Contig 001395:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF029H01Sequence124000807 (2)563001395 (2)ref|XP_004245651.1|4e-53PREDICTED: BAG family molecular chaperone regulator 3-like [Solanum lycopersicu
JMSF029I01Sequence124000807 (2)528001395 (2)ref|XP_004245651.1|2e-53PREDICTED: BAG family molecular chaperone regulator 3-like [Solanum lycopersicu

Alignment

This contig is upended


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rJMSF029H01+                                               TATGGTTCATCTCACCATGAAGT
                      ____________________________________________________________
consensus                                                  TATGGTTCATCTCACCATGAAGT
 
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rJMSF029I01+                        AGCAAATCTTGGGGATCAAATGAACAGAAAAGAGGTGCCCTGAAAT
rJMSF029H01+          CTACATTANTCCCAAGCAAATCTTGGGGATCAAATGAACAGAAAAGAGGTGCCCTGAAAT
                      ____________________________________________________________
consensus             CTACATTANTCCCAAGCAAATCTTGGGGATCAAATGAACAGAAAAGAGGTGCCCTGAAAT
 
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rJMSF029I01+          GTGCAGAACTGTGAAAATGGAGAACTCATCGAAGGAAATCACAGCAATCAGATTGGAAAT
rJMSF029H01+          GTGCAGAACTGTGAAAATGGAGAACTCATCGAAGGAAATCACAGCAATCAGATTGGAAAT
                      ____________________________________________________________
consensus             GTGCAGAACTGTGAAAATGGAGAACTCATCGAAGGAAATCACAGCAATCAGATTGGAAAT
 
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rJMSF029I01+          TGACAAGCTTGCAAAGCAGGTTGGAAATGTTGAAATGGACATCTATGGTGGCAAGAAAGT
rJMSF029H01+          TGACAAGCTTGCAAAGCAGGTTGGAAATGTTGAAATGGACATCTATGGTGGCAAGAAAGT
                      ____________________________________________________________
consensus             TGACAAGCTTGCAAAGCAGGTTGGAAATGTTGAAATGGACATCTATGGTGGCAAGAAAGT
 
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rJMSF029I01+          GGCAGAAATGGCAATATTGAACATGATTGAACTATTTATGACACAACTCATAAAATTAGA
rJMSF029H01+          GGCAGAAATGGCAATATTGAACATGATTGAACTATTTATGACACAACTCATAAAATTAGA
                      ____________________________________________________________
consensus             GGCAGAAATGGCAATATTGAACATGATTGAACTATTTATGACACAACTCATAAAATTAGA
 
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rJMSF029I01+          TGGAATTTCTGGTGATGGTAATGTGAAATTACAGAGAAGGATGGAGGTGAAGAGGGTGCA
rJMSF029H01+          TGGAATTTCTGGTGATGGTAATGTGAAATTACAGAGAAGGATGGAGGTGAAGAGGGTGCA
                      ____________________________________________________________
consensus             TGGAATTTCTGGTGATGGTAATGTGAAATTACAGAGAAGGATGGAGGTGAAGAGGGTGCA
 
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rJMSF029I01+          GAAGTACATTGAAAATCTTGATATGCTAAAGATAAGAAACTCAACACTGGGAAGCAATAA
rJMSF029H01+          GAAGTACATTGAAAATCTTGATATGCTAAAGATAAGAAACTCAACACTGGGAAGCAATAA
                      ____________________________________________________________
consensus             GAAGTACATTGAAAATCTTGATATGCTAAAGATAAGAAACTCAACACTGGGAAGCAATAA
 
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rJMSF029I01+          TGCCAGGGTGGCAGCTCATCAATTCCAGCAAGTGCACAACAAGTTAGCTGGCAGAAATAA
rJMSF029H01+          TGCCAGGGTGGCAGCTCATCAATTCCAGCAAGTGCACAACAAGTTAGCTGGCAGAAATAA
                      ____________________________________________________________
consensus             TGCCAGGGTGGCAGCTCATCAATTCCAGCAAGTGCACAACAAGTTAGCTGGCAGAAATAA
 
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rJMSF029I01+          TGAAGGGCCTATTAGAGTGACAGCAAAATGGGCAAACTTTTGAAATAATCATGGCAAACA
rJMSF029H01+          TGAAGGGCCTATTAGAGTGACAGCAAAATGGGCAAACTTTTGAAATAATCATGGCAAACA
                      ____________________________________________________________
consensus             TGAAGGGCCTATTAGAGTGACAGCAAAATGGGCAAACTTTTGAAATAATCATGGCAAACA
 
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rJMSF029I01+          CAAATTTAGTTCCAAAAATGGACAGTTAATGAAGCACTAATACACTATAATGATGCCTAT
rJMSF029H01+          CAAATTTAGTTCCAAAAATGGACAGTTAATGAAGCACTAATACACTATAATGATGCCTAT
                      ____________________________________________________________
consensus             CAAATTTAGTTCCAAAAATGGACAGTTAATGAAGCACTAATACACTATAATGATGCCTAT