Contig 001391:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF013M24Sequence257003712 (2)713001391 (2)ref|XP_011077870.1|5e-85PREDICTED: probable cytosolic iron-sulfur protein assembly protein CIAO1 homolo
JMSF028B20Sequence646003712 (2)ref|XP_011077870.1|6e-52PREDICTED: probable cytosolic iron-sulfur protein assembly protein CIAO1 homolo715001391 (2)ref|XP_011077870.1|6e-85PREDICTED: probable cytosolic iron-sulfur protein assembly protein CIAO1 homolo

Alignment

This contig is upended


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rJMSF013M24+              TTTTCATGCAGTTATGATAACACGATCAAGGTTTGGGCAGAGGAAGGTGATAGTGA
rJMSF028B20+              TTTTCATGCAGTTATGATAACACGATCAAGGTTTGGGCAGAGGAAGGTGATAGTGA
                      ____________________________________________________________
consensus                 TTTTCATGCAGTTATGATAACACGATCAAGGTTTGGGCAGAGGAAGGTGATAGTGA
 
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rJMSF013M24+          TGATTGGCATTGCATTCAAACTTTAGCTGAATCTAGCAGTGGTCATACATCAACAGTTTG
rJMSF028B20+          TGATTGGCATTGCATTCAAACTTTAGCTGAATCTAGCAGTGGTCATACATCAACAGTTTG
                      ____________________________________________________________
consensus             TGATTGGCATTGCATTCAAACTTTAGCTGAATCTAGCAGTGGTCATACATCAACAGTTTG
 
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rJMSF013M24+          GGCTCTCTCTTTTAATTTCACTGGAGATAAAATGGTTACCTGTAGTGATGACCTTACCCT
rJMSF028B20+          GGCTCTCTCTTTTAATTTCACTGGAGATAAAATGGTTACCTGTAGTGATGACCTTACCCT
                      ____________________________________________________________
consensus             GGCTCTCTCTTTTAATTTCACTGGAGATAAAATGGTTACCTGTAGTGATGACCTTACCCT
 
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rJMSF013M24+          AAAGATATGGAGTGCTGACATAGCAAGGTTGCAGTCTGGTGATGTAAATGCACCTTGGAG
rJMSF028B20+          AAAGATATGGAGTGCTGACATAGCAAGGTTGCAGTCTGGTGATGTAAATGCACCTTGGAG
                      ____________________________________________________________
consensus             AAAGATATGGAGTGCTGACATAGCAAGGTTGCAGTCTGGTGATGTAAATGCACCTTGGAG
 
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rJMSF013M24+          GCATATTAGCACTCTCTCTGGGTACCATGATAGAACAGTTTTTTCAGTACATTGGTCAAG
rJMSF028B20+          GCATATTAGCACTCTCTCTGGGTACCATGATAGAACAGTTTTTTCAGTACATTGGTCAAG
                      ____________________________________________________________
consensus             GCATATTAGCACTCTCTCTGGGTACCATGATAGAACAGTTTTTTCAGTACATTGGTCAAG
 
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rJMSF013M24+          AGAAGGAATAATTGCCAGTGGAGCAGCTGATGATGCTATACGCATATTTGTTGAGAATGA
rJMSF028B20+          AGAAGGAATAATTGCCAGTGGAGCAGCTGATGATGCTATACGCATATTTGTTGAGAATGA
                      ____________________________________________________________
consensus             AGAAGGAATAATTGCCAGTGGAGCAGCTGATGATGCTATACGCATATTTGTTGAGAATGA
 
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rJMSF013M24+          AGACAAATCGGTTGATGGACCTACATACAGCTTACTTTTGAAGAAGGAAAAGGCTCATGA
rJMSF028B20+          AGACAAATCGGTTGATGGACCTACATACAGCTTACTTTTGAAGAAGGAAAAGGCTCATGA
                      ____________________________________________________________
consensus             AGACAAATCGGTTGATGGACCTACATACAGCTTACTTTTGAAGAAGGAAAAGGCTCATGA
 
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rJMSF013M24+          AATGGATGTAAATGCTGTGCAGTGGAACACTGCAGCAGATAAGAGGTTACTTGCTTCAGC
rJMSF028B20+          AATGGATGTAAATGCTGTGCAGTGGAACACTGCAGCAGATAAGAGGTTACTTGCTTCAGC
                      ____________________________________________________________
consensus             AATGGATGTAAATGCTGTGCAGTGGAACACTGCAGCAGATAAGAGGTTACTTGCTTCAGC
 
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rJMSF013M24+          TAGTGATGACGGGACAATCAAGATATGGGAATTGGCTCCTCAATCTGGAGGCGAAGGACT
rJMSF028B20+          TAGTGATGACGGGACAATCAAGATATGGGAATTGGCTCCTCAATCTGGAGGCGAAGGACT
                      ____________________________________________________________
consensus             TAGTGATGACGGGACAATCAAGATATGGGAATTGGCTCCTCAATCTGGAGGCGAAGGACT
 
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rJMSF013M24+          ATCATTGTAGTCTTATAATAGAGATACGCGTGCGCTAAGGAATTTTCCTGCCCCCCTTTT
rJMSF028B20+          ATCATTGTAGTCTTATAATAGAGATACGCGTGCGCTAAGGAATTTTCCTGCCCCCCTTTT
                      ____________________________________________________________
consensus             ATCATTGTAGTCTTATAATAGAGATACGCGTGCGCTAAGGAATTTTCCTGCCCCCCTTTT
 
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rJMSF013M24+          TGAGCAATTTGTATTTTCTTTCGGGTTTGCTTTGAAATCTGTATCTTCAAATTTATACCT
rJMSF028B20+          TGAGCAATTTGTATTTTCTTTCGGGTTTGCTTTGAAATCTGTATCTTCAAATTTATACCT
                      ____________________________________________________________
consensus             TGAGCAATTTGTATTTTCTTTCGGGTTTGCTTTGAAATCTGTATCTTCAAATTTATACCT
 
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rJMSF013M24+          GTGTAATTTATAAATTCACATATTTCACCATGATATGGTTTGGCAGGAAAC         
rJMSF028B20+          GTGTAATTTATAAATTCACATATTTCA-CATGATATGGTTTGGCAGGAAACAGAGTAACT
                      ____________________________________________________________
consensus             GTGTAATTTATAAATTCACATATTTCACCATGATATGGTTTGGCAGGAAACAGAGTAACT