Contig 001393:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005N15Sequence493005218 (7)ref|XP_009614819.1|137PREDICTED: uncharacterized protein LOC104107662 [Nicotiana tomentosiformis]746001393 (4)ref|XP_004230911.1|256PREDICTED: uncharacterized protein LOC101253631 [Solanum lycopersicum] ref|XP_01
JMFF012A19Sequence489005218 (7)ref|XP_009614819.1|149PREDICTED: uncharacterized protein LOC104107662 [Nicotiana tomentosiformis]702001393 (4)ref|XP_009765056.1|5e-29PREDICTED: flocculation protein FLO11 [Nicotiana sylvestris] ref|XP_009765062.1|
JMSF028O03Sequence665005218 (7)ref|XP_009614819.1|187PREDICTED: uncharacterized protein LOC104107662 [Nicotiana tomentosiformis]744001393 (4)ref|XP_009765056.1|7e-32PREDICTED: flocculation protein FLO11 [Nicotiana sylvestris] ref|XP_009765062.1|
JMSF035K04Sequence681005218 (7)ref|XP_009614819.1|191PREDICTED: uncharacterized protein LOC104107662 [Nicotiana tomentosiformis]712001393 (4)ref|XP_004230911.1|264PREDICTED: uncharacterized protein LOC101253631 [Solanum lycopersicum] ref|XP_01

Alignment

This contig is upended


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rJMSF035K04+                                                   CCTGCCTTTCCTGAATTCC
                      ____________________________________________________________
consensus                                                      CCTGCCTTTCCTGAATTCC
 
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rJMFF005N15+                     CGCAGAGATAGGTGGTCTTTTGATAGTGAAAGCTTTGGCTTCCTTTGTG
rJMSF035K04+          TACAAACTTCTCGCAGAGATAGGTGGTCTTTTGATAGTGAAAGCTTTGGCTTCCTTTGTG
                      ____________________________________________________________
consensus             TACAAACTTCTCGCAGAGATAGGTGGTCTTTTGATAGTGAAAGCTTTGGCTTCCTTTGTG
 
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rJMFF005N15+          ACAAAGTAACCAGATCTAGTGGAAGAACTTCTGGTTCACCCTCTTTAGATCTCCGGACAT
rJMSF035K04+          ACAAAGTAACCAGATCTAGTGGAAGAACTTCTGGTTCACCCTCTTTAGATCTCCGGACAT
                      ____________________________________________________________
consensus             ACAAAGTAACCAGATCTAGTGGAAGAACTTCTGGTTCACCCTCTTTAGATCTCCGGACAT
 
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rJMFF005N15+          GTGGCATTTGTGGAAAGCTGCTAACTGAGAAATCTTCATGGTGTGGTCGGAAAGGTATAG
rJMSF035K04+          GTGGCATTTGTGGAAAGCTGCTAACTGAGAAATCTTCATGGTGTGGTCGGAAAGGTATAG
                      ____________________________________________________________
consensus             GTGGCATTTGTGGAAAGCTGCTAACTGAGAAATCTTCATGGTGTGGTCGGAAAGGTATAG
 
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rJMFF005N15+          AATCTAATGAAATTGCTGTTGTTGCTGTTCTGACATGTGGACATGTTTTCCATGCTGAGT
rJMSF035K04+          AATCTAATGAAATTGCTGTTGTTGCTGTTCTGACATGTGGACATGTTTTCCATGCTGAGT
                      ____________________________________________________________
consensus             AATCTAATGAAATTGCTGTTGTTGCTGTTCTGACATGTGGACATGTTTTCCATGCTGAGT
 
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rJMFF005N15+          GCTTGGAGAATATGACATTGGAAATCAACAAGTATGACCCGGCTTGCCCTGTCTGTACAT
rJMSF035K04+          GCTTGGAGAATATGACATTGGAAATCAACAAGTATGACCCGGCTTGCCCTGTCTGTACAT
rJMSF028O03+                                             GACCCGGCTTGCCCTGTCTGTACA-
                      ____________________________________________________________
consensus             GCTTGGAGAATATGACATTGGAAATCAACAAGTATGACCCGGCTTGCCCTGTCTGTACAT
 
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rJMFF005N15+          TTGGGGAGAAGCAAGTGTTGAAGATGTCCGAGAAGGGCTTGAAAGCAGAGATGAATTCAA
rJMSF035K04+          TTGGGGAGAAGCAAGTGTTGAAGATGTCCGAGAAGGGCTTGAAAGCAGAGATGAATTCAA
rJMFF012A19+               GAGAAGCAAGTGTTGAAGATGTCCGAGAAGGGCTTGAAAGCAGAGATGAATTCAA
rJMSF028O03+          TTGGGGAGAAGCAAGTGTTGAAGATGTCCGAGAAGGGCTTGAAAGCAGAGATGAATTCAA
                      ____________________________________________________________
consensus             TTGGGGAGAAGCAAGTGTTGAAGATGTCCGAGAAGGGCTTGAAAGCAGAGATGAATTCAA
 
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rJMFF005N15+          AAGCTAGAAAGAGATACAGGAATCGAGTTGTTGATAGCGATTATAATGAAAACCTTGCCA
rJMSF035K04+          AAGCTAGAAAGAGATACAGGAATCGAGTTGTTGATAGCGATTATAATGAAAACCTTGCCA
rJMFF012A19+          AAGCTAGAAAGAGATACAGGAATCGAGTTGTTGATAGCGATTATAATGAAAACCTTGCCA
rJMSF028O03+          AAGCTAGAAAGAGATACAGGAATCGAGTTGTTGATAGCGATTATAATGAAAACCTTGCCA
                      ____________________________________________________________
consensus             AAGCTAGAAAGAGATACAGGAATCGAGTTGTTGATAGCGATTATAATGAAAACCTTGCCA
 
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rJMFF005N15+          TGTTAGAGCACAACCAGAAAAGTAGTGGACATGTGGGGAGGTGTCCCAAGATGAGCCCAA
rJMSF035K04+          TGTTAGAGCACAACCAGAAAAGTAGTGGACATGTGGGGAGGTGTCCCAAGATGAGCCCAA
rJMFF012A19+          TGTTAGAGCACAACCAGAAAAGTAGTGGACATGTGGGGAGGTGTCCCAAGATGAGCCCAA
rJMSF028O03+          TGTTAGAGCACAACCAGAAAAGTAGTGGACATGTGGGGAGGTGTCCCAAGATGAGCCCAA
                      ____________________________________________________________
consensus             TGTTAGAGCACAACCAGAAAAGTAGTGGACATGTGGGGAGGTGTCCCAAGATGAGCCCAA
 
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rJMFF005N15+          GTTCAAGCATGAAGTTTTCTTCTGGGAAGCCATTACTGGGACGCCATTTTTCATTTGTAT
rJMSF035K04+          GTTCAAGCATGAAGTTTTCTTCTGGAAAGCCATTACTGGGACGCCATTTTTCATTTGTAT
rJMFF012A19+          GTTCAAGCATGAAGTTTTCTTCTGGAAAGCCATTACTGGGACGCCATTTTTCATTTGTAT
rJMSF028O03+          GTTCAAGCATGAAGTTTTCTTCTGGAAAGCCATTACTGGGACGCCATTTTTCATTTGTAT
                      ____________________________________________________________
consensus             GTTCAAGCATGAAGTTTTCTTCTGGAAAGCCATTACTGGGACGCCATTTTTCATTTGTAT
 
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rJMFF005N15+          CAAAGGGGACAAGAACCTTGTCCGAGAGTAATTCTACTCGGAAGAAGGGGTTTTTCTGGA
rJMSF035K04+          CAAAGGGGACAAGAACCTTGTCCGAGAGTAATTCTACTCGGAAGAAGGGGTTTTTCTGGA
rJMFF012A19+          CAAAGGGGACAAGAACCTTGCCCGAGAGTAATTCTACTCGGAAGAAGGGGTTTTTCTGGA
rJMSF028O03+          CAAAGGGGACAAGAACCTTGTCCGAGAGTAATTCTACTCGGAAGAAGGGGTTTTTCTGGA
                      ____________________________________________________________
consensus             CAAAGGGGACAAGAACCTTGTCCGAGAGTAATTCTACTCGGAAGAAGGGGTTTTTCTGGA
 
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rJMFF005N15+          CAAGATCTAGCAAGGAGAAAGCTTCTTCCTGGAAACAATAG                   
rJMSF035K04+          CAAGATCTAGCAAGGAGAAAGCTTCTTCCTGGAAACAATAGTTAAGCAGCATGTTTGTAC
rJMFF012A19+          CAAGATCTAGCAAGGAGAAAGCTTCTTCCTGGAAACAATAGTTAAGCAGCATGTTTGTAC
rJMSF028O03+          CAAGATCTAGCAAGGAGAAAGCTTCTTCCTGGAAACAATAGTTAAGCAGCATGTTTGTAC
                      ____________________________________________________________
consensus             CAAGATCTAGCAAGGAGAAAGCTTCTTCCTGGAAACAATAGTTAAGCAGCATGTTTGTAC
 
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rJMSF035K04+          TTCTGAAATTTTTTTCCTTGTCACATTCAATCA                           
rJMFF012A19+          TTCTGAAATTTTTTTCCTTGTCACATTCAATCATGCTATGGTCGCACTTCCTTTTATTGC
rJMSF028O03+          TTCTGAAATTTTTTTCCTTGTCACATTCAATCATGCTATGGTCGCACTTCCTTTTATTGC
                      ____________________________________________________________
consensus             TTCTGAAATTTTTTTCCTTGTCACATTCAATCATGCTATGGTCGCACTTCCTTTTATTGC
 
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rJMFF012A19+          GTTTGGTTTTTAAATTACTATTCTCCGACACTCGATTTACAGATATTCAATGTGTGATCT
rJMSF028O03+          GTTTGGTTTTTAAATTACTATTCTCCGACACTCGATTTACAGATATTCAATGTGTGATCT
                      ____________________________________________________________
consensus             GTTTGGTTTTTAAATTACTATTCTCCGACACTCGATTTACAGATATTCAATGTGTGATCT
 
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rJMFF012A19+          TGCAATCTTGCATTGCTACTTGGCCGGTAGTTGGAGGCGTGGCAAGAAGTCAATTGAAGA
rJMSF028O03+          TGCAATCTTGCATTGCTACTTGGCCGGTAGTTGGAGGCGTGGCAAGAAGTCAATTGAAGA
                      ____________________________________________________________
consensus             TGCAATCTTGCATTGCTACTTGGCCGGTAGTTGGAGGCGTGGCAAGAAGTCAATTGAAGA
 
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rJMFF012A19+          CCTTACAAAGACAAAGGGATGACTAAATTGTTTTGCTGGCAGATTTAGGTTAGCTTCTTT
rJMSF028O03+          CCTTACAAAGACAAAGGGATGACTAAATTGTTTTGCTGGCAGATTTAGGTTAGCTTCTTT
                      ____________________________________________________________
consensus             CCTTACAAAGACAAAGGGATGACTAAATTGTTTTGCTGGCAGATTTAGGTTAGCTTCTTT
 
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rJMFF012A19+          CTGAAGATACAATGTAAAGAGAATTGAAGGGGAAGGAATAGAGATGGAAGGGTATGAATT
rJMSF028O03+          CTGAAGATACAATGTAAAGAGAATTGAAGGGGAAGGAATAGAGATGGAAGGGTATGAATT
                      ____________________________________________________________
consensus             CTGAAGATACAATGTAAAGAGAATTGAAGGGGAAGGAATAGAGATGGAAGGGTATGAATT
 
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rJMFF012A19+          CAATATAGTAAAAAGGGAATTTATAACGGCAAGTTATTTTCTGTCTT             
rJMSF028O03+          CAATATAGTAAAAAGGGAATTTATAACGGCAAGTTATTTTCTGTCTTTGTACATTCAATT
                      ____________________________________________________________
consensus             CAATATAGTAAAAAGGGAATTTATAACGGCAAGTTATTTTCTGTCTTTGTACATTCAATT