ CCATGCCACACTACAATGCAATGGAGGCAACCAAAGCAATCAGGCCGATACTTGGAGAGT
rJMSF030B23+ CCATGCCACACTACAATGCAATGGAGGCAACCAAAGCAATCAGGCCGATACTTGGAGAGT
____________________________________________________________
consensus CCATGCCACACTACAATGCAATGGAGGCAACCAAAGCAATCAGGCCGATACTTGGAGAGT
. : . : . : . : . : . :
rJMSF016O19+ ACTACCAAATTGATCGCACTCCATTTTACAAAGCAATGTGGAGAGAGGCAAGAGAGTGTC
rJMSF048H05+ ACTACCAAATTGATCGCACTCCATTTTACAAAGCAATGTGGAGAGAGGCAAGAGAGTGTC
rJMSF042N07+ ACTACCAAATTGATCGCACTCCATTTTACAAAGCAATGTGGAGAGAGGCAAGAGAGTGTC
rJMFF014F11+ ACTACCAAATTGATCGCACTCCATTTTACAAAGCAATGTGGAGAGAGGCAAGAGAGTGTC
rJMFF028H03+ ACTACCAAATTGATCGCACTCCATTTTACAAAGTAATGTGGAGAGAGGCAAGAGAGTGTC
rJMFF045M08+ ACTACCAAATTGATCGCACTCCATTTTACAAAGCAATGTGGAGAGAGGCAAGAGAGTGTC
rJMFF049J02+ ACTACCAAATTGATCGCACTCCATTTTACAAAGCAATGTGGAGAGAGGCAAGAGAGTGTC
rJMFF033H18+ ACTACCAAATTGATCGCACTCCATTTTACAAAGCAATGTGGAGAGAGGCAAGAGAGTGTC
rJMSF030B23+ ACTACCAAATTGATCGCACTCCATTTTACAAAGCAATGTGGAGAGAGGCAAGAGAGTGTC
____________________________________________________________
consensus ACTACCAAATTGATCGCACTCCATTTTACAAAGCAATGTGGAGAGAGGCAAGAGAGTGTC
. : . : . : . : . : . :
rJMSF016O19+ TCTACGTCGAGCCAGATGAGGGTTCTCAAGTGAAGGGCGTGTATTGGTACAGAAACAAGC
rJMSF048H05+ TCTACGTCGAGCCAGATGAGGGTTCTCAAGTGAAGGGCGTGTATTGGTACAGAAACAAGC
rJMSF042N07+ TCTACGTCGAGCCAGATGAGGGTTCTCAAGTGAAGGGCGTGTATTGGTACAGAAACAAGC
rJMFF014F11+ TCTACGTCGAGCCAGATGAGGGTTCTCAAGTGAAGGGCGTGTATTGGTACAGAAACAAGC
rJMFF028H03+ TCTACGTCGAGCCAGATGAGGGTTCTCAAGTGAAGGGCGTGTATTGGTACAGAAACAAGC
rJMFF045M08+ TCTACGTCGAGCCAGATGAGGGTTCTCAAGTGAAGGGCGTGTATTGGTACAGAAACAAGC
rJMFF049J02+ TCTACGTCGAGCCAGATGAGGGTTCTCAAGTGAAGGGCGTGTATTGGTACAGAAACAAGC
rJMFF033H18+ TCTACGTCGAGCCAGATGAGGGTTCTCAAGTGAAGGGCGTGTATTGGTACAGAAACAAGC
rJMSF030B23+ TCTACGTCGAGCCAGATGAGGGTTCTCAAGTGAAGGGCGTGTATTGGTACAGAAACAAGC
____________________________________________________________
consensus TCTACGTCGAGCCAGATGAGGGTTCTCAAGTGAAGGGCGTGTATTGGTACAGAAACAAGC
. : . : . : . : . : . :
rJMSF016O19+ TCGAGTAAAACTCGTGTGTGAAGTTTATCTCTTGCTGGTCAAGTCCCCATGATGGCAACT
rJMSF048H05+ TCGAGTAAAACTCGTGTGTGAAGTTTATCTCTTGCTGGTCAAGTCCCCATGATGGCAACT
rJMSF042N07+ TCGAGTAAAACTCGTGTGTGAAGTTTATCTCTTGCTGGTCAAGTCCCCATGATGGCAACT
rJMFF014F11+ TCGAGTAAAACTCGTGTGTGAAGTTTATCTCTTGCTGGTCAAGTCCCCATGATGGCAACT
rJMFF028H03+ TCGAGTAAAACTCGTGTGTGAAGTTTATCTCTTGCTGGTCAAGTCCCCATGATGGCAACT
rJMFF045M08+ TCGAGTAAAACTCGTGTGTGAAGTTTATCTCTTGCTGGTCAAGTCCCCATGATGGCAACT
rJMFF049J02+ TCGAGTAAAACTCGTGTGTGAAGTTTATCTCTTGCTGGTCAAGTCCCCATGATGGCAACT
rJMFF033H18+ TCGAGTAAAACTCGTGTGTGAAGTTTATCTCTTGCTGGTCAAGTCCCCATGATGGCAACT
rJMSF030B23+ TCGAGTAAAACTCGTGTGTGAAGTTTATCTCTTGCTGGTCAAGTCCCCATGATGGCAACT
____________________________________________________________
consensus TCGAGTAAAACTCGTGTGTGAAGTTTATCTCTTGCTGGTCAAGTCCCCATGATGGCAACT
. : . : . : . : . : . :
rJMSF016O19+ TATAGTTTGGGTCTATACAGGTACTTCGGTTACTTAAGGTTGTAGTAACTAGTGAGTTTA
rJMSF048H05+ TATAGTTTGGGTCTATACAGGTACTTCGGTTACTTAAGGTTGTAGTAACTAGTGAGTTTA
rJMSF042N07+ TATAGTTTGGGTCTATACAGGTACTTCGGTTACTTAAGGTTGTAGTAACTAGTGAGTTTA
rJMFF014F11+ TATAGTTTGGGTCTATACAGGTACTTCGGTTACTTAAGGTTGTAGTAACTAGTGAGTTTA
rJMFF028H03+ TATAGTTTGGGTCTATACAGGTACTTCGGTTACTTAAGGTTGTAGTAACTAGTGAGTTTA
rJMFF045M08+ TATAGTTTGGGTCTATACAGGTACTTCGGTTACTTAAGGTTGTAGTAACTAGTGAGTTTA
rJMFF049J02+ TATAGTTTGGGTCTATACAGGTACTTCGGTTACTTAAGGTTGTAGTAACTAGTGAGTTTA
rJMFF033H18+ TATAGTTTGGGTCTATACAGGTACTTCGGTTACTTAAGGTTGTAGTAACTAGTGAGTTTA
rJMSF030B23+ TATAGTTTGGGTCTATACAGGTACTTCGGTTACTTAAGGTTGTAGTAACTAGTGAGTTTA
____________________________________________________________
consensus TATAGTTTGGGTCTATACAGGTACTTCGGTTACTTAAGGTTGTAGTAACTAGTGAGTTTA
. : . : . : . : . : . :
rJMSF016O19+ TGTTAGTGGACATGGGAATGTGTTTCTTATGCTTCAGGGAAAGGAGTTTGCTGCTCTTTT
rJMSF048H05+ TGTTAGTGGACATGGGAATGTGTTTCTTATGCTTCAGGGAAAGGAGTTTGCTGCTCTTTT
rJMSF042N07+ TGTTAGTGGACATGGGAATGTGTTTCTTATGCTTCAGGGAAAGGAG-TTGCTGCTCTTTT
rJMFF014F11+ TGTTAGTGGACATGGGAATGTGTTTCTTATGCTTCAGGGAAAGGAGTTTGCTGCTCTTTT
rJMFF028H03+ TGTTAGTGGACATGGGAATGTGTTTCTTATGCTTCAGGGAAAGGAGTTTGCTGCTCTTTT
rJMFF045M08+ TGTTAGTGGACATGGGAATGTGTTTCTTATGCTTCAGGGAAAGGAGTTTGCTGCTCTTTT
rJMFF049J02+ TGTTAGTGGACATGGGAATGTGTTTCTTATGCTTCAGGGAAAGGAGTTTGCTGCTCTTTT
rJMFF033H18+ TGTTAGTGGACATGGGAATGTGTTTCTTATGCTTCAGGGAAAGGAGTTTGCTGCTCTTTT
rJMSF030B23+ TGTTAGTGGACATGGGAATGTGTTTCTTATGCTTCAGGGAAAGGAGTTTGCTGCTCTTTT
____________________________________________________________
consensus TGTTAGTGGACATGGGAATGTGTTTCTTATGCTTCAGGGAAAGGAGTTTGCTGCTCTTTT
. : . : . : . : . : . :
rJMSF016O19+ TCCTTA
rJMSF048H05+ TCCTTAGTTAT
rJMSF042N07+ TCCTTAGTTATG
rJMFF014F11+ TCCTTAGTTATGTGCTAATGTTCAATTCAA
rJMFF028H03+ TCCTTAGTTATGTGCTAATGTTCAATTCAATAAAACAA
rJMFF045M08+ TCCTTAGTTATGTGCTAATGTTCAATTCAATAAAACAATGAC
rJMFF049J02+ TCCTTAGTTATGTGCTAATGTTCAATTCAATAAAAC
rJMFF033H18+ TCCTTAGTTATGTGCTAATGTTCAATTCAATAAAACAATGAC
rJMSF030B23+ TCCTTAGTTATGTGCTAATGTTCAATTCAATAAAACAATGACCAATGTGCTTGTAGTAAT
____________________________________________________________
consensus TCCTTAGTTATGTGCTAATGTTCAATTCAATAAAACAATGACCAATGTGCTTGTAGTAAT