Contig 001386:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN032P01Sequence568001386 (3)ref|XP_009598339.1|5e-16PREDICTED: EH domain-containing protein 1-like isoform X3 [Nicotiana tomentosif
JMSF003G16Sequence388020959ref|XP_011081944.1|8e-39PREDICTED: protein tesmin/TSO1-like CXC 2 [Sesamum indicum]777001386 (3)ref|XP_004245198.2|9e-32PREDICTED: protein tesmin/TSO1-like CXC 4 [Solanum lycopersicum]
JMSF027B08Sequence678014681ref|XP_004245198.2|4e-22PREDICTED: protein tesmin/TSO1-like CXC 4 [Solanum lycopersicum]756001386 (3)ref|XP_004245198.2|4e-31PREDICTED: protein tesmin/TSO1-like CXC 4 [Solanum lycopersicum]

Alignment

This contig is upended


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JMFN032P01+                                                          GACGAGACAAGTT
                      ____________________________________________________________
consensus                                                            GACGAGACAAGTT
 
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JMFN032P01+           GGCCATGCCGAAGAATTTCGTGGCGTCGGTTCCGGTGATGCGTCCATCTCCATCTGAATC
                      ____________________________________________________________
consensus             GGCCATGCCGAAGAATTTCGTGGCGTCGGTTCCGGTGATGCGTCCATCTCCATCTGAATC
 
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JMFN032P01+           AGCGCAGGCGAACCATTCCTTATATGTCTTCTCGTGTTCTTTGGAGCAGCGGTTAATCGG
                      ____________________________________________________________
consensus             AGCGCAGGCGAACCATTCCTTATATGTCTTCTCGTGTTCTTTGGAGCAGCGGTTAATCGG
 
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JMFN032P01+           AGCATCATCGATGTCCAGGAACGACTCCCTTCCTTTTGAACTGCTATTATCCAGCGTCTT
                      ____________________________________________________________
consensus             AGCATCATCGATGTCCAGGAACGACTCCCTTCCTTTTGAACTGCTATTATCCAGCGTCTT
 
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JMFN032P01+           CCCCTTTGAATCCTCCCTTTTGAAACTAGCTCGAAAACTGTTCATCATCTTCAAACAATT
                      ____________________________________________________________
consensus             CCCCTTTGAATCCTCCCTTTTGAAACTAGCTCGAAAACTGTTCATCATCTTCAAACAATT
 
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JMFN032P01+           CACTCAGCCTCGCCGGAGAAGTTACTGTATGTATGTTCGTCTGTTCCCTCCACCACGTTT
                      ____________________________________________________________
consensus             CACTCAGCCTCGCCGGAGAAGTTACTGTATGTATGTTCGTCTGTTCCCTCCACCACGTTT
 
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JMFN032P01+           AGTTAATACAAAATTGGGACCAAAGAATTTTATGAGTCTATCAACTCTGATAAGAGCTCA
rJMSF003G16+                        TGGGACCAAAGAATTTTATGAGTCTATCAACTCTGATAAGAGCTCA
rJMSF027B08+                        TGGGACCAAAGAATTTTATGAGTCTATCAACTCTGATAAGAGCTCA
                      ____________________________________________________________
consensus             AGTTAATACAAAATTGGGACCAAAGAATTTTATGAGTCTATCAACTCTGATAAGAGCTCA
 
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JMFN032P01+           TTTAATGCGATTGAAGATGACACACCAGAGATACTGAAGGATGCTTCTACTCCACCCCGG
rJMSF003G16+          TTTAATGCGATTGAAGATGACACACCAGAGATACTGAAGGATGCTTCTACTCCACCCCGG
rJMSF027B08+          TTTAATGCGATTGAAGATGACACACCAGAGATACTGAAGGATGCTTCTACTCCACCCCGG
                      ____________________________________________________________
consensus             TTTAATGCGATTGAAGATGACACACCAGAGATACTGAAGGATGCTTCTACTCCACCCCGG
 
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JMFN032P01+           GGCGTGAAAGTAAGCTCCCCAAATAAGAAGCGGGTTTCTCCCCCTCATGATCGCCTGAAA
rJMSF003G16+          GGCGTGAAAGTAAGCTCCCCAAATAAGAAGCGGGTTTCTCCCCCTCATGATCGCCTGAAA
rJMSF027B08+          GGCGTGAAAGTAAGCTCCCCAAATAAGAAGCGGGTTTCTCCCCCTCATGATCGCCTGAAA
                      ____________________________________________________________
consensus             GGCGTGAAAGTAAGCTCCCCAAATAAGAAGCGGGTTTCTCCCCCTCATGATCGCCTGAAA
 
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JMFN032P01+           GATCCTGATGGTAGCTCATCTGCTCGGCGCCTGAAAGCTGGCCGGAAATATAAATTAGGG
rJMSF003G16+          GATCCTGATGGTAGCTCATCTGCTCGGCGCCTGAAAGCTGGCCGGAAATATAAATTAGGG
rJMSF027B08+          GATCCTGATGGTAGCTCATCTGCTCGGCGCCTGAAAGCTGGCCGGAAATATAAATTAGGG
                      ____________________________________________________________
consensus             GATCCTGATGGTAGCTCATCTGCTCGGCGCCTGAAAGCTGGCCGGAAATATAAATTAGGG
 
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JMFN032P01+           TCTGTTCCTTCTTTC                                             
rJMSF003G16+          TCTGTTCCTTCTTTCCCCCCTCTTACGCCATGCTTTGTTTCTAAAGGCAGCAGTGAAGGT
rJMSF027B08+          TCTGTTCCTTCTTTCCCCCCTCTTACGCCATGCTTTGTTTCTAAAGGCAGCAGTGAAGGT
                      ____________________________________________________________
consensus             TCTGTTCCTTCTTTCCCCCCTCTTACGCCATGCTTTGTTTCTAAAGGCAGCAGTGAAGGT
 
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rJMSF003G16+          CAGATTAAAAATGATCCTCAGAAACCTAGTAGCAGCACTTGATTCAAACCAGGAAAGGAT
rJMSF027B08+          CAGATTAAAAATGATCCTCAGAAACCTAGTAGCAGCACTTGATTCAAACCAGGAAAGGAT
                      ____________________________________________________________
consensus             CAGATTAAAAATGATCCTCAGAAACCTAGTAGCAGCACTTGATTCAAACCAGGAAAGGAT
 
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rJMSF003G16+          CCACGGTGCAGTGTTAGCCCTGTGACCTAATTGAAAAGGAGGAGGTTGTCTTGTATTGAT
rJMSF027B08+          CCACGGTGCAATGTTAGCCCTGTGACCTAATTGAAAAGGAGGAGGTTGTCTTGTATTGAT
                      ____________________________________________________________
consensus             CCACGGTGCAGTGTTAGCCCTGTGACCTAATTGAAAAGGAGGAGGTTGTCTTGTATTGAT
 
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rJMSF003G16+          CAAACTCAAGTGTCAAATTGAAGATGCTCAAGTTGGTTAGTAGCGCACTTTTTTCTTCAT
rJMSF027B08+          CAAACTCAAGTGTCAAATTGAAGATGCTCAAGTTGGTTAGTAGCGCACTTTTTTCTTCAT
                      ____________________________________________________________
consensus             CAAACTCAAGTGTCAAATTGAAGATGCTCAAGTTGGTTAGTAGCGCACTTTTTTCTTCAT
 
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rJMSF003G16+          CGTATCTATTGTGATTCTTTATAGCCTGCAGCAATCGGTTTTATATTAGTCGATATATAT
rJMSF027B08+          CGTATCTATTGTGATTCTTTATAGCCTGCAGCAATCGGTTTTATATTAGTCGATATATAT
                      ____________________________________________________________
consensus             CGTATCTATTGTGATTCTTTATAGCCTGCAGCAATCGGTTTTATATTAGTCGATATATAT
 
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rJMSF003G16+          GCTGCTGTATTATTTCTAC                                         
rJMSF027B08+          GCTGCTGTATTATTTCTACAGTTGTAAACTGATGATAGCAGGCAACCATTGTACCTTGCT
                      ____________________________________________________________
consensus             GCTGCTGTATTATTTCTACAGTTGTAAACTGATGATAGCAGGCAACCATTGTACCTTGCT